RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 NAP1L5Q96NT1 182 aaPredicted RBP14.84□□□□□ -0.03
UBE3D-206ENST00000505226 CLTCQ00610 1675 aaKnown RBP14.83□□□□□ -0.03
UBE3D-206ENST00000505226 CDC42BPGQ6DT37 1551 aa14.83□□□□□ -0.03
UBE3D-206ENST00000505226 GSPT1P15170 499 aaKnown RBP14.83□□□□□ -0.03
UBE3D-206ENST00000505226 MBIPQ9NS73 344 aa14.83□□□□□ -0.03
UBE3D-206ENST00000505226 PTCH1Q13635 1447 aa14.83□□□□□ -0.04
UBE3D-206ENST00000505226 K7ELQ4 463 aaPredicted RBP14.83□□□□□ -0.04
UBE3D-206ENST00000505226 NFE2L2Q16236 605 aa14.83□□□□□ -0.04
UBE3D-206ENST00000505226 ABCC4O15439 1325 aa14.82□□□□□ -0.04
UBE3D-206ENST00000505226 ARHGEF40Q8TER5 1519 aa14.82□□□□□ -0.04
UBE3D-206ENST00000505226 ESPNB1AK53 854 aa14.82□□□□□ -0.04
UBE3D-206ENST00000505226 HDGFL2Q7Z4V5 671 aaPredicted RBP14.82□□□□□ -0.04
UBE3D-206ENST00000505226 C8orf58Q8NAV2 365 aa14.82□□□□□ -0.04
UBE3D-206ENST00000505226 ARHGAP45Q92619 1136 aa14.82□□□□□ -0.04
UBE3D-206ENST00000505226 ZNF853P0CG23 659 aa14.81□□□□□ -0.04
UBE3D-206ENST00000505226 GBP4Q96PP9 640 aa14.81□□□□□ -0.04
UBE3D-206ENST00000505226 EMILIN1Q9Y6C2 1016 aa14.81□□□□□ -0.04
UBE3D-206ENST00000505226 KIF20BQ96Q89 1820 aa14.81□□□□□ -0.04
UBE3D-206ENST00000505226 ZNF428Q96B54 188 aa14.81□□□□□ -0.04
UBE3D-206ENST00000505226 TMEM131LA2VDJ0 1609 aa14.81□□□□□ -0.04
UBE3D-206ENST00000505226 ARHGAP31Q2M1Z3 1444 aa14.8□□□□□ -0.04
UBE3D-206ENST00000505226 HSP90AA1P07900 732 aaKnown RBP14.8□□□□□ -0.04
UBE3D-206ENST00000505226 C16orf71Q8IYS4 520 aaPredicted RBP14.8□□□□□ -0.04
UBE3D-206ENST00000505226 ZRANB1Q9UGI0 708 aa14.8□□□□□ -0.04
UBE3D-206ENST00000505226 ISY1Q9ULR0 285 aaKnown RBP14.8□□□□□ -0.04
UBE3D-206ENST00000505226 AK9Q5TCS8 1911 aa14.8□□□□□ -0.04
UBE3D-206ENST00000505226 KNDC1Q76NI1 1749 aa14.8□□□□□ -0.04
UBE3D-206ENST00000505226 SLC52A1Q9NWF4 448 aa14.8□□□□□ -0.04
UBE3D-206ENST00000505226 FAM83GA6ND36 823 aa14.79□□□□□ -0.04
UBE3D-206ENST00000505226 WAPLQ7Z5K2 1190 aa14.79□□□□□ -0.04
UBE3D-206ENST00000505226 PLEKHM2Q8IWE5 1019 aa14.79□□□□□ -0.04
UBE3D-206ENST00000505226 MAP2P11137 1827 aaKnown RBP14.79□□□□□ -0.04
UBE3D-206ENST00000505226 DIP2CQ9Y2E4 1556 aa14.79□□□□□ -0.04
UBE3D-206ENST00000505226 FBXO31Q5XUX0 539 aaPredicted RBP14.79□□□□□ -0.04
UBE3D-206ENST00000505226 IL13P35225 146 aa14.79□□□□□ -0.04
UBE3D-206ENST00000505226 IFT57Q9NWB7 429 aa14.79□□□□□ -0.04
UBE3D-206ENST00000505226 TWISTNBQ3B726 338 aaPredicted RBP14.78□□□□□ -0.04
UBE3D-206ENST00000505226 DCTN1Q14203 1278 aa14.78□□□□□ -0.04
UBE3D-206ENST00000505226 OTUD7AQ8TE49 926 aaPredicted RBP14.77□□□□□ -0.04
UBE3D-206ENST00000505226 CDC45O75419 566 aa14.77□□□□□ -0.04
UBE3D-206ENST00000505226 GNAI1P63096 354 aa14.77□□□□□ -0.04
UBE3D-206ENST00000505226 SKOR2Q2VWA4 1001 aaPredicted RBP14.77□□□□□ -0.04
UBE3D-206ENST00000505226 ALKQ9UM73 1620 aa14.77□□□□□ -0.05
UBE3D-206ENST00000505226 BAG4O95429 457 aaKnown RBP14.77□□□□□ -0.05
UBE3D-206ENST00000505226 PKP1Q13835 747 aa14.77□□□□□ -0.05
UBE3D-206ENST00000505226 CLEC17AQ6ZS10 378 aa14.77□□□□□ -0.05
UBE3D-206ENST00000505226 NPM1P06748 294 aaKnown RBP eCLIP14.76□□□□□ -0.05
UBE3D-206ENST00000505226 YEATS2Q9ULM3 1422 aa14.76□□□□□ -0.05
UBE3D-206ENST00000505226 NME9Q86XW9 330 aa14.76□□□□□ -0.05
UBE3D-206ENST00000505226 DLG5Q8TDM6 1919 aa14.75□□□□□ -0.05
UBE3D-206ENST00000505226 KRT24Q2M2I5 525 aa14.75□□□□□ -0.05
UBE3D-206ENST00000505226 CFAP44Q96MT7 982 aa14.75□□□□□ -0.05
UBE3D-206ENST00000505226 DCTPP1Q9H773 170 aa14.75□□□□□ -0.05
UBE3D-206ENST00000505226 PREX1Q8TCU6 1659 aa14.74□□□□□ -0.05
UBE3D-206ENST00000505226 USP26Q9BXU7 913 aa14.74□□□□□ -0.05
UBE3D-206ENST00000505226 TTC22Q5TAA0 569 aa14.74□□□□□ -0.05
UBE3D-206ENST00000505226 RRS1Q15050 365 aaKnown RBP14.73□□□□□ -0.05
UBE3D-206ENST00000505226 CHMP4BQ9H444 224 aaKnown RBP14.73□□□□□ -0.05
UBE3D-206ENST00000505226 NCKAP5LQ9HCH0 1330 aa14.73□□□□□ -0.05
UBE3D-206ENST00000505226 TRIM44Q96DX7 344 aaPredicted RBP14.73□□□□□ -0.05
UBE3D-206ENST00000505226 DDX49Q9Y6V7 483 aaKnown RBP14.73□□□□□ -0.05
UBE3D-206ENST00000505226 KLHL40Q2TBA0 621 aa14.72□□□□□ -0.05
UBE3D-206ENST00000505226 CYP2E1P05181 493 aaPredicted RBP14.72□□□□□ -0.05
UBE3D-206ENST00000505226 CALD1Q05682 793 aaKnown RBP14.72□□□□□ -0.05
UBE3D-206ENST00000505226 SMARCA5O60264 1052 aaPredicted RBP14.72□□□□□ -0.05
UBE3D-206ENST00000505226 API5Q9BZZ5 524 aaKnown RBP14.72□□□□□ -0.05
UBE3D-206ENST00000505226 ATP10DQ9P241 1426 aa14.71□□□□□ -0.05
UBE3D-206ENST00000505226 NASPP49321 788 aaPredicted RBP14.71□□□□□ -0.05
UBE3D-206ENST00000505226 CHAMP1Q96JM3 812 aa14.71□□□□□ -0.05
UBE3D-206ENST00000505226 PPP1R9BQ96SB3 815 aa14.71□□□□□ -0.05
UBE3D-206ENST00000505226 RGS12O14924 1447 aa14.71□□□□□ -0.05
UBE3D-206ENST00000505226 RIMS2Q9UQ26 1411 aa14.71□□□□□ -0.05
UBE3D-206ENST00000505226 MCTP1Q6DN14 999 aa14.71□□□□□ -0.05
UBE3D-206ENST00000505226 RABEP1Q15276 862 aa14.7□□□□□ -0.06
UBE3D-206ENST00000505226 ATP7BP35670 1465 aa14.7□□□□□ -0.06
UBE3D-206ENST00000505226 SDSP20132 328 aa14.7□□□□□ -0.06
UBE3D-206ENST00000505226 ZGPATQ8N5A5 531 aaKnown RBP14.7□□□□□ -0.06
UBE3D-206ENST00000505226 LMBRD1Q9NUN5 540 aa14.7□□□□□ -0.06
UBE3D-206ENST00000505226 APBB1O00213 710 aa14.7□□□□□ -0.06
UBE3D-206ENST00000505226 PTMSP20962 102 aa14.7□□□□□ -0.06
UBE3D-206ENST00000505226 INTS3Q68E01 1043 aaKnown RBP14.7□□□□□ -0.06
UBE3D-206ENST00000505226 CPSF1Q10570 1443 aaKnown RBP14.7□□□□□ -0.06
UBE3D-206ENST00000505226 REREQ9P2R6 1566 aa14.69□□□□□ -0.06
UBE3D-206ENST00000505226 AEBP1Q8IUX7 1158 aa14.69□□□□□ -0.06
UBE3D-206ENST00000505226 ANKRD44Q8N8A2 993 aa14.69□□□□□ -0.06
UBE3D-206ENST00000505226 ZDHHC9Q9Y397 364 aa14.69□□□□□ -0.06
UBE3D-206ENST00000505226 NEO1Q92859 1461 aa14.69□□□□□ -0.06
UBE3D-206ENST00000505226 CEP85Q6P2H3 762 aa14.68□□□□□ -0.06
UBE3D-206ENST00000505226 CDK12Q9NYV4 1490 aaPredicted RBP14.68□□□□□ -0.06
UBE3D-206ENST00000505226 IBTKQ9P2D0 1353 aaPredicted RBP14.68□□□□□ -0.06
UBE3D-206ENST00000505226 RICTORQ6R327 1708 aa14.68□□□□□ -0.06
UBE3D-206ENST00000505226 CCDC173Q0VFZ6 552 aa14.68□□□□□ -0.06
UBE3D-206ENST00000505226 CAVIN1Q6NZI2 390 aaKnown RBP14.68□□□□□ -0.06
UBE3D-206ENST00000505226 CPS1P31327 1500 aa14.68□□□□□ -0.06
UBE3D-206ENST00000505226 GOLGA6L22H0YM25 854 aa14.68□□□□□ -0.06
UBE3D-206ENST00000505226 ZSCAN23Q3MJ62 389 aa14.67□□□□□ -0.06
UBE3D-206ENST00000505226 HSP90AA2PQ14568 343 aaPredicted RBP14.67□□□□□ -0.06
UBE3D-206ENST00000505226 KIF24Q5T7B8 1368 aa14.67□□□□□ -0.06
UBE3D-206ENST00000505226 ZNF445P59923 1031 aa14.67□□□□□ -0.06
UBE3D-206ENST00000505226 MEIS3Q99687 375 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms