RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 AEBP1Q8IUX7 1158 aa12.24□□□□□ -0.45
CSF1R-203ENST00000504875 TSPYL6Q8N831 410 aa12.24□□□□□ -0.45
CSF1R-203ENST00000504875 CLTCQ00610 1675 aaKnown RBP12.24□□□□□ -0.45
CSF1R-203ENST00000504875 AMOTL2Q9Y2J4 779 aa12.24□□□□□ -0.45
CSF1R-203ENST00000504875 TMEM131LA2VDJ0 1609 aa12.24□□□□□ -0.45
CSF1R-203ENST00000504875 NAP1L5Q96NT1 182 aaPredicted RBP12.23□□□□□ -0.45
CSF1R-203ENST00000504875 CHMP4BQ9H444 224 aaKnown RBP12.23□□□□□ -0.45
CSF1R-203ENST00000504875 HSP90AA1P07900 732 aaKnown RBP12.23□□□□□ -0.45
CSF1R-203ENST00000504875 NFKBIBQ15653 356 aa12.23□□□□□ -0.45
CSF1R-203ENST00000504875 MCM10Q7L590 875 aa12.23□□□□□ -0.45
CSF1R-203ENST00000504875 MBIPQ9NS73 344 aa12.23□□□□□ -0.45
CSF1R-203ENST00000504875 IL16Q14005 1332 aa12.23□□□□□ -0.45
CSF1R-203ENST00000504875 SLC4A10Q6U841 1118 aa12.22□□□□□ -0.45
CSF1R-203ENST00000504875 USP35Q9P2H5 1018 aa12.22□□□□□ -0.45
CSF1R-203ENST00000504875 LTKP29376 864 aa12.22□□□□□ -0.45
CSF1R-203ENST00000504875 NLRP6P59044 892 aa12.22□□□□□ -0.45
CSF1R-203ENST00000504875 RBM33Q96EV2 1170 aaKnown RBP12.22□□□□□ -0.45
CSF1R-203ENST00000504875 HSP90AB2PQ58FF8 381 aa12.22□□□□□ -0.45
CSF1R-203ENST00000504875 IL13P35225 146 aa12.21□□□□□ -0.45
CSF1R-203ENST00000504875 NECTIN2Q92692 538 aa12.21□□□□□ -0.46
CSF1R-203ENST00000504875 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.46
CSF1R-203ENST00000504875 DIP2BQ9P265 1576 aa12.21□□□□□ -0.46
CSF1R-203ENST00000504875 TTC21BQ7Z4L5 1316 aa12.21□□□□□ -0.46
CSF1R-203ENST00000504875 IQSEC2Q5JU85 1478 aa12.2□□□□□ -0.46
CSF1R-203ENST00000504875 EDC4Q6P2E9 1401 aaKnown RBP12.2□□□□□ -0.46
CSF1R-203ENST00000504875 IFT57Q9NWB7 429 aa12.2□□□□□ -0.46
CSF1R-203ENST00000504875 ARHGEF40Q8TER5 1519 aa12.2□□□□□ -0.46
CSF1R-203ENST00000504875 ALDH1L2Q3SY69 923 aa12.19□□□□□ -0.46
CSF1R-203ENST00000504875 C8orf58Q8NAV2 365 aa12.19□□□□□ -0.46
CSF1R-203ENST00000504875 PRR36Q9H6K5 1346 aa12.19□□□□□ -0.46
CSF1R-203ENST00000504875 EIF4A2Q14240 407 aaKnown RBP12.19□□□□□ -0.46
CSF1R-203ENST00000504875 API5Q9BZZ5 524 aaKnown RBP12.19□□□□□ -0.46
CSF1R-203ENST00000504875 TMEM2Q9UHN6 1383 aa12.19□□□□□ -0.46
CSF1R-203ENST00000504875 KRT24Q2M2I5 525 aa12.19□□□□□ -0.46
CSF1R-203ENST00000504875 SHPRHQ149N8 1683 aa12.19□□□□□ -0.46
CSF1R-203ENST00000504875 VAMP4O75379 141 aa12.18□□□□□ -0.46
CSF1R-203ENST00000504875 THEMISQ8N1K5 641 aaPredicted RBP12.18□□□□□ -0.46
CSF1R-203ENST00000504875 A0A0U1RQG5 324 aaPredicted RBP12.18□□□□□ -0.46
CSF1R-203ENST00000504875 FRAT2O75474 233 aaPredicted RBP12.18□□□□□ -0.46
CSF1R-203ENST00000504875 HAP1P54257 671 aaPredicted RBP12.18□□□□□ -0.46
CSF1R-203ENST00000504875 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
CSF1R-203ENST00000504875 ROBO2Q9HCK4 1378 aa12.18□□□□□ -0.46
CSF1R-203ENST00000504875 C22orf23Q9BZE7 217 aa12.17□□□□□ -0.46
CSF1R-203ENST00000504875 TSPYL4Q9UJ04 414 aa12.17□□□□□ -0.46
CSF1R-203ENST00000504875 CD163L1Q9NR16 1453 aa12.17□□□□□ -0.46
CSF1R-203ENST00000504875 ABTB2Q8N961 1025 aa12.17□□□□□ -0.46
CSF1R-203ENST00000504875 ATP7BP35670 1465 aa12.16□□□□□ -0.46
CSF1R-203ENST00000504875 HSCBQ8IWL3 235 aa12.16□□□□□ -0.46
CSF1R-203ENST00000504875 NCBP3Q53F19 620 aaKnown RBP12.16□□□□□ -0.46
CSF1R-203ENST00000504875 ZBTB40Q9NUA8 1239 aa12.16□□□□□ -0.46
CSF1R-203ENST00000504875 MRPL50Q8N5N7 158 aaKnown RBP12.16□□□□□ -0.46
CSF1R-203ENST00000504875 ZNF428Q96B54 188 aa12.16□□□□□ -0.46
CSF1R-203ENST00000504875 CHD1LQ86WJ1 897 aa12.15□□□□□ -0.46
CSF1R-203ENST00000504875 HDAC1Q13547 482 aaPredicted RBP12.15□□□□□ -0.46
CSF1R-203ENST00000504875 HSP90AA2PQ14568 343 aaPredicted RBP12.15□□□□□ -0.46
CSF1R-203ENST00000504875 STK31Q9BXU1 1019 aa12.15□□□□□ -0.46
CSF1R-203ENST00000504875 USP32Q8NFA0 1604 aa12.14□□□□□ -0.47
CSF1R-203ENST00000504875 FOXO3O43524 673 aa12.14□□□□□ -0.47
CSF1R-203ENST00000504875 SLC4A2P04920 1241 aa12.14□□□□□ -0.47
CSF1R-203ENST00000504875 HSP90AB1P08238 724 aaKnown RBP12.14□□□□□ -0.47
CSF1R-203ENST00000504875 PNPLA6Q8IY17 1366 aa12.14□□□□□ -0.47
CSF1R-203ENST00000504875 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
CSF1R-203ENST00000504875 AGLP35573 1532 aa12.13□□□□□ -0.47
CSF1R-203ENST00000504875 LRRC7Q96NW7 1537 aa12.13□□□□□ -0.47
CSF1R-203ENST00000504875 FAM135BQ49AJ0 1406 aa12.13□□□□□ -0.47
CSF1R-203ENST00000504875 MED14O60244 1454 aa12.12□□□□□ -0.47
CSF1R-203ENST00000504875 MAP3K19Q56UN5 1328 aa12.12□□□□□ -0.47
CSF1R-203ENST00000504875 USHBP1Q8N6Y0 703 aa12.12□□□□□ -0.47
CSF1R-203ENST00000504875 TBC1D32Q96NH3 1257 aa12.12□□□□□ -0.47
CSF1R-203ENST00000504875 COL3A1P02461 1466 aaPredicted RBP12.11□□□□□ -0.47
CSF1R-203ENST00000504875 KCNA6P17658 529 aa12.11□□□□□ -0.47
CSF1R-203ENST00000504875 PSME1Q06323 249 aa12.11□□□□□ -0.47
CSF1R-203ENST00000504875 SMC5Q8IY18 1101 aa12.11□□□□□ -0.47
CSF1R-203ENST00000504875 GCC1Q96CN9 775 aa12.11□□□□□ -0.47
CSF1R-203ENST00000504875 NLRP1Q9C000 1473 aa12.11□□□□□ -0.47
CSF1R-203ENST00000504875 FKBP5Q13451 457 aaPredicted RBP12.11□□□□□ -0.47
CSF1R-203ENST00000504875 SPATA31D1Q6ZQQ2 1576 aa12.1□□□□□ -0.47
CSF1R-203ENST00000504875 ZBTB7BO15156 539 aaPredicted RBP12.1□□□□□ -0.47
CSF1R-203ENST00000504875 XPCQ01831 940 aaPredicted RBP12.1□□□□□ -0.47
CSF1R-203ENST00000504875 ESCO1Q5FWF5 840 aa12.1□□□□□ -0.47
CSF1R-203ENST00000504875 F6X3S4 739 aa12.1□□□□□ -0.47
CSF1R-203ENST00000504875 SIRT1Q96EB6 747 aa12.1□□□□□ -0.47
CSF1R-203ENST00000504875 TBC1D2Q9BYX2 928 aa12.1□□□□□ -0.47
CSF1R-203ENST00000504875 MAP2P11137 1827 aaKnown RBP12.1□□□□□ -0.47
CSF1R-203ENST00000504875 EIF2S2P20042 333 aaKnown RBP12.1□□□□□ -0.47
CSF1R-203ENST00000504875 NUCB1Q02818 461 aa12.1□□□□□ -0.47
CSF1R-203ENST00000504875 GZF1Q9H116 711 aaPredicted RBP12.1□□□□□ -0.47
CSF1R-203ENST00000504875 CPSF1Q10570 1443 aaKnown RBP12.1□□□□□ -0.47
CSF1R-203ENST00000504875 CPS1P31327 1500 aa12.1□□□□□ -0.47
CSF1R-203ENST00000504875 GAS2L2Q8NHY3 880 aa12.09□□□□□ -0.47
CSF1R-203ENST00000504875 PLEKHG3A1L390 1219 aa12.09□□□□□ -0.47
CSF1R-203ENST00000504875 MTHFSDQ2M296 383 aaKnown RBP12.09□□□□□ -0.47
CSF1R-203ENST00000504875 FAM43AQ8N2R8 423 aa12.09□□□□□ -0.47
CSF1R-203ENST00000504875 ARHGAP45Q92619 1136 aa12.09□□□□□ -0.47
CSF1R-203ENST00000504875 AATKQ6ZMQ8 1374 aa12.09□□□□□ -0.47
CSF1R-203ENST00000504875 DLC1Q96QB1 1528 aa12.08□□□□□ -0.47
CSF1R-203ENST00000504875 TBX22Q9Y458 520 aa12.08□□□□□ -0.48
CSF1R-203ENST00000504875 USP19O94966 1318 aa12.08□□□□□ -0.48
CSF1R-203ENST00000504875 CASC1Q6TDU7 716 aa12.08□□□□□ -0.48
CSF1R-203ENST00000504875 EYA1Q99502 592 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms