RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 ZNF330Q9Y3S2 320 aaPredicted RBP7.91□□□□□ -1.14
LINC01088-202ENST00000505149 ESPNB1AK53 854 aa7.9□□□□□ -1.14
LINC01088-202ENST00000505149 NR3C2P08235 984 aa7.9□□□□□ -1.14
LINC01088-202ENST00000505149 ARID5BQ14865 1188 aa7.9□□□□□ -1.14
LINC01088-202ENST00000505149 KCTD15Q96SI1 283 aaPredicted RBP7.9□□□□□ -1.14
LINC01088-202ENST00000505149 FSHRP23945 695 aa7.89□□□□□ -1.15
LINC01088-202ENST00000505149 DZIP3Q86Y13 1208 aaKnown RBP7.89□□□□□ -1.15
LINC01088-202ENST00000505149 COG6Q9Y2V7 657 aa7.89□□□□□ -1.15
LINC01088-202ENST00000505149 ST8SIA5O15466 376 aa7.88□□□□□ -1.15
LINC01088-202ENST00000505149 TIMP2P16035 220 aa7.88□□□□□ -1.15
LINC01088-202ENST00000505149 DHX9Q08211 1270 aaKnown RBP7.88□□□□□ -1.15
LINC01088-202ENST00000505149 CCDC116Q8IYX3 515 aa7.88□□□□□ -1.15
LINC01088-202ENST00000505149 GDPD2Q9HCC8 539 aa7.88□□□□□ -1.15
LINC01088-202ENST00000505149 EMILIN1Q9Y6C2 1016 aa7.88□□□□□ -1.15
LINC01088-202ENST00000505149 CAPN5O15484 640 aaPredicted RBP7.87□□□□□ -1.15
LINC01088-202ENST00000505149 WASHC4Q2M389 1173 aa7.87□□□□□ -1.15
LINC01088-202ENST00000505149 WDR4P57081 412 aaKnown RBP7.86□□□□□ -1.15
LINC01088-202ENST00000505149 INTS6LQ5JSJ4 861 aaKnown RBP7.86□□□□□ -1.15
LINC01088-202ENST00000505149 TRIM52Q96A61 297 aa7.86□□□□□ -1.15
LINC01088-202ENST00000505149 ATP13A2Q9NQ11 1180 aa7.85□□□□□ -1.15
LINC01088-202ENST00000505149 ZIC2O95409 532 aaPredicted RBP7.84□□□□□ -1.15
LINC01088-202ENST00000505149 SOX11P35716 441 aa7.84□□□□□ -1.15
LINC01088-202ENST00000505149 EIF4G2P78344 907 aaKnown RBP eCLIP7.84□□□□□ -1.15
LINC01088-202ENST00000505149 PPP1R26Q5T8A7 1209 aaPredicted RBP7.84□□□□□ -1.15
LINC01088-202ENST00000505149 RNF20Q5VTR2 975 aa7.84□□□□□ -1.15
LINC01088-202ENST00000505149 ITPKCQ96DU7 683 aa7.84□□□□□ -1.15
LINC01088-202ENST00000505149 PGPEP1Q9NXJ5 209 aa7.84□□□□□ -1.15
LINC01088-202ENST00000505149 DACH1Q9UI36 760 aa7.84□□□□□ -1.15
LINC01088-202ENST00000505149 PCDHB9Q9Y5E1 797 aa7.84□□□□□ -1.15
LINC01088-202ENST00000505149 UBTFP17480 764 aaKnown RBP7.83□□□□□ -1.16
LINC01088-202ENST00000505149 ABL2P42684 1182 aa7.83□□□□□ -1.16
LINC01088-202ENST00000505149 Q6ZVU0 165 aa7.83□□□□□ -1.16
LINC01088-202ENST00000505149 SENP2Q9HC62 589 aa7.83□□□□□ -1.16
LINC01088-202ENST00000505149 RAD21O60216 631 aa7.82□□□□□ -1.16
LINC01088-202ENST00000505149 WWC1Q8IX03 1113 aa7.82□□□□□ -1.16
LINC01088-202ENST00000505149 MEIOBQ8N635 442 aa7.82□□□□□ -1.16
LINC01088-202ENST00000505149 ZNF775Q96BV0 537 aaPredicted RBP7.82□□□□□ -1.16
LINC01088-202ENST00000505149 ZFAND3Q9H8U3 227 aa7.82□□□□□ -1.16
LINC01088-202ENST00000505149 GIGYF1O75420 1035 aaPredicted RBP7.81□□□□□ -1.16
LINC01088-202ENST00000505149 MRPL14Q6P1L8 145 aaKnown RBP7.81□□□□□ -1.16
LINC01088-202ENST00000505149 TRIM46Q7Z4K8 759 aa7.81□□□□□ -1.16
LINC01088-202ENST00000505149 KIFC2Q96AC6 838 aa7.81□□□□□ -1.16
LINC01088-202ENST00000505149 POM121Q96HA1 1249 aa7.81□□□□□ -1.16
LINC01088-202ENST00000505149 CEP126Q9P2H0 1117 aa7.81□□□□□ -1.16
LINC01088-202ENST00000505149 A6NJR5 290 aa7.8□□□□□ -1.16
LINC01088-202ENST00000505149 ERVH48-1M5A8F1 160 aa7.8□□□□□ -1.16
LINC01088-202ENST00000505149 TRIM47Q96LD4 638 aa7.8□□□□□ -1.16
LINC01088-202ENST00000505149 CHIC2Q9UKJ5 165 aa7.8□□□□□ -1.16
LINC01088-202ENST00000505149 VAC14Q08AM6 782 aa7.79□□□□□ -1.16
LINC01088-202ENST00000505149 PHTF2Q8N3S3 785 aa7.79□□□□□ -1.16
LINC01088-202ENST00000505149 FNBP4Q8N3X1 1017 aaPredicted RBP7.79□□□□□ -1.16
LINC01088-202ENST00000505149 GMPR2Q9P2T1 348 aaKnown RBP7.79□□□□□ -1.16
LINC01088-202ENST00000505149 LILRA1O75019 489 aa7.78□□□□□ -1.16
LINC01088-202ENST00000505149 ZNF787Q6DD87 383 aa7.78□□□□□ -1.16
LINC01088-202ENST00000505149 TSEN34Q9BSV6 310 aaKnown RBP7.78□□□□□ -1.16
LINC01088-202ENST00000505149 POTECB2RU33 542 aa7.77□□□□□ -1.17
LINC01088-202ENST00000505149 ERVK-9P63128 1117 aa7.77□□□□□ -1.17
LINC01088-202ENST00000505149 SCARF1Q14162 830 aa7.77□□□□□ -1.17
LINC01088-202ENST00000505149 ZNF784Q8NCA9 323 aaPredicted RBP7.77□□□□□ -1.17
LINC01088-202ENST00000505149 ALG2Q9H553 416 aa7.77□□□□□ -1.17
LINC01088-202ENST00000505149 BMP1P13497 986 aa7.76□□□□□ -1.17
LINC01088-202ENST00000505149 LINC00528Q8N1L1 170 aa7.76□□□□□ -1.17
LINC01088-202ENST00000505149 UPP2O95045 317 aa7.75□□□□□ -1.17
LINC01088-202ENST00000505149 ZFP42Q96MM3 310 aa7.75□□□□□ -1.17
LINC01088-202ENST00000505149 TMPRSS4Q9NRS4 437 aa7.75□□□□□ -1.17
LINC01088-202ENST00000505149 C11orf95C9JLR9 678 aaPredicted RBP7.74□□□□□ -1.17
LINC01088-202ENST00000505149 ADH1AP07327 375 aa7.74□□□□□ -1.17
LINC01088-202ENST00000505149 SEMA3FQ13275 785 aa7.74□□□□□ -1.17
LINC01088-202ENST00000505149 PROSER2Q86WR7 435 aaPredicted RBP7.74□□□□□ -1.17
LINC01088-202ENST00000505149 NFATC2IPQ8NCF5 419 aa7.74□□□□□ -1.17
LINC01088-202ENST00000505149 SPINT1O43278 529 aa7.73□□□□□ -1.17
LINC01088-202ENST00000505149 TRAK2O60296 914 aa7.73□□□□□ -1.17
LINC01088-202ENST00000505149 ADD1P35611 737 aaKnown RBP7.73□□□□□ -1.17
LINC01088-202ENST00000505149 CBLBQ13191 982 aa7.73□□□□□ -1.17
LINC01088-202ENST00000505149 MAP7D1Q3KQU3 841 aa7.73□□□□□ -1.17
LINC01088-202ENST00000505149 CC2D2BQ6DHV5 1058 aa7.73□□□□□ -1.17
LINC01088-202ENST00000505149 CLUAP1Q96AJ1 413 aa7.73□□□□□ -1.17
LINC01088-202ENST00000505149 RAB15P59190 212 aa7.72□□□□□ -1.17
LINC01088-202ENST00000505149 SLFNL1Q499Z3 407 aa7.72□□□□□ -1.17
LINC01088-202ENST00000505149 KDF1Q8NAX2 398 aaPredicted RBP7.72□□□□□ -1.17
LINC01088-202ENST00000505149 CCDC85AQ96PX6 553 aaPredicted RBP7.72□□□□□ -1.17
LINC01088-202ENST00000505149 PURBQ96QR8 312 aaKnown RBP7.72□□□□□ -1.17
LINC01088-202ENST00000505149 SOS2Q07890 1332 aaPredicted RBP7.72□□□□□ -1.17
LINC01088-202ENST00000505149 SNRPBP14678 240 aaKnown RBP7.71□□□□□ -1.18
LINC01088-202ENST00000505149 RNF135Q8IUD6 432 aa7.71□□□□□ -1.18
LINC01088-202ENST00000505149 PCDHB11Q9Y5F2 797 aa7.71□□□□□ -1.18
LINC01088-202ENST00000505149 LZTS3O60299 673 aaPredicted RBP7.7□□□□□ -1.18
LINC01088-202ENST00000505149 BMP2P12643 396 aa7.7□□□□□ -1.18
LINC01088-202ENST00000505149 PTGIRP43119 386 aa7.7□□□□□ -1.18
LINC01088-202ENST00000505149 ADAMTS19Q8TE59 1207 aa7.7□□□□□ -1.18
LINC01088-202ENST00000505149 CYLDQ9NQC7 956 aa7.7□□□□□ -1.18
LINC01088-202ENST00000505149 GTF3C3Q9Y5Q9 886 aa7.7□□□□□ -1.18
LINC01088-202ENST00000505149 POM121CA8CG34 1229 aa7.69□□□□□ -1.18
LINC01088-202ENST00000505149 SCTRP47872 440 aa7.69□□□□□ -1.18
LINC01088-202ENST00000505149 CYP2U1Q7Z449 544 aa7.69□□□□□ -1.18
LINC01088-202ENST00000505149 SIRT1Q96EB6 747 aa7.69□□□□□ -1.18
LINC01088-202ENST00000505149 OSBPL3Q9H4L5 887 aa7.69□□□□□ -1.18
LINC01088-202ENST00000505149 DOLKQ9UPQ8 538 aa7.69□□□□□ -1.18
LINC01088-202ENST00000505149 ATP5J2-PTCD1G3V325 749 aa7.68□□□□□ -1.18
LINC01088-202ENST00000505149 USP4Q13107 963 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms