RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 ITPKCQ96DU7 683 aa5.4□□□□□ -1.54
SMAD1-203ENST00000502342 GPR37L1O60883 481 aa5.39□□□□□ -1.55
SMAD1-203ENST00000502342 GIGYF1O75420 1035 aaPredicted RBP5.39□□□□□ -1.55
SMAD1-203ENST00000502342 BMP1P13497 986 aa5.39□□□□□ -1.55
SMAD1-203ENST00000502342 TIMP2P16035 220 aa5.39□□□□□ -1.55
SMAD1-203ENST00000502342 SMCPP49901 116 aaPredicted RBP5.39□□□□□ -1.55
SMAD1-203ENST00000502342 VAC14Q08AM6 782 aa5.39□□□□□ -1.55
SMAD1-203ENST00000502342 NR1H3Q13133 447 aa5.39□□□□□ -1.55
SMAD1-203ENST00000502342 MCM6Q14566 821 aa5.39□□□□□ -1.55
SMAD1-203ENST00000502342 POM121Q96HA1 1249 aa5.39□□□□□ -1.55
SMAD1-203ENST00000502342 KLF16Q9BXK1 252 aaPredicted RBP5.39□□□□□ -1.55
SMAD1-203ENST00000502342 ATP13A2Q9NQ11 1180 aa5.39□□□□□ -1.55
SMAD1-203ENST00000502342 TMPRSS4Q9NRS4 437 aa5.39□□□□□ -1.55
SMAD1-203ENST00000502342 IRF5Q13568 498 aa5.38□□□□□ -1.55
SMAD1-203ENST00000502342 INTS6LQ5JSJ4 861 aaKnown RBP5.38□□□□□ -1.55
SMAD1-203ENST00000502342 PPP1R26Q5T8A7 1209 aaPredicted RBP5.38□□□□□ -1.55
SMAD1-203ENST00000502342 CCDC116Q8IYX3 515 aa5.38□□□□□ -1.55
SMAD1-203ENST00000502342 CRIPAKQ8N1N5 446 aa5.38□□□□□ -1.55
SMAD1-203ENST00000502342 COG6Q9Y2V7 657 aa5.38□□□□□ -1.55
SMAD1-203ENST00000502342 MAP4K5Q9Y4K4 846 aa5.38□□□□□ -1.55
SMAD1-203ENST00000502342 C11orf95C9JLR9 678 aaPredicted RBP5.37□□□□□ -1.55
SMAD1-203ENST00000502342 CBLBQ13191 982 aa5.37□□□□□ -1.55
SMAD1-203ENST00000502342 C6orf118Q5T5N4 469 aa5.37□□□□□ -1.55
SMAD1-203ENST00000502342 TRIM46Q7Z4K8 759 aa5.37□□□□□ -1.55
SMAD1-203ENST00000502342 ERVH48-1M5A8F1 160 aa5.36□□□□□ -1.55
SMAD1-203ENST00000502342 SOCS7O14512 581 aa5.36□□□□□ -1.55
SMAD1-203ENST00000502342 SNRPBP14678 240 aaKnown RBP5.36□□□□□ -1.55
SMAD1-203ENST00000502342 UBTFP17480 764 aaKnown RBP5.36□□□□□ -1.55
SMAD1-203ENST00000502342 PURBQ96QR8 312 aaKnown RBP5.36□□□□□ -1.55
SMAD1-203ENST00000502342 CDV3Q9UKY7 258 aaKnown RBP5.36□□□□□ -1.55
SMAD1-203ENST00000502342 ZNF330Q9Y3S2 320 aaPredicted RBP5.36□□□□□ -1.55
SMAD1-203ENST00000502342 EMILIN1Q9Y6C2 1016 aa5.36□□□□□ -1.55
SMAD1-203ENST00000502342 RAD21O60216 631 aa5.35□□□□□ -1.55
SMAD1-203ENST00000502342 ADD1P35611 737 aaKnown RBP5.35□□□□□ -1.55
SMAD1-203ENST00000502342 FLIIQ13045 1269 aa5.35□□□□□ -1.55
SMAD1-203ENST00000502342 NBPF20Q3BBV1 942 aa5.35□□□□□ -1.55
SMAD1-203ENST00000502342 TSGA10IPQ3SY00 556 aa5.35□□□□□ -1.55
SMAD1-203ENST00000502342 MRPL14Q6P1L8 145 aaKnown RBP5.35□□□□□ -1.55
SMAD1-203ENST00000502342 CLUAP1Q96AJ1 413 aa5.35□□□□□ -1.55
SMAD1-203ENST00000502342 AGBL1Q96MI9 1066 aa5.35□□□□□ -1.55
SMAD1-203ENST00000502342 ZFP42Q96MM3 310 aa5.35□□□□□ -1.55
SMAD1-203ENST00000502342 PGPEP1Q9NXJ5 209 aa5.35□□□□□ -1.55
SMAD1-203ENST00000502342 CEP126Q9P2H0 1117 aa5.35□□□□□ -1.55
SMAD1-203ENST00000502342 DHX9Q08211 1270 aaKnown RBP5.34□□□□□ -1.55
SMAD1-203ENST00000502342 SOBPA7XYQ1 873 aa5.33□□□□□ -1.56
SMAD1-203ENST00000502342 ESPNB1AK53 854 aa5.33□□□□□ -1.56
SMAD1-203ENST00000502342 BMP2P12643 396 aa5.33□□□□□ -1.56
SMAD1-203ENST00000502342 EIF4G2P78344 907 aaKnown RBP eCLIP5.33□□□□□ -1.56
SMAD1-203ENST00000502342 RELBQ01201 579 aa5.33□□□□□ -1.56
SMAD1-203ENST00000502342 SCARF1Q14162 830 aa5.33□□□□□ -1.56
SMAD1-203ENST00000502342 ZNF784Q8NCA9 323 aaPredicted RBP5.33□□□□□ -1.56
SMAD1-203ENST00000502342 ZNF395Q9H8N7 513 aaPredicted RBP5.33□□□□□ -1.56
SMAD1-203ENST00000502342 CYLDQ9NQC7 956 aa5.33□□□□□ -1.56
SMAD1-203ENST00000502342 FIGNL2A6NMB9 653 aa5.32□□□□□ -1.56
SMAD1-203ENST00000502342 MCCD1P59942 119 aaPredicted RBP5.32□□□□□ -1.56
SMAD1-203ENST00000502342 SEMA3FQ13275 785 aa5.32□□□□□ -1.56
SMAD1-203ENST00000502342 WASHC4Q2M389 1173 aa5.32□□□□□ -1.56
SMAD1-203ENST00000502342 WWC1Q8IX03 1113 aa5.32□□□□□ -1.56
SMAD1-203ENST00000502342 CDCA7Q9BWT1 371 aaPredicted RBP5.32□□□□□ -1.56
SMAD1-203ENST00000502342 SENP2Q9HC62 589 aa5.32□□□□□ -1.56
SMAD1-203ENST00000502342 PCDHB11Q9Y5F2 797 aa5.32□□□□□ -1.56
SMAD1-203ENST00000502342 POM121CA8CG34 1229 aa5.31□□□□□ -1.56
SMAD1-203ENST00000502342 LILRA1O75019 489 aa5.31□□□□□ -1.56
SMAD1-203ENST00000502342 UPP2O95045 317 aa5.31□□□□□ -1.56
SMAD1-203ENST00000502342 RNF20Q5VTR2 975 aa5.31□□□□□ -1.56
SMAD1-203ENST00000502342 ZNF592Q92610 1267 aa5.31□□□□□ -1.56
SMAD1-203ENST00000502342 ZNF775Q96BV0 537 aaPredicted RBP5.31□□□□□ -1.56
SMAD1-203ENST00000502342 SLFNL1Q499Z3 407 aa5.3□□□□□ -1.56
SMAD1-203ENST00000502342 Q6ZVU0 165 aa5.3□□□□□ -1.56
SMAD1-203ENST00000502342 SEPT12Q8IYM1 358 aa5.3□□□□□ -1.56
SMAD1-203ENST00000502342 LINC00528Q8N1L1 170 aa5.3□□□□□ -1.56
SMAD1-203ENST00000502342 MEIOBQ8N635 442 aa5.3□□□□□ -1.56
SMAD1-203ENST00000502342 TRIM47Q96LD4 638 aa5.3□□□□□ -1.56
SMAD1-203ENST00000502342 CCDC85AQ96PX6 553 aaPredicted RBP5.3□□□□□ -1.56
SMAD1-203ENST00000502342 TSEN34Q9BSV6 310 aaKnown RBP5.3□□□□□ -1.56
SMAD1-203ENST00000502342 ESF1Q9H501 851 aaKnown RBP5.3□□□□□ -1.56
SMAD1-203ENST00000502342 SCTRP47872 440 aa5.29□□□□□ -1.56
SMAD1-203ENST00000502342 HDGFL1Q5TGJ6 251 aa5.29□□□□□ -1.56
SMAD1-203ENST00000502342 RNF135Q8IUD6 432 aa5.29□□□□□ -1.56
SMAD1-203ENST00000502342 PHTF2Q8N3S3 785 aa5.29□□□□□ -1.56
SMAD1-203ENST00000502342 KIFC2Q96AC6 838 aa5.29□□□□□ -1.56
SMAD1-203ENST00000502342 GTF3C3Q9Y5Q9 886 aa5.29□□□□□ -1.56
SMAD1-203ENST00000502342 PTGIRP43119 386 aa5.28□□□□□ -1.56
SMAD1-203ENST00000502342 CTSOP43234 321 aaPredicted RBP5.28□□□□□ -1.56
SMAD1-203ENST00000502342 OXLD1Q5BKU9 147 aa5.28□□□□□ -1.56
SMAD1-203ENST00000502342 KDF1Q8NAX2 398 aaPredicted RBP5.28□□□□□ -1.56
SMAD1-203ENST00000502342 TRIM52Q96A61 297 aa5.28□□□□□ -1.56
SMAD1-203ENST00000502342 INSM2Q96T92 566 aaPredicted RBP5.28□□□□□ -1.56
SMAD1-203ENST00000502342 PIK3CDO00329 1044 aa5.27□□□□□ -1.57
SMAD1-203ENST00000502342 MAN1A2O60476 641 aa5.27□□□□□ -1.57
SMAD1-203ENST00000502342 ADH1AP07327 375 aa5.27□□□□□ -1.57
SMAD1-203ENST00000502342 VEGFBP49765 207 aa5.27□□□□□ -1.57
SMAD1-203ENST00000502342 CC2D2BQ6DHV5 1058 aa5.27□□□□□ -1.57
SMAD1-203ENST00000502342 ALG2Q9H553 416 aa5.27□□□□□ -1.57
SMAD1-203ENST00000502342 POLMQ9NP87 494 aaPredicted RBP5.27□□□□□ -1.57
SMAD1-203ENST00000502342 SOS2Q07890 1332 aaPredicted RBP5.26□□□□□ -1.57
SMAD1-203ENST00000502342 TTLL8A6PVC2 850 aa5.26□□□□□ -1.57
SMAD1-203ENST00000502342 ATP5J2-PTCD1G3V325 749 aa5.26□□□□□ -1.57
SMAD1-203ENST00000502342 MEN1O00255 615 aa5.26□□□□□ -1.57
SMAD1-203ENST00000502342 SPINT1O43278 529 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms