RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 ARHGEF25Q86VW2 580 aa10.69□□□□□ -0.7
TOPBP1-202ENST00000503338 TCP11L2Q8N4U5 519 aa10.69□□□□□ -0.7
TOPBP1-202ENST00000503338 PLEKHF1Q96S99 279 aa10.69□□□□□ -0.7
TOPBP1-202ENST00000503338 MARF1Q9Y4F3 1742 aaKnown RBP10.69□□□□□ -0.7
TOPBP1-202ENST00000503338 MED1Q15648 1581 aaPredicted RBP10.69□□□□□ -0.7
TOPBP1-202ENST00000503338 ZNF521Q96K83 1311 aa10.68□□□□□ -0.7
TOPBP1-202ENST00000503338 GOLGA2Q08379 1002 aa10.68□□□□□ -0.7
TOPBP1-202ENST00000503338 HSP90AB2PQ58FF8 381 aa10.68□□□□□ -0.7
TOPBP1-202ENST00000503338 RSPH6AQ9H0K4 717 aa10.68□□□□□ -0.7
TOPBP1-202ENST00000503338 PHRF1Q9P1Y6 1649 aaKnown RBP10.68□□□□□ -0.7
TOPBP1-202ENST00000503338 ABCC6O95255 1503 aa10.68□□□□□ -0.7
TOPBP1-202ENST00000503338 PRKAR2BP31323 418 aa10.67□□□□□ -0.7
TOPBP1-202ENST00000503338 LMOD3Q0VAK6 560 aa10.67□□□□□ -0.7
TOPBP1-202ENST00000503338 WDR63Q8IWG1 891 aa10.67□□□□□ -0.7
TOPBP1-202ENST00000503338 LRRC59Q96AG4 307 aaKnown RBP10.67□□□□□ -0.7
TOPBP1-202ENST00000503338 CPDO75976 1380 aa10.66□□□□□ -0.7
TOPBP1-202ENST00000503338 NHSL1Q5SYE7 1610 aa10.66□□□□□ -0.7
TOPBP1-202ENST00000503338 IGSF1Q8N6C5 1336 aa10.66□□□□□ -0.7
TOPBP1-202ENST00000503338 E9PSI1 815 aa10.66□□□□□ -0.7
TOPBP1-202ENST00000503338 TMPOP42166 694 aaKnown RBP10.66□□□□□ -0.7
TOPBP1-202ENST00000503338 DDX17Q92841 729 aaKnown RBP10.66□□□□□ -0.7
TOPBP1-202ENST00000503338 SALL2Q9Y467 1007 aaPredicted RBP10.66□□□□□ -0.7
TOPBP1-202ENST00000503338 PEAK1Q9H792 1746 aa10.66□□□□□ -0.7
TOPBP1-202ENST00000503338 AHDC1Q5TGY3 1603 aaPredicted RBP10.66□□□□□ -0.7
TOPBP1-202ENST00000503338 CALD1Q05682 793 aaKnown RBP10.65□□□□□ -0.7
TOPBP1-202ENST00000503338 SULT6B1Q6IMI4 303 aa10.65□□□□□ -0.7
TOPBP1-202ENST00000503338 WWC1Q8IX03 1113 aa10.65□□□□□ -0.7
TOPBP1-202ENST00000503338 KDRP35968 1356 aa10.65□□□□□ -0.71
TOPBP1-202ENST00000503338 HMOX1P09601 288 aa10.64□□□□□ -0.71
TOPBP1-202ENST00000503338 HAP1P54257 671 aaPredicted RBP10.64□□□□□ -0.71
TOPBP1-202ENST00000503338 NFE2L2Q16236 605 aa10.64□□□□□ -0.71
TOPBP1-202ENST00000503338 EYA1Q99502 592 aa10.64□□□□□ -0.71
TOPBP1-202ENST00000503338 IL16Q14005 1332 aa10.63□□□□□ -0.71
TOPBP1-202ENST00000503338 LTN1O94822 1766 aa10.63□□□□□ -0.71
TOPBP1-202ENST00000503338 RIPK4P57078 832 aa10.63□□□□□ -0.71
TOPBP1-202ENST00000503338 PLEKHG2Q9H7P9 1386 aa10.63□□□□□ -0.71
TOPBP1-202ENST00000503338 RGPD1P0DJD0 1748 aa10.62□□□□□ -0.71
TOPBP1-202ENST00000503338 NEFLP07196 543 aa10.62□□□□□ -0.71
TOPBP1-202ENST00000503338 ZC3H6P61129 1189 aaKnown RBP10.62□□□□□ -0.71
TOPBP1-202ENST00000503338 SLFN5Q08AF3 891 aa10.62□□□□□ -0.71
TOPBP1-202ENST00000503338 NEUROD2Q15784 382 aa10.62□□□□□ -0.71
TOPBP1-202ENST00000503338 GAS2L2Q8NHY3 880 aa10.62□□□□□ -0.71
TOPBP1-202ENST00000503338 MYH16Q9H6N6 1097 aa10.62□□□□□ -0.71
TOPBP1-202ENST00000503338 ROBO1Q9Y6N7 1651 aa10.62□□□□□ -0.71
TOPBP1-202ENST00000503338 ZBTB7CA1YPR0 619 aa10.61□□□□□ -0.71
TOPBP1-202ENST00000503338 TRMT2AQ8IZ69 625 aaKnown RBP10.61□□□□□ -0.71
TOPBP1-202ENST00000503338 ANKRD24Q8TF21 1146 aa10.61□□□□□ -0.71
TOPBP1-202ENST00000503338 ERBB3P21860 1342 aa10.6□□□□□ -0.71
TOPBP1-202ENST00000503338 UBAP1LF5GYI3 381 aa10.6□□□□□ -0.71
TOPBP1-202ENST00000503338 HTATSF1O43719 755 aaKnown RBP10.6□□□□□ -0.71
TOPBP1-202ENST00000503338 DUSP27Q5VZP5 1158 aa10.6□□□□□ -0.71
TOPBP1-202ENST00000503338 LTV1Q96GA3 475 aaPredicted RBP10.6□□□□□ -0.71
TOPBP1-202ENST00000503338 PRDM11Q9NQV5 511 aa10.6□□□□□ -0.71
TOPBP1-202ENST00000503338 RRP7AQ9Y3A4 280 aaKnown RBP10.6□□□□□ -0.71
TOPBP1-202ENST00000503338 NCAPD2Q15021 1401 aa10.59□□□□□ -0.71
TOPBP1-202ENST00000503338 CRYBG1Q9Y4K1 1723 aa10.59□□□□□ -0.71
TOPBP1-202ENST00000503338 SENP3-EIF4A1A0A087X0R7 540 aa10.59□□□□□ -0.71
TOPBP1-202ENST00000503338 CT47B1P0C2W7 299 aaPredicted RBP10.59□□□□□ -0.71
TOPBP1-202ENST00000503338 AMOTQ4VCS5 1084 aa10.59□□□□□ -0.71
TOPBP1-202ENST00000503338 AEBP1Q8IUX7 1158 aa10.59□□□□□ -0.71
TOPBP1-202ENST00000503338 CERKQ8TCT0 537 aa10.59□□□□□ -0.71
TOPBP1-202ENST00000503338 CABLES1Q8TDN4 633 aa10.59□□□□□ -0.71
TOPBP1-202ENST00000503338 CDCA7LQ96GN5 454 aa10.59□□□□□ -0.71
TOPBP1-202ENST00000503338 PHACTR3Q96KR7 559 aa10.59□□□□□ -0.71
TOPBP1-202ENST00000503338 TRIM35Q9UPQ4 493 aa10.59□□□□□ -0.71
TOPBP1-202ENST00000503338 KIAA0232Q92628 1395 aa10.59□□□□□ -0.71
TOPBP1-202ENST00000503338 RTF1Q92541 710 aaKnown RBP10.58□□□□□ -0.72
TOPBP1-202ENST00000503338 RCAN3Q9UKA8 241 aa10.58□□□□□ -0.72
TOPBP1-202ENST00000503338 PLEKHG5O94827 1062 aa10.57□□□□□ -0.72
TOPBP1-202ENST00000503338 CSB-PGBD3P0DP91 1061 aa10.57□□□□□ -0.72
TOPBP1-202ENST00000503338 PLEKHO1Q53GL0 409 aaPredicted RBP10.57□□□□□ -0.72
TOPBP1-202ENST00000503338 NBPF6Q5VWK0 638 aa10.57□□□□□ -0.72
TOPBP1-202ENST00000503338 ERICH6BQ5W0A0 696 aa10.57□□□□□ -0.72
TOPBP1-202ENST00000503338 NBPF4Q96M43 638 aa10.57□□□□□ -0.72
TOPBP1-202ENST00000503338 AXIN2Q9Y2T1 843 aa10.57□□□□□ -0.72
TOPBP1-202ENST00000503338 SUPT16HQ9Y5B9 1047 aaKnown RBP10.57□□□□□ -0.72
TOPBP1-202ENST00000503338 GTF3C3Q9Y5Q9 886 aa10.57□□□□□ -0.72
TOPBP1-202ENST00000503338 COL22A1Q8NFW1 1626 aaPredicted RBP10.57□□□□□ -0.72
TOPBP1-202ENST00000503338 FAM208AQ9UK61 1670 aaKnown RBP10.57□□□□□ -0.72
TOPBP1-202ENST00000503338 GNAI1P63096 354 aa10.56□□□□□ -0.72
TOPBP1-202ENST00000503338 PIP4K2BP78356 416 aa10.56□□□□□ -0.72
TOPBP1-202ENST00000503338 IFT57Q9NWB7 429 aa10.56□□□□□ -0.72
TOPBP1-202ENST00000503338 RNF123Q5XPI4 1314 aa10.56□□□□□ -0.72
TOPBP1-202ENST00000503338 PHLPP1O60346 1717 aa10.55□□□□□ -0.72
TOPBP1-202ENST00000503338 COL18A1P39060 1754 aa10.55□□□□□ -0.72
TOPBP1-202ENST00000503338 CAMTA1Q9Y6Y1 1673 aa10.55□□□□□ -0.72
TOPBP1-202ENST00000503338 MTHFSDQ2M296 383 aaKnown RBP10.55□□□□□ -0.72
TOPBP1-202ENST00000503338 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.55□□□□□ -0.72
TOPBP1-202ENST00000503338 RAPGEF4Q8WZA2 1011 aa10.55□□□□□ -0.72
TOPBP1-202ENST00000503338 ZNF428Q96B54 188 aa10.55□□□□□ -0.72
TOPBP1-202ENST00000503338 NLRP2Q9NX02 1062 aa10.55□□□□□ -0.72
TOPBP1-202ENST00000503338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.55□□□□□ -0.72
TOPBP1-202ENST00000503338 WDR17Q8IZU2 1322 aa10.55□□□□□ -0.72
TOPBP1-202ENST00000503338 GNAT3A8MTJ3 354 aa10.54□□□□□ -0.72
TOPBP1-202ENST00000503338 TATP17735 454 aaPredicted RBP10.54□□□□□ -0.72
TOPBP1-202ENST00000503338 KCNA4P22459 653 aa10.54□□□□□ -0.72
TOPBP1-202ENST00000503338 CHRNA2Q15822 529 aa10.54□□□□□ -0.72
TOPBP1-202ENST00000503338 CFAP44Q96MT7 982 aa10.54□□□□□ -0.72
TOPBP1-202ENST00000503338 ABCA3Q99758 1704 aa10.54□□□□□ -0.72
TOPBP1-202ENST00000503338 SPINK5Q9NQ38 1064 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms