RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 PEAK1Q9H792 1746 aa9.66□□□□□ -0.86
CPNE4-202ENST00000502818 IQSEC2Q5JU85 1478 aa9.66□□□□□ -0.86
CPNE4-202ENST00000502818 PSME1Q06323 249 aa9.66□□□□□ -0.86
CPNE4-202ENST00000502818 MST1RQ04912 1400 aa9.66□□□□□ -0.86
CPNE4-202ENST00000502818 MARF1Q9Y4F3 1742 aaKnown RBP9.65□□□□□ -0.86
CPNE4-202ENST00000502818 EIF4A2Q14240 407 aaKnown RBP9.65□□□□□ -0.86
CPNE4-202ENST00000502818 AEBP1Q8IUX7 1158 aa9.65□□□□□ -0.86
CPNE4-202ENST00000502818 PHACTR3Q96KR7 559 aa9.65□□□□□ -0.86
CPNE4-202ENST00000502818 DUSP27Q5VZP5 1158 aa9.65□□□□□ -0.86
CPNE4-202ENST00000502818 WWC1Q8IX03 1113 aa9.65□□□□□ -0.86
CPNE4-202ENST00000502818 RSPH6AQ9H0K4 717 aa9.65□□□□□ -0.86
CPNE4-202ENST00000502818 LRRC7Q96NW7 1537 aa9.65□□□□□ -0.87
CPNE4-202ENST00000502818 XIRP1Q702N8 1843 aaKnown RBP9.65□□□□□ -0.87
CPNE4-202ENST00000502818 ATF3P18847 181 aa9.64□□□□□ -0.87
CPNE4-202ENST00000502818 PRKAR2BP31323 418 aa9.64□□□□□ -0.87
CPNE4-202ENST00000502818 CDK12Q9NYV4 1490 aaPredicted RBP9.64□□□□□ -0.87
CPNE4-202ENST00000502818 SLFN5Q08AF3 891 aa9.64□□□□□ -0.87
CPNE4-202ENST00000502818 KRT28Q7Z3Y7 464 aa9.64□□□□□ -0.87
CPNE4-202ENST00000502818 LMOD2Q6P5Q4 547 aa9.63□□□□□ -0.87
CPNE4-202ENST00000502818 TMPOP42166 694 aaKnown RBP9.62□□□□□ -0.87
CPNE4-202ENST00000502818 GOLGA2Q08379 1002 aa9.62□□□□□ -0.87
CPNE4-202ENST00000502818 PDE3BQ13370 1112 aa9.62□□□□□ -0.87
CPNE4-202ENST00000502818 TRIM35Q9UPQ4 493 aa9.62□□□□□ -0.87
CPNE4-202ENST00000502818 TRMT2AQ8IZ69 625 aaKnown RBP9.62□□□□□ -0.87
CPNE4-202ENST00000502818 ZBTB7CA1YPR0 619 aa9.61□□□□□ -0.87
CPNE4-202ENST00000502818 PLIN1O60240 522 aa9.61□□□□□ -0.87
CPNE4-202ENST00000502818 RNF123Q5XPI4 1314 aa9.61□□□□□ -0.87
CPNE4-202ENST00000502818 FCHSD2O94868 740 aa9.61□□□□□ -0.87
CPNE4-202ENST00000502818 AMPHP49418 695 aa9.61□□□□□ -0.87
CPNE4-202ENST00000502818 SULT6B1Q6IMI4 303 aa9.61□□□□□ -0.87
CPNE4-202ENST00000502818 BRINP3Q76B58 766 aa9.61□□□□□ -0.87
CPNE4-202ENST00000502818 LTV1Q96GA3 475 aaPredicted RBP9.61□□□□□ -0.87
CPNE4-202ENST00000502818 THUMPD2Q9BTF0 503 aaKnown RBP9.61□□□□□ -0.87
CPNE4-202ENST00000502818 RCAN3Q9UKA8 241 aa9.61□□□□□ -0.87
CPNE4-202ENST00000502818 MSH6P52701 1360 aa9.6□□□□□ -0.87
CPNE4-202ENST00000502818 HOXC9P31274 260 aa9.6□□□□□ -0.87
CPNE4-202ENST00000502818 CADPS2Q86UW7 1296 aa9.6□□□□□ -0.87
CPNE4-202ENST00000502818 CABLES1Q8TDN4 633 aa9.6□□□□□ -0.87
CPNE4-202ENST00000502818 RIPK4P57078 832 aa9.59□□□□□ -0.87
CPNE4-202ENST00000502818 OTUD5Q96G74 571 aa9.59□□□□□ -0.87
CPNE4-202ENST00000502818 EYA1Q99502 592 aa9.59□□□□□ -0.87
CPNE4-202ENST00000502818 NCOA3Q9Y6Q9 1424 aa9.59□□□□□ -0.87
CPNE4-202ENST00000502818 SBNO1A3KN83 1393 aa9.59□□□□□ -0.87
CPNE4-202ENST00000502818 GCP02774 474 aa9.59□□□□□ -0.87
CPNE4-202ENST00000502818 NEFLP07196 543 aa9.59□□□□□ -0.87
CPNE4-202ENST00000502818 DCCP43146 1447 aa9.59□□□□□ -0.87
CPNE4-202ENST00000502818 USHBP1Q8N6Y0 703 aa9.59□□□□□ -0.87
CPNE4-202ENST00000502818 TRPM3Q9HCF6 1732 aaPredicted RBP9.59□□□□□ -0.87
CPNE4-202ENST00000502818 NFAT5O94916 1531 aa9.59□□□□□ -0.87
CPNE4-202ENST00000502818 FAM83GA6ND36 823 aa9.58□□□□□ -0.88
CPNE4-202ENST00000502818 TSR2Q969E8 191 aaKnown RBP9.58□□□□□ -0.88
CPNE4-202ENST00000502818 SLAIN2Q9P270 581 aa9.58□□□□□ -0.88
CPNE4-202ENST00000502818 FLT4P35916 1363 aa9.58□□□□□ -0.88
CPNE4-202ENST00000502818 MAPK8IP3Q9UPT6 1336 aa9.58□□□□□ -0.88
CPNE4-202ENST00000502818 DCTN1Q14203 1278 aa9.58□□□□□ -0.88
CPNE4-202ENST00000502818 AXIN2Q9Y2T1 843 aa9.58□□□□□ -0.88
CPNE4-202ENST00000502818 E9PSI1 815 aa9.57□□□□□ -0.88
CPNE4-202ENST00000502818 RRP1P56182 461 aaKnown RBP9.57□□□□□ -0.88
CPNE4-202ENST00000502818 ZC3H6P61129 1189 aaKnown RBP9.57□□□□□ -0.88
CPNE4-202ENST00000502818 CCDC27Q2M243 656 aa9.57□□□□□ -0.88
CPNE4-202ENST00000502818 C20orf194Q5TEA3 1177 aa9.57□□□□□ -0.88
CPNE4-202ENST00000502818 USP54Q70EL1 1684 aa9.57□□□□□ -0.88
CPNE4-202ENST00000502818 BCAR3O75815 825 aa9.56□□□□□ -0.88
CPNE4-202ENST00000502818 LRRC59Q96AG4 307 aaKnown RBP9.56□□□□□ -0.88
CPNE4-202ENST00000502818 MED1Q15648 1581 aaPredicted RBP9.56□□□□□ -0.88
CPNE4-202ENST00000502818 USP19O94966 1318 aa9.56□□□□□ -0.88
CPNE4-202ENST00000502818 PXDNQ92626 1479 aa9.56□□□□□ -0.88
CPNE4-202ENST00000502818 NFE2L2Q16236 605 aa9.56□□□□□ -0.88
CPNE4-202ENST00000502818 ARHGEF25Q86VW2 580 aa9.56□□□□□ -0.88
CPNE4-202ENST00000502818 RGPD1P0DJD0 1748 aa9.56□□□□□ -0.88
CPNE4-202ENST00000502818 WDR63Q8IWG1 891 aa9.55□□□□□ -0.88
CPNE4-202ENST00000502818 IP6K1Q92551 441 aa9.55□□□□□ -0.88
CPNE4-202ENST00000502818 KIF1AQ12756 1690 aa9.55□□□□□ -0.88
CPNE4-202ENST00000502818 IGSF1Q8N6C5 1336 aa9.55□□□□□ -0.88
CPNE4-202ENST00000502818 NBPF6Q5VWK0 638 aa9.55□□□□□ -0.88
CPNE4-202ENST00000502818 ERICH6Q7L0X2 663 aa9.55□□□□□ -0.88
CPNE4-202ENST00000502818 NBPF4Q96M43 638 aa9.55□□□□□ -0.88
CPNE4-202ENST00000502818 SLIT3O75094 1523 aa9.54□□□□□ -0.88
CPNE4-202ENST00000502818 ALS2Q96Q42 1657 aa9.54□□□□□ -0.88
CPNE4-202ENST00000502818 MTHFSDQ2M296 383 aaKnown RBP9.54□□□□□ -0.88
CPNE4-202ENST00000502818 NGEFQ8N5V2 710 aa9.54□□□□□ -0.88
CPNE4-202ENST00000502818 SPATA31A3Q5VYP0 1347 aa9.54□□□□□ -0.88
CPNE4-202ENST00000502818 NPHP3Q7Z494 1330 aa9.54□□□□□ -0.88
CPNE4-202ENST00000502818 FANCIQ9NVI1 1328 aa9.54□□□□□ -0.88
CPNE4-202ENST00000502818 CHRNA2Q15822 529 aa9.53□□□□□ -0.88
CPNE4-202ENST00000502818 MCM10Q7L590 875 aa9.53□□□□□ -0.88
CPNE4-202ENST00000502818 EXOC6Q8TAG9 804 aa9.53□□□□□ -0.88
CPNE4-202ENST00000502818 BCL2L13Q9BXK5 485 aa9.53□□□□□ -0.88
CPNE4-202ENST00000502818 LAS1LQ9Y4W2 734 aaKnown RBP9.53□□□□□ -0.88
CPNE4-202ENST00000502818 ARHGEF10O15013 1369 aa9.53□□□□□ -0.88
CPNE4-202ENST00000502818 LTN1O94822 1766 aa9.53□□□□□ -0.88
CPNE4-202ENST00000502818 KCNH5Q8NCM2 988 aa9.53□□□□□ -0.88
CPNE4-202ENST00000502818 TNNQ9UQP3 1299 aa9.53□□□□□ -0.88
CPNE4-202ENST00000502818 TNS3Q68CZ2 1445 aa9.52□□□□□ -0.88
CPNE4-202ENST00000502818 EXOSC9Q06265 439 aaKnown RBP9.52□□□□□ -0.89
CPNE4-202ENST00000502818 MMRN1Q13201 1228 aa9.52□□□□□ -0.89
CPNE4-202ENST00000502818 B4GALNT3Q6L9W6 998 aa9.52□□□□□ -0.89
CPNE4-202ENST00000502818 CDAN1Q8IWY9 1227 aa9.52□□□□□ -0.89
CPNE4-202ENST00000502818 KDRP35968 1356 aa9.52□□□□□ -0.89
CPNE4-202ENST00000502818 FXR2P51116 673 aaKnown RBP eCLIP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms