RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 VRTNQ9H8Y1 702 aa10.58□□□□□ -0.72
PTCD2-206ENST00000503315 ABCC5O15440 1437 aa10.58□□□□□ -0.72
PTCD2-206ENST00000503315 ZNF335Q9H4Z2 1342 aaPredicted RBP10.57□□□□□ -0.72
PTCD2-206ENST00000503315 ABCC3O15438 1527 aa10.57□□□□□ -0.72
PTCD2-206ENST00000503315 AP1G2O75843 785 aa10.57□□□□□ -0.72
PTCD2-206ENST00000503315 PHF14O94880 888 aa10.57□□□□□ -0.72
PTCD2-206ENST00000503315 NLRP1Q9C000 1473 aa10.56□□□□□ -0.72
PTCD2-206ENST00000503315 SPATA31D1Q6ZQQ2 1576 aa10.56□□□□□ -0.72
PTCD2-206ENST00000503315 UGGT1Q9NYU2 1555 aa10.56□□□□□ -0.72
PTCD2-206ENST00000503315 THEMISQ8N1K5 641 aaPredicted RBP10.56□□□□□ -0.72
PTCD2-206ENST00000503315 NDUFB9Q9Y6M9 179 aa10.56□□□□□ -0.72
PTCD2-206ENST00000503315 NEURL4Q96JN8 1562 aa10.55□□□□□ -0.72
PTCD2-206ENST00000503315 DAPK1P53355 1430 aa10.55□□□□□ -0.72
PTCD2-206ENST00000503315 FGD6Q6ZV73 1430 aa10.55□□□□□ -0.72
PTCD2-206ENST00000503315 SHANK2Q9UPX8 1470 aa10.55□□□□□ -0.72
PTCD2-206ENST00000503315 CFAP70Q5T0N1 1121 aa10.55□□□□□ -0.72
PTCD2-206ENST00000503315 RBM33Q96EV2 1170 aaKnown RBP10.55□□□□□ -0.72
PTCD2-206ENST00000503315 TMEM121BQ9BXQ6 578 aaPredicted RBP10.55□□□□□ -0.72
PTCD2-206ENST00000503315 RRP7BPQ9NSQ0 103 aa10.55□□□□□ -0.72
PTCD2-206ENST00000503315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTCD2-206ENST00000503315 ANKLE2Q86XL3 938 aa10.54□□□□□ -0.72
PTCD2-206ENST00000503315 NLRP7Q8WX94 980 aa10.54□□□□□ -0.72
PTCD2-206ENST00000503315 PPP1R12CQ9BZL4 782 aa10.54□□□□□ -0.72
PTCD2-206ENST00000503315 DEPDC5O75140 1603 aa10.54□□□□□ -0.72
PTCD2-206ENST00000503315 KIF15Q9NS87 1388 aa10.54□□□□□ -0.72
PTCD2-206ENST00000503315 ASTLQ6HA08 431 aaPredicted RBP10.53□□□□□ -0.72
PTCD2-206ENST00000503315 PXYLP1Q8TE99 480 aa10.53□□□□□ -0.72
PTCD2-206ENST00000503315 TRIM35Q9UPQ4 493 aa10.53□□□□□ -0.72
PTCD2-206ENST00000503315 UBR1Q8IWV7 1749 aa10.53□□□□□ -0.72
PTCD2-206ENST00000503315 ERBINQ96RT1 1412 aa10.53□□□□□ -0.72
PTCD2-206ENST00000503315 MED14O60244 1454 aa10.53□□□□□ -0.72
PTCD2-206ENST00000503315 ERVK-7P63135 1459 aa10.53□□□□□ -0.72
PTCD2-206ENST00000503315 PRDM15P57071 1507 aaPredicted RBP10.53□□□□□ -0.72
PTCD2-206ENST00000503315 CSPP1Q1MSJ5 1256 aa10.52□□□□□ -0.73
PTCD2-206ENST00000503315 NUTM1Q86Y26 1132 aa10.52□□□□□ -0.73
PTCD2-206ENST00000503315 ZNF710Q8N1W2 664 aa10.52□□□□□ -0.73
PTCD2-206ENST00000503315 SPTLC1O15269 473 aa10.51□□□□□ -0.73
PTCD2-206ENST00000503315 ATMINO43313 823 aaPredicted RBP10.51□□□□□ -0.73
PTCD2-206ENST00000503315 FAM161AQ3B820 660 aa10.51□□□□□ -0.73
PTCD2-206ENST00000503315 SPIRE2Q8WWL2 714 aa10.51□□□□□ -0.73
PTCD2-206ENST00000503315 ARHGAP31Q2M1Z3 1444 aa10.51□□□□□ -0.73
PTCD2-206ENST00000503315 CHIC2Q9UKJ5 165 aa10.5□□□□□ -0.73
PTCD2-206ENST00000503315 IQGAP1P46940 1657 aa10.5□□□□□ -0.73
PTCD2-206ENST00000503315 STRCP1A6NGW2 1772 aa10.5□□□□□ -0.73
PTCD2-206ENST00000503315 NUTM2BA6NNL0 878 aaPredicted RBP10.5□□□□□ -0.73
PTCD2-206ENST00000503315 NUTM2EB1AL46 878 aaPredicted RBP10.5□□□□□ -0.73
PTCD2-206ENST00000503315 USP17L8P0C7I0 530 aa10.5□□□□□ -0.73
PTCD2-206ENST00000503315 LMOD1P29536 600 aaPredicted RBP10.5□□□□□ -0.73
PTCD2-206ENST00000503315 MYT1Q01538 1121 aa10.5□□□□□ -0.73
PTCD2-206ENST00000503315 NUTM2DQ5VT03 806 aaPredicted RBP10.5□□□□□ -0.73
PTCD2-206ENST00000503315 NUTM2AQ8IVF1 878 aaPredicted RBP10.5□□□□□ -0.73
PTCD2-206ENST00000503315 ANKRD30AQ9BXX3 1397 aa10.5□□□□□ -0.73
PTCD2-206ENST00000503315 ADGRG1Q9Y653 693 aa10.5□□□□□ -0.73
PTCD2-206ENST00000503315 VWDEQ8N2E2 1590 aa10.49□□□□□ -0.73
PTCD2-206ENST00000503315 NPHP4O75161 1426 aaPredicted RBP10.49□□□□□ -0.73
PTCD2-206ENST00000503315 SRPK2P78362 688 aaKnown RBP10.49□□□□□ -0.73
PTCD2-206ENST00000503315 RSBN1LQ6PCB5 846 aaPredicted RBP10.49□□□□□ -0.73
PTCD2-206ENST00000503315 PDCD7Q8N8D1 485 aaKnown RBP10.49□□□□□ -0.73
PTCD2-206ENST00000503315 SLAIN1Q8ND83 568 aa10.49□□□□□ -0.73
PTCD2-206ENST00000503315 CPS1P31327 1500 aa10.48□□□□□ -0.73
PTCD2-206ENST00000503315 RBM47A0AV96 593 aaKnown RBP10.48□□□□□ -0.73
PTCD2-206ENST00000503315 CARNS1A5YM72 827 aa10.48□□□□□ -0.73
PTCD2-206ENST00000503315 PALM3A6NDB9 673 aaPredicted RBP10.48□□□□□ -0.73
PTCD2-206ENST00000503315 UBAP1LF5GYI3 381 aa10.48□□□□□ -0.73
PTCD2-206ENST00000503315 TSR1Q2NL82 804 aaKnown RBP10.48□□□□□ -0.73
PTCD2-206ENST00000503315 TYW1BQ6NUM6 668 aa10.48□□□□□ -0.73
PTCD2-206ENST00000503315 RBM46Q8TBY0 533 aaKnown RBP10.48□□□□□ -0.73
PTCD2-206ENST00000503315 ANO8Q9HCE9 1232 aaPredicted RBP10.48□□□□□ -0.73
PTCD2-206ENST00000503315 ADGRL2O95490 1459 aa10.47□□□□□ -0.73
PTCD2-206ENST00000503315 ATG7O95352 703 aa10.47□□□□□ -0.73
PTCD2-206ENST00000503315 ERCC3P19447 782 aa10.47□□□□□ -0.73
PTCD2-206ENST00000503315 PADI6Q6TGC4 694 aa10.47□□□□□ -0.73
PTCD2-206ENST00000503315 CCER1Q8TC90 406 aaPredicted RBP10.47□□□□□ -0.73
PTCD2-206ENST00000503315 ADAMTS19Q8TE59 1207 aa10.47□□□□□ -0.73
PTCD2-206ENST00000503315 BMP2KQ9NSY1 1161 aaPredicted RBP10.47□□□□□ -0.73
PTCD2-206ENST00000503315 GNEQ9Y223 722 aaKnown RBP10.47□□□□□ -0.73
PTCD2-206ENST00000503315 PIK3C2BO00750 1634 aa10.47□□□□□ -0.73
PTCD2-206ENST00000503315 LMTK2Q8IWU2 1503 aa10.47□□□□□ -0.73
PTCD2-206ENST00000503315 KANK1Q14678 1352 aa10.46□□□□□ -0.73
PTCD2-206ENST00000503315 KDM5AP29375 1690 aaKnown RBP10.46□□□□□ -0.73
PTCD2-206ENST00000503315 GJA5P36382 358 aa10.46□□□□□ -0.74
PTCD2-206ENST00000503315 FAM50AQ14320 339 aaKnown RBP10.46□□□□□ -0.74
PTCD2-206ENST00000503315 SLIT1O75093 1534 aa10.46□□□□□ -0.74
PTCD2-206ENST00000503315 ARHGAP23Q9P227 1491 aa10.46□□□□□ -0.74
PTCD2-206ENST00000503315 LTKP29376 864 aa10.45□□□□□ -0.74
PTCD2-206ENST00000503315 SULF1Q8IWU6 871 aa10.45□□□□□ -0.74
PTCD2-206ENST00000503315 PTCD2Q8WV60 388 aaKnown RBP10.45□□□□□ -0.74
PTCD2-206ENST00000503315 LILRB3O75022 631 aa10.44□□□□□ -0.74
PTCD2-206ENST00000503315 IDI1Q13907 227 aa10.44□□□□□ -0.74
PTCD2-206ENST00000503315 OCEL1Q9H607 264 aa10.44□□□□□ -0.74
PTCD2-206ENST00000503315 SCAF11Q99590 1463 aaKnown RBP10.43□□□□□ -0.74
PTCD2-206ENST00000503315 MYO5BQ9ULV0 1848 aa10.43□□□□□ -0.74
PTCD2-206ENST00000503315 UNCXA6NJT0 531 aa10.43□□□□□ -0.74
PTCD2-206ENST00000503315 TOM1O60784 492 aa10.43□□□□□ -0.74
PTCD2-206ENST00000503315 QPCTQ16769 361 aa10.43□□□□□ -0.74
PTCD2-206ENST00000503315 TXNDC2Q86VQ3 553 aa10.43□□□□□ -0.74
PTCD2-206ENST00000503315 L3MBTL3Q96JM7 780 aaPredicted RBP10.43□□□□□ -0.74
PTCD2-206ENST00000503315 RBM27Q9P2N5 1060 aaKnown RBP10.43□□□□□ -0.74
PTCD2-206ENST00000503315 ANKRD50Q9ULJ7 1429 aa10.43□□□□□ -0.74
PTCD2-206ENST00000503315 DISP3Q9P2K9 1392 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms