RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 U2AF1Q01081 240 aaKnown RBP eCLIP11.98□□□□□ -0.49
NR1I3-216ENST00000502848 AHDC1Q5TGY3 1603 aaPredicted RBP11.97□□□□□ -0.49
NR1I3-216ENST00000502848 NEFMP07197 916 aa11.97□□□□□ -0.49
NR1I3-216ENST00000502848 PLEKHF1Q96S99 279 aa11.97□□□□□ -0.49
NR1I3-216ENST00000502848 KDRP35968 1356 aa11.96□□□□□ -0.49
NR1I3-216ENST00000502848 RRS1Q15050 365 aaKnown RBP11.96□□□□□ -0.49
NR1I3-216ENST00000502848 CPDO75976 1380 aa11.95□□□□□ -0.5
NR1I3-216ENST00000502848 CRYBG1Q9Y4K1 1723 aa11.95□□□□□ -0.5
NR1I3-216ENST00000502848 MAPK8IP3Q9UPT6 1336 aa11.95□□□□□ -0.5
NR1I3-216ENST00000502848 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
NR1I3-216ENST00000502848 GCP02774 474 aa11.95□□□□□ -0.5
NR1I3-216ENST00000502848 AMPHP49418 695 aa11.95□□□□□ -0.5
NR1I3-216ENST00000502848 IP6K1Q92551 441 aa11.95□□□□□ -0.5
NR1I3-216ENST00000502848 RSPH6AQ9H0K4 717 aa11.95□□□□□ -0.5
NR1I3-216ENST00000502848 FOXD4L1Q9NU39 408 aa11.95□□□□□ -0.5
NR1I3-216ENST00000502848 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
NR1I3-216ENST00000502848 IGSF1Q8N6C5 1336 aa11.94□□□□□ -0.5
NR1I3-216ENST00000502848 PPM1GO15355 546 aaPredicted RBP11.94□□□□□ -0.5
NR1I3-216ENST00000502848 HOXC9P31274 260 aa11.94□□□□□ -0.5
NR1I3-216ENST00000502848 EIF4A2Q14240 407 aaKnown RBP11.94□□□□□ -0.5
NR1I3-216ENST00000502848 ARHGEF25Q86VW2 580 aa11.94□□□□□ -0.5
NR1I3-216ENST00000502848 WDR63Q8IWG1 891 aa11.94□□□□□ -0.5
NR1I3-216ENST00000502848 TCP11L2Q8N4U5 519 aa11.94□□□□□ -0.5
NR1I3-216ENST00000502848 IL16Q14005 1332 aa11.93□□□□□ -0.5
NR1I3-216ENST00000502848 LTN1O94822 1766 aa11.93□□□□□ -0.5
NR1I3-216ENST00000502848 APAF1O14727 1248 aa11.93□□□□□ -0.5
NR1I3-216ENST00000502848 GOLGA2Q08379 1002 aa11.93□□□□□ -0.5
NR1I3-216ENST00000502848 CAMTA1Q9Y6Y1 1673 aa11.93□□□□□ -0.5
NR1I3-216ENST00000502848 E9PSI1 815 aa11.92□□□□□ -0.5
NR1I3-216ENST00000502848 LMOD3Q0VAK6 560 aa11.92□□□□□ -0.5
NR1I3-216ENST00000502848 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
NR1I3-216ENST00000502848 CALD1Q05682 793 aaKnown RBP11.91□□□□□ -0.5
NR1I3-216ENST00000502848 HSP90AB2PQ58FF8 381 aa11.91□□□□□ -0.5
NR1I3-216ENST00000502848 WWC1Q8IX03 1113 aa11.91□□□□□ -0.5
NR1I3-216ENST00000502848 TRMT2AQ8IZ69 625 aaKnown RBP11.91□□□□□ -0.5
NR1I3-216ENST00000502848 ROBO1Q9Y6N7 1651 aa11.91□□□□□ -0.5
NR1I3-216ENST00000502848 COL22A1Q8NFW1 1626 aaPredicted RBP11.9□□□□□ -0.5
NR1I3-216ENST00000502848 FBLN1P23142 703 aa11.9□□□□□ -0.5
NR1I3-216ENST00000502848 PRKAR2BP31323 418 aa11.9□□□□□ -0.5
NR1I3-216ENST00000502848 TMPOP42166 694 aaKnown RBP11.9□□□□□ -0.5
NR1I3-216ENST00000502848 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.5
NR1I3-216ENST00000502848 TOM1O60784 492 aa11.89□□□□□ -0.51
NR1I3-216ENST00000502848 XPCQ01831 940 aaPredicted RBP11.89□□□□□ -0.51
NR1I3-216ENST00000502848 SLFN5Q08AF3 891 aa11.89□□□□□ -0.51
NR1I3-216ENST00000502848 NFE2L2Q16236 605 aa11.89□□□□□ -0.51
NR1I3-216ENST00000502848 RNF123Q5XPI4 1314 aa11.88□□□□□ -0.51
NR1I3-216ENST00000502848 LMO7Q8WWI1 1683 aa11.88□□□□□ -0.51
NR1I3-216ENST00000502848 ZBTB22O15209 634 aa11.88□□□□□ -0.51
NR1I3-216ENST00000502848 NUTM2GQ5VZR2 741 aa11.88□□□□□ -0.51
NR1I3-216ENST00000502848 ERICH6BQ5W0A0 696 aa11.88□□□□□ -0.51
NR1I3-216ENST00000502848 LRRC59Q96AG4 307 aaKnown RBP11.88□□□□□ -0.51
NR1I3-216ENST00000502848 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
NR1I3-216ENST00000502848 ABCA3Q99758 1704 aa11.88□□□□□ -0.51
NR1I3-216ENST00000502848 CT47B1P0C2W7 299 aaPredicted RBP11.87□□□□□ -0.51
NR1I3-216ENST00000502848 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
NR1I3-216ENST00000502848 LMOD2Q6P5Q4 547 aa11.87□□□□□ -0.51
NR1I3-216ENST00000502848 COL18A1P39060 1754 aa11.87□□□□□ -0.51
NR1I3-216ENST00000502848 SOX12O15370 315 aa11.86□□□□□ -0.51
NR1I3-216ENST00000502848 HTATSF1O43719 755 aaKnown RBP11.86□□□□□ -0.51
NR1I3-216ENST00000502848 SULT6B1Q6IMI4 303 aa11.86□□□□□ -0.51
NR1I3-216ENST00000502848 EYA1Q99502 592 aa11.86□□□□□ -0.51
NR1I3-216ENST00000502848 ERBB3P21860 1342 aa11.86□□□□□ -0.51
NR1I3-216ENST00000502848 NEFLP07196 543 aa11.85□□□□□ -0.51
NR1I3-216ENST00000502848 GAS2L2Q8NHY3 880 aa11.85□□□□□ -0.51
NR1I3-216ENST00000502848 HMOX1P09601 288 aa11.84□□□□□ -0.51
NR1I3-216ENST00000502848 RIPK4P57078 832 aa11.84□□□□□ -0.51
NR1I3-216ENST00000502848 DDX17Q92841 729 aaKnown RBP11.84□□□□□ -0.51
NR1I3-216ENST00000502848 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
NR1I3-216ENST00000502848 TRIM35Q9UPQ4 493 aa11.84□□□□□ -0.51
NR1I3-216ENST00000502848 COL16A1Q07092 1604 aaPredicted RBP11.84□□□□□ -0.51
NR1I3-216ENST00000502848 ANKRD24Q8TF21 1146 aa11.83□□□□□ -0.52
NR1I3-216ENST00000502848 OVOS2A0A0G2JMS6 1433 aa11.83□□□□□ -0.52
NR1I3-216ENST00000502848 KIAA0232Q92628 1395 aa11.82□□□□□ -0.52
NR1I3-216ENST00000502848 AMOTQ4VCS5 1084 aa11.82□□□□□ -0.52
NR1I3-216ENST00000502848 ZNF428Q96B54 188 aa11.82□□□□□ -0.52
NR1I3-216ENST00000502848 CDCA7LQ96GN5 454 aa11.82□□□□□ -0.52
NR1I3-216ENST00000502848 PHACTR3Q96KR7 559 aa11.82□□□□□ -0.52
NR1I3-216ENST00000502848 RCAN3Q9UKA8 241 aa11.82□□□□□ -0.52
NR1I3-216ENST00000502848 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
NR1I3-216ENST00000502848 U3KPZ7 1027 aaPredicted RBP11.82□□□□□ -0.52
NR1I3-216ENST00000502848 PHLPP1O60346 1717 aa11.81□□□□□ -0.52
NR1I3-216ENST00000502848 GNAI1P63096 354 aa11.81□□□□□ -0.52
NR1I3-216ENST00000502848 AEBP1Q8IUX7 1158 aa11.81□□□□□ -0.52
NR1I3-216ENST00000502848 IFT57Q9NWB7 429 aa11.81□□□□□ -0.52
NR1I3-216ENST00000502848 BABAM1Q9NWV8 329 aa11.81□□□□□ -0.52
NR1I3-216ENST00000502848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.81□□□□□ -0.52
NR1I3-216ENST00000502848 GTF3C3Q9Y5Q9 886 aa11.81□□□□□ -0.52
NR1I3-216ENST00000502848 LRRC37A3O60309 1634 aa11.81□□□□□ -0.52
NR1I3-216ENST00000502848 COL14A1Q05707 1796 aaKnown RBP11.8□□□□□ -0.52
NR1I3-216ENST00000502848 MYCNP04198 464 aaPredicted RBP11.8□□□□□ -0.52
NR1I3-216ENST00000502848 HAP1P54257 671 aaPredicted RBP11.8□□□□□ -0.52
NR1I3-216ENST00000502848 PRDM11Q9NQV5 511 aa11.8□□□□□ -0.52
NR1I3-216ENST00000502848 RRP7AQ9Y3A4 280 aaKnown RBP11.8□□□□□ -0.52
NR1I3-216ENST00000502848 COL5A2P05997 1499 aaPredicted RBP11.79□□□□□ -0.52
NR1I3-216ENST00000502848 ZC3H6P61129 1189 aaKnown RBP11.79□□□□□ -0.52
NR1I3-216ENST00000502848 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
NR1I3-216ENST00000502848 NBPF6Q5VWK0 638 aa11.79□□□□□ -0.52
NR1I3-216ENST00000502848 NBPF4Q96M43 638 aa11.79□□□□□ -0.52
NR1I3-216ENST00000502848 AXIN2Q9Y2T1 843 aa11.79□□□□□ -0.52
NR1I3-216ENST00000502848 SUPT16HQ9Y5B9 1047 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms