RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 GAS6Q14393 721 aa6.51□□□□□ -1.37
HMGB3P17-201ENST00000504195 ZMYM1Q5SVZ6 1142 aa6.51□□□□□ -1.37
HMGB3P17-201ENST00000504195 POLMQ9NP87 494 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P17-201ENST00000504195 IGF1RP08069 1367 aa6.5□□□□□ -1.37
HMGB3P17-201ENST00000504195 KRBA1A5PL33 1030 aa6.5□□□□□ -1.37
HMGB3P17-201ENST00000504195 MTMR2Q13614 643 aa6.5□□□□□ -1.37
HMGB3P17-201ENST00000504195 FOXR1Q6PIV2 292 aa6.5□□□□□ -1.37
HMGB3P17-201ENST00000504195 MAP4K5Q9Y4K4 846 aa6.5□□□□□ -1.37
HMGB3P17-201ENST00000504195 SCO2A0A1W2PP80 73 aa6.49□□□□□ -1.37
HMGB3P17-201ENST00000504195 CBLBQ13191 982 aa6.48□□□□□ -1.37
HMGB3P17-201ENST00000504195 C4orf48Q5BLP8 95 aa6.48□□□□□ -1.37
HMGB3P17-201ENST00000504195 GPCPD1Q9NPB8 672 aa6.48□□□□□ -1.37
HMGB3P17-201ENST00000504195 CTSOP43234 321 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P17-201ENST00000504195 MAP2K5Q13163 448 aa6.47□□□□□ -1.37
HMGB3P17-201ENST00000504195 Q6ZVU0 165 aa6.47□□□□□ -1.37
HMGB3P17-201ENST00000504195 KRTAP9-9Q9BYP9 154 aa6.47□□□□□ -1.37
HMGB3P17-201ENST00000504195 KRTAP9-4Q9BYQ2 154 aa6.47□□□□□ -1.37
HMGB3P17-201ENST00000504195 MAP10Q9P2G4 905 aa6.47□□□□□ -1.37
HMGB3P17-201ENST00000504195 MKL2Q9ULH7 1088 aa6.47□□□□□ -1.37
HMGB3P17-201ENST00000504195 SENP3-EIF4A1A0A087X0R7 540 aa6.46□□□□□ -1.38
HMGB3P17-201ENST00000504195 CLCN1P35523 988 aa6.46□□□□□ -1.38
HMGB3P17-201ENST00000504195 KRI1Q8N9T8 703 aaKnown RBP6.46□□□□□ -1.38
HMGB3P17-201ENST00000504195 INSM2Q96T92 566 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P17-201ENST00000504195 LRRC4BQ9NT99 713 aa6.46□□□□□ -1.38
HMGB3P17-201ENST00000504195 FAM217BQ9NTX9 383 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P17-201ENST00000504195 NSFL1CQ9UNZ2 370 aaKnown RBP6.46□□□□□ -1.38
HMGB3P17-201ENST00000504195 KRTAP4-8A0A0G2JLE6 195 aa6.45□□□□□ -1.38
HMGB3P17-201ENST00000504195 RELBQ01201 579 aa6.45□□□□□ -1.38
HMGB3P17-201ENST00000504195 PPP1R26Q5T8A7 1209 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P17-201ENST00000504195 LYPD8Q6UX82 237 aa6.45□□□□□ -1.38
HMGB3P17-201ENST00000504195 RNF217Q8TC41 542 aa6.45□□□□□ -1.38
HMGB3P17-201ENST00000504195 MAGEB6P1A0A0J9YX57 407 aa6.44□□□□□ -1.38
HMGB3P17-201ENST00000504195 GPR25O00155 361 aa6.44□□□□□ -1.38
HMGB3P17-201ENST00000504195 ACDQ96AP0 544 aa6.44□□□□□ -1.38
HMGB3P17-201ENST00000504195 C1QTNF2Q9BXJ5 285 aa6.44□□□□□ -1.38
HMGB3P17-201ENST00000504195 SEMA6BQ9H3T3 888 aa6.44□□□□□ -1.38
HMGB3P17-201ENST00000504195 F12P00748 615 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P17-201ENST00000504195 NDUFV2P19404 249 aa6.43□□□□□ -1.38
HMGB3P17-201ENST00000504195 GRIN2CQ14957 1233 aa6.43□□□□□ -1.38
HMGB3P17-201ENST00000504195 NBPF14Q5TI25 921 aa6.43□□□□□ -1.38
HMGB3P17-201ENST00000504195 TRMT44Q8IYL2 757 aaKnown RBP6.43□□□□□ -1.38
HMGB3P17-201ENST00000504195 ARMC2Q8NEN0 867 aa6.43□□□□□ -1.38
HMGB3P17-201ENST00000504195 GMCL1Q96IK5 515 aa6.43□□□□□ -1.38
HMGB3P17-201ENST00000504195 RRAGCQ9HB90 399 aa6.43□□□□□ -1.38
HMGB3P17-201ENST00000504195 IRF6O14896 467 aa6.42□□□□□ -1.38
HMGB3P17-201ENST00000504195 SNRPNP63162 240 aaKnown RBP6.42□□□□□ -1.38
HMGB3P17-201ENST00000504195 ZNF837Q96EG3 531 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P17-201ENST00000504195 AGBL1Q96MI9 1066 aa6.42□□□□□ -1.38
HMGB3P17-201ENST00000504195 TRERF1Q96PN7 1200 aa6.42□□□□□ -1.38
HMGB3P17-201ENST00000504195 CUEDC1Q9NWM3 386 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P17-201ENST00000504195 OIP5O43482 229 aa6.41□□□□□ -1.38
HMGB3P17-201ENST00000504195 DHX9Q08211 1270 aaKnown RBP6.41□□□□□ -1.38
HMGB3P17-201ENST00000504195 PRPF38BQ5VTL8 546 aaKnown RBP6.41□□□□□ -1.38
HMGB3P17-201ENST00000504195 NBPF11Q86T75 865 aa6.41□□□□□ -1.38
HMGB3P17-201ENST00000504195 MINK1Q8N4C8 1332 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P17-201ENST00000504195 MOXD2PA6NHM9 499 aa6.4□□□□□ -1.38
HMGB3P17-201ENST00000504195 PIK3R2O00459 728 aa6.4□□□□□ -1.38
HMGB3P17-201ENST00000504195 MX2P20592 715 aa6.4□□□□□ -1.38
HMGB3P17-201ENST00000504195 LYSMD3Q7Z3D4 306 aa6.4□□□□□ -1.38
HMGB3P17-201ENST00000504195 TRIM22Q8IYM9 498 aa6.4□□□□□ -1.38
HMGB3P17-201ENST00000504195 SPIRE2Q8WWL2 714 aa6.4□□□□□ -1.38
HMGB3P17-201ENST00000504195 CARD14Q9BXL6 1004 aa6.4□□□□□ -1.38
HMGB3P17-201ENST00000504195 COL8A1P27658 744 aa6.39□□□□□ -1.39
HMGB3P17-201ENST00000504195 RIPOR1Q6ZS17 1223 aa6.39□□□□□ -1.39
HMGB3P17-201ENST00000504195 ZNF395Q9H8N7 513 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P17-201ENST00000504195 GOLGA2P5Q9HBQ8 144 aa6.39□□□□□ -1.39
HMGB3P17-201ENST00000504195 C1QTNF9BB2RNN3 333 aa6.38□□□□□ -1.39
HMGB3P17-201ENST00000504195 OXCT2Q9BYC2 517 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P17-201ENST00000504195 H7C1W4 665 aa6.37□□□□□ -1.39
HMGB3P17-201ENST00000504195 ITGB7P26010 798 aa6.37□□□□□ -1.39
HMGB3P17-201ENST00000504195 ZFP64Q9NPA5 681 aa6.37□□□□□ -1.39
HMGB3P17-201ENST00000504195 TULP1O00294 542 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P17-201ENST00000504195 MAP2K3P46734 347 aa6.36□□□□□ -1.39
HMGB3P17-201ENST00000504195 FOXD4L5Q5VV16 416 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P17-201ENST00000504195 GTPBP3Q969Y2 492 aaKnown RBP6.36□□□□□ -1.39
HMGB3P17-201ENST00000504195 CCDC102AQ96A19 550 aa6.36□□□□□ -1.39
HMGB3P17-201ENST00000504195 CFAP99D6REC4 459 aa6.35□□□□□ -1.39
HMGB3P17-201ENST00000504195 AMPD1P23109 780 aa6.35□□□□□ -1.39
HMGB3P17-201ENST00000504195 DOC2BQ14184 412 aa6.35□□□□□ -1.39
HMGB3P17-201ENST00000504195 SH3BP5LQ7L8J4 393 aa6.35□□□□□ -1.39
HMGB3P17-201ENST00000504195 CD163Q86VB7 1156 aa6.35□□□□□ -1.39
HMGB3P17-201ENST00000504195 KRTAP19-1Q8IUB9 90 aa6.35□□□□□ -1.39
HMGB3P17-201ENST00000504195 SLC10A4Q96EP9 437 aa6.35□□□□□ -1.39
HMGB3P17-201ENST00000504195 CDV3Q9UKY7 258 aaKnown RBP6.35□□□□□ -1.39
HMGB3P17-201ENST00000504195 KDM2AQ9Y2K7 1162 aa6.35□□□□□ -1.39
HMGB3P17-201ENST00000504195 TSC1Q92574 1164 aa6.34□□□□□ -1.39
HMGB3P17-201ENST00000504195 KCTD15Q96SI1 283 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P17-201ENST00000504195 ZBTB3Q9H5J0 574 aa6.34□□□□□ -1.39
HMGB3P17-201ENST00000504195 RTN4Q9NQC3 1192 aaKnown RBP6.34□□□□□ -1.39
HMGB3P17-201ENST00000504195 SHISA8B8ZZ34 492 aa6.33□□□□□ -1.4
HMGB3P17-201ENST00000504195 RHOQP17081 205 aa6.33□□□□□ -1.4
HMGB3P17-201ENST00000504195 DBN1Q16643 649 aa6.33□□□□□ -1.4
HMGB3P17-201ENST00000504195 ERFEQ4G0M1 354 aa6.33□□□□□ -1.4
HMGB3P17-201ENST00000504195 PRICKLE2Q7Z3G6 844 aa6.33□□□□□ -1.4
HMGB3P17-201ENST00000504195 NOP53Q9NZM5 478 aaKnown RBP6.33□□□□□ -1.4
HMGB3P17-201ENST00000504195 GNB5O14775 395 aa6.32□□□□□ -1.4
HMGB3P17-201ENST00000504195 SSTR3P32745 418 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P17-201ENST00000504195 GJA5P36382 358 aa6.32□□□□□ -1.4
HMGB3P17-201ENST00000504195 CHRNA4P43681 627 aa6.32□□□□□ -1.4
HMGB3P17-201ENST00000504195 ARTNQ5T4W7 220 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms