RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 VASH1Q7L8A9 365 aaPredicted RBP11.69□□□□□ -0.54
NIPBL-203ENST00000503274 TOR4AQ9NXH8 423 aa11.69□□□□□ -0.54
NIPBL-203ENST00000503274 ALDH1A1P00352 501 aa11.68□□□□□ -0.54
NIPBL-203ENST00000503274 NBPF20Q3BBV1 942 aa11.67□□□□□ -0.54
NIPBL-203ENST00000503274 ALG2Q9H553 416 aa11.67□□□□□ -0.54
NIPBL-203ENST00000503274 ZNF777Q9ULD5 760 aaPredicted RBP11.67□□□□□ -0.54
NIPBL-203ENST00000503274 ADH1CP00326 375 aa11.65□□□□□ -0.54
NIPBL-203ENST00000503274 GRM5P41594 1212 aa11.65□□□□□ -0.54
NIPBL-203ENST00000503274 HDGFL1Q5TGJ6 251 aa11.65□□□□□ -0.54
NIPBL-203ENST00000503274 KCTD15Q96SI1 283 aaPredicted RBP11.65□□□□□ -0.54
NIPBL-203ENST00000503274 CEP126Q9P2H0 1117 aa11.65□□□□□ -0.54
NIPBL-203ENST00000503274 WASF2Q9Y6W5 498 aa11.65□□□□□ -0.54
NIPBL-203ENST00000503274 J3QL48 77 aa11.64□□□□□ -0.55
NIPBL-203ENST00000503274 NR5A1Q13285 461 aa11.63□□□□□ -0.55
NIPBL-203ENST00000503274 ADAMTS19Q8TE59 1207 aa11.63□□□□□ -0.55
NIPBL-203ENST00000503274 GLMNQ92990 594 aa11.63□□□□□ -0.55
NIPBL-203ENST00000503274 ESPNB1AK53 854 aa11.62□□□□□ -0.55
NIPBL-203ENST00000503274 GIGYF1O75420 1035 aaPredicted RBP11.62□□□□□ -0.55
NIPBL-203ENST00000503274 SMPD1P17405 629 aa11.62□□□□□ -0.55
NIPBL-203ENST00000503274 FSHRP23945 695 aa11.62□□□□□ -0.55
NIPBL-203ENST00000503274 ZNF787Q6DD87 383 aa11.62□□□□□ -0.55
NIPBL-203ENST00000503274 FAM187AA6NFU0 413 aa11.61□□□□□ -0.55
NIPBL-203ENST00000503274 PKDCCQ504Y2 493 aa11.61□□□□□ -0.55
NIPBL-203ENST00000503274 CALR3Q96L12 384 aaKnown RBP11.61□□□□□ -0.55
NIPBL-203ENST00000503274 INTS6LQ5JSJ4 861 aaKnown RBP11.6□□□□□ -0.55
NIPBL-203ENST00000503274 RNF20Q5VTR2 975 aa11.6□□□□□ -0.55
NIPBL-203ENST00000503274 SEPT12Q8IYM1 358 aa11.6□□□□□ -0.55
NIPBL-203ENST00000503274 NNTQ13423 1086 aa11.59□□□□□ -0.55
NIPBL-203ENST00000503274 SLFNL1Q499Z3 407 aa11.59□□□□□ -0.55
NIPBL-203ENST00000503274 DGAT1O75907 488 aa11.58□□□□□ -0.56
NIPBL-203ENST00000503274 MYT1Q01538 1121 aa11.58□□□□□ -0.56
NIPBL-203ENST00000503274 ARID3CA6NKF2 412 aa11.57□□□□□ -0.56
NIPBL-203ENST00000503274 RAB15P59190 212 aa11.57□□□□□ -0.56
NIPBL-203ENST00000503274 CCDC125Q86Z20 511 aa11.57□□□□□ -0.56
NIPBL-203ENST00000503274 CCDC116Q8IYX3 515 aa11.57□□□□□ -0.56
NIPBL-203ENST00000503274 PHTF2Q8N3S3 785 aa11.57□□□□□ -0.56
NIPBL-203ENST00000503274 NR3C2P08235 984 aa11.56□□□□□ -0.56
NIPBL-203ENST00000503274 DHX9Q08211 1270 aaKnown RBP11.56□□□□□ -0.56
NIPBL-203ENST00000503274 RNF135Q8IUD6 432 aa11.56□□□□□ -0.56
NIPBL-203ENST00000503274 HPS1Q92902 700 aa11.55□□□□□ -0.56
NIPBL-203ENST00000503274 ERVH48-1M5A8F1 160 aa11.54□□□□□ -0.56
NIPBL-203ENST00000503274 SUPT5HO00267 1087 aaKnown RBP11.54□□□□□ -0.56
NIPBL-203ENST00000503274 PIK3CDO00329 1044 aa11.53□□□□□ -0.56
NIPBL-203ENST00000503274 PPP1R26Q5T8A7 1209 aaPredicted RBP11.53□□□□□ -0.56
NIPBL-203ENST00000503274 EMILIN1Q9Y6C2 1016 aa11.53□□□□□ -0.56
NIPBL-203ENST00000503274 NFATC2IPQ8NCF5 419 aa11.52□□□□□ -0.57
NIPBL-203ENST00000503274 CCDC85AQ96PX6 553 aaPredicted RBP11.52□□□□□ -0.57
NIPBL-203ENST00000503274 UCN2Q96RP3 112 aa11.52□□□□□ -0.57
NIPBL-203ENST00000503274 CHIC2Q9UKJ5 165 aa11.52□□□□□ -0.57
NIPBL-203ENST00000503274 ST8SIA5O15466 376 aa11.51□□□□□ -0.57
NIPBL-203ENST00000503274 PGPEP1Q9NXJ5 209 aa11.51□□□□□ -0.57
NIPBL-203ENST00000503274 PCDHB11Q9Y5F2 797 aa11.51□□□□□ -0.57
NIPBL-203ENST00000503274 AVPP01185 164 aa11.5□□□□□ -0.57
NIPBL-203ENST00000503274 SKIP12755 728 aa11.5□□□□□ -0.57
NIPBL-203ENST00000503274 WDR4P57081 412 aaKnown RBP11.5□□□□□ -0.57
NIPBL-203ENST00000503274 MAP7D1Q3KQU3 841 aa11.5□□□□□ -0.57
NIPBL-203ENST00000503274 TRIM52Q96A61 297 aa11.5□□□□□ -0.57
NIPBL-203ENST00000503274 KLF16Q9BXK1 252 aaPredicted RBP11.5□□□□□ -0.57
NIPBL-203ENST00000503274 TMPRSS4Q9NRS4 437 aa11.5□□□□□ -0.57
NIPBL-203ENST00000503274 TIMP2P16035 220 aa11.49□□□□□ -0.57
NIPBL-203ENST00000503274 TSGA10IPQ3SY00 556 aa11.49□□□□□ -0.57
NIPBL-203ENST00000503274 TBC1D9Q6ZT07 1266 aa11.49□□□□□ -0.57
NIPBL-203ENST00000503274 PLPP7Q8NBV4 271 aa11.49□□□□□ -0.57
NIPBL-203ENST00000503274 ITPKCQ96DU7 683 aa11.49□□□□□ -0.57
NIPBL-203ENST00000503274 C1orf115Q9H7X2 142 aa11.49□□□□□ -0.57
NIPBL-203ENST00000503274 DOLKQ9UPQ8 538 aa11.49□□□□□ -0.57
NIPBL-203ENST00000503274 ZIC2O95409 532 aaPredicted RBP11.48□□□□□ -0.57
NIPBL-203ENST00000503274 PPP1R12CQ9BZL4 782 aa11.48□□□□□ -0.57
NIPBL-203ENST00000503274 PALM3A6NDB9 673 aaPredicted RBP11.47□□□□□ -0.57
NIPBL-203ENST00000503274 ATP9BO43861 1147 aa11.47□□□□□ -0.57
NIPBL-203ENST00000503274 ZNF784Q8NCA9 323 aaPredicted RBP11.47□□□□□ -0.57
NIPBL-203ENST00000503274 CCDC97Q96F63 343 aaPredicted RBP11.47□□□□□ -0.57
NIPBL-203ENST00000503274 CDCA7Q9BWT1 371 aaPredicted RBP11.47□□□□□ -0.57
NIPBL-203ENST00000503274 AAASQ9NRG9 546 aa11.47□□□□□ -0.57
NIPBL-203ENST00000503274 TFIP11Q9UBB9 837 aaKnown RBP11.47□□□□□ -0.57
NIPBL-203ENST00000503274 ZNF775Q96BV0 537 aaPredicted RBP11.46□□□□□ -0.57
NIPBL-203ENST00000503274 ZFAND3Q9H8U3 227 aa11.46□□□□□ -0.57
NIPBL-203ENST00000503274 SERPINA10Q9UK55 444 aa11.46□□□□□ -0.57
NIPBL-203ENST00000503274 USP17L5A8MUK1 530 aa11.45□□□□□ -0.58
NIPBL-203ENST00000503274 POTECB2RU33 542 aa11.45□□□□□ -0.58
NIPBL-203ENST00000503274 CAPN5O15484 640 aaPredicted RBP11.45□□□□□ -0.58
NIPBL-203ENST00000503274 CTC1Q2NKJ3 1217 aa11.45□□□□□ -0.58
NIPBL-203ENST00000503274 CYLDQ9NQC7 956 aa11.45□□□□□ -0.58
NIPBL-203ENST00000503274 LZTS3O60299 673 aaPredicted RBP11.44□□□□□ -0.58
NIPBL-203ENST00000503274 LILRA1O75019 489 aa11.44□□□□□ -0.58
NIPBL-203ENST00000503274 SMCPP49901 116 aaPredicted RBP11.44□□□□□ -0.58
NIPBL-203ENST00000503274 ERVK-9P63128 1117 aa11.44□□□□□ -0.58
NIPBL-203ENST00000503274 USP4Q13107 963 aa11.44□□□□□ -0.58
NIPBL-203ENST00000503274 OXLD1Q5BKU9 147 aa11.44□□□□□ -0.58
NIPBL-203ENST00000503274 CC2D2BQ6DHV5 1058 aa11.44□□□□□ -0.58
NIPBL-203ENST00000503274 CCDC82Q8N4S0 544 aa11.43□□□□□ -0.58
NIPBL-203ENST00000503274 ESF1Q9H501 851 aaKnown RBP11.43□□□□□ -0.58
NIPBL-203ENST00000503274 DACH1Q9UI36 760 aa11.43□□□□□ -0.58
NIPBL-203ENST00000503274 MAFBQ9Y5Q3 323 aaPredicted RBP11.43□□□□□ -0.58
NIPBL-203ENST00000503274 AXIN1O15169 862 aa11.42□□□□□ -0.58
NIPBL-203ENST00000503274 MYCP01106 439 aaPredicted RBP11.42□□□□□ -0.58
NIPBL-203ENST00000503274 SCTRP47872 440 aa11.42□□□□□ -0.58
NIPBL-203ENST00000503274 EML3Q32P44 896 aa11.42□□□□□ -0.58
NIPBL-203ENST00000503274 PLEKHM2Q8IWE5 1019 aa11.42□□□□□ -0.58
NIPBL-203ENST00000503274 CRIPAKQ8N1N5 446 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms