RNA–Protein interactions for RNA: ENST00000502187.5

LINC01550-202, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-202ENST00000502187 NPHP3Q7Z494 1330 aa12.04□□□□□ -0.48
LINC01550-202ENST00000502187 ADAMTS8Q9UP79 889 aa12.03□□□□□ -0.48
LINC01550-202ENST00000502187 PPM1GO15355 546 aaPredicted RBP12.03□□□□□ -0.48
LINC01550-202ENST00000502187 FBLN1P23142 703 aa12.03□□□□□ -0.48
LINC01550-202ENST00000502187 EMILIN1Q9Y6C2 1016 aa12.03□□□□□ -0.48
LINC01550-202ENST00000502187 SOX12O15370 315 aa12.02□□□□□ -0.48
LINC01550-202ENST00000502187 RRS1Q15050 365 aaKnown RBP12.02□□□□□ -0.48
LINC01550-202ENST00000502187 PNPLA6Q8IY17 1366 aa12.02□□□□□ -0.48
LINC01550-202ENST00000502187 ZBED9Q6R2W3 1325 aa12.02□□□□□ -0.49
LINC01550-202ENST00000502187 LTN1O94822 1766 aa12.02□□□□□ -0.49
LINC01550-202ENST00000502187 NUDCQ9Y266 331 aa12.01□□□□□ -0.49
LINC01550-202ENST00000502187 PEAK1Q9H792 1746 aa12.01□□□□□ -0.49
LINC01550-202ENST00000502187 PXDNQ92626 1479 aa12.01□□□□□ -0.49
LINC01550-202ENST00000502187 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
LINC01550-202ENST00000502187 DIAPH1O60610 1272 aaKnown RBP12□□□□□ -0.49
LINC01550-202ENST00000502187 SBNO1A3KN83 1393 aa12□□□□□ -0.49
LINC01550-202ENST00000502187 TNS3Q68CZ2 1445 aa11.99□□□□□ -0.49
LINC01550-202ENST00000502187 SLIT3O75094 1523 aa11.99□□□□□ -0.49
LINC01550-202ENST00000502187 U2SURPO15042 1029 aaKnown RBP11.99□□□□□ -0.49
LINC01550-202ENST00000502187 NFAT5O94916 1531 aa11.99□□□□□ -0.49
LINC01550-202ENST00000502187 ECM2O94769 699 aaPredicted RBP11.98□□□□□ -0.49
LINC01550-202ENST00000502187 U2AF1L5P0DN76 240 aaPredicted RBP11.98□□□□□ -0.49
LINC01550-202ENST00000502187 U2AF1Q01081 240 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC01550-202ENST00000502187 MAP3K19Q56UN5 1328 aa11.98□□□□□ -0.49
LINC01550-202ENST00000502187 FLT4P35916 1363 aa11.98□□□□□ -0.49
LINC01550-202ENST00000502187 CCDC146Q8IYE0 955 aa11.98□□□□□ -0.49
LINC01550-202ENST00000502187 KCNH5Q8NCM2 988 aa11.98□□□□□ -0.49
LINC01550-202ENST00000502187 ROBO1Q9Y6N7 1651 aa11.98□□□□□ -0.49
LINC01550-202ENST00000502187 PHRF1Q9P1Y6 1649 aaKnown RBP11.97□□□□□ -0.49
LINC01550-202ENST00000502187 SENP3-EIF4A1A0A087X0R7 540 aa11.97□□□□□ -0.49
LINC01550-202ENST00000502187 KIF24Q5T7B8 1368 aa11.97□□□□□ -0.49
LINC01550-202ENST00000502187 AMPHP49418 695 aa11.96□□□□□ -0.49
LINC01550-202ENST00000502187 USP19O94966 1318 aa11.96□□□□□ -0.49
LINC01550-202ENST00000502187 ARHGEF10O15013 1369 aa11.96□□□□□ -0.49
LINC01550-202ENST00000502187 CRYBG1Q9Y4K1 1723 aa11.96□□□□□ -0.49
LINC01550-202ENST00000502187 CABLES1Q8TDN4 633 aa11.96□□□□□ -0.5
LINC01550-202ENST00000502187 SOS2Q07890 1332 aaPredicted RBP11.96□□□□□ -0.5
LINC01550-202ENST00000502187 SPATA31A3Q5VYP0 1347 aa11.96□□□□□ -0.5
LINC01550-202ENST00000502187 RTL1A6NKG5 1358 aa11.96□□□□□ -0.5
LINC01550-202ENST00000502187 MED1Q15648 1581 aaPredicted RBP11.95□□□□□ -0.5
LINC01550-202ENST00000502187 ZBTB7CA1YPR0 619 aa11.95□□□□□ -0.5
LINC01550-202ENST00000502187 SPDYE4A6NLX3 237 aa11.95□□□□□ -0.5
LINC01550-202ENST00000502187 IL13P35225 146 aa11.95□□□□□ -0.5
LINC01550-202ENST00000502187 RUNDC1Q96C34 613 aa11.95□□□□□ -0.5
LINC01550-202ENST00000502187 SALL2Q9Y467 1007 aaPredicted RBP11.95□□□□□ -0.5
LINC01550-202ENST00000502187 RGL2O15211 777 aa11.94□□□□□ -0.5
LINC01550-202ENST00000502187 RGPD1P0DJD0 1748 aa11.94□□□□□ -0.5
LINC01550-202ENST00000502187 IQSEC2Q5JU85 1478 aa11.94□□□□□ -0.5
LINC01550-202ENST00000502187 GCP02774 474 aa11.94□□□□□ -0.5
LINC01550-202ENST00000502187 HSP90AB2PQ58FF8 381 aa11.94□□□□□ -0.5
LINC01550-202ENST00000502187 LRRC59Q96AG4 307 aaKnown RBP11.94□□□□□ -0.5
LINC01550-202ENST00000502187 PNNQ9H307 717 aaKnown RBP11.94□□□□□ -0.5
LINC01550-202ENST00000502187 AHDC1Q5TGY3 1603 aaPredicted RBP11.93□□□□□ -0.5
LINC01550-202ENST00000502187 APAF1O14727 1248 aa11.93□□□□□ -0.5
LINC01550-202ENST00000502187 EIF4A2Q14240 407 aaKnown RBP11.93□□□□□ -0.5
LINC01550-202ENST00000502187 HOXC9P31274 260 aa11.93□□□□□ -0.5
LINC01550-202ENST00000502187 MAPK8IP3Q9UPT6 1336 aa11.92□□□□□ -0.5
LINC01550-202ENST00000502187 ABCA3Q99758 1704 aa11.92□□□□□ -0.5
LINC01550-202ENST00000502187 ZC3H6P61129 1189 aaKnown RBP11.92□□□□□ -0.5
LINC01550-202ENST00000502187 NGEFQ8N5V2 710 aa11.92□□□□□ -0.5
LINC01550-202ENST00000502187 FCHSD2O94868 740 aa11.91□□□□□ -0.5
LINC01550-202ENST00000502187 NEFMP07197 916 aa11.91□□□□□ -0.5
LINC01550-202ENST00000502187 HMOX1P09601 288 aa11.91□□□□□ -0.5
LINC01550-202ENST00000502187 PROM2Q8N271 834 aa11.91□□□□□ -0.5
LINC01550-202ENST00000502187 IP6K1Q92551 441 aa11.91□□□□□ -0.5
LINC01550-202ENST00000502187 RGPD5Q99666 1765 aa11.9□□□□□ -0.5
LINC01550-202ENST00000502187 PDE3BQ13370 1112 aa11.9□□□□□ -0.5
LINC01550-202ENST00000502187 ARHGEF25Q86VW2 580 aa11.9□□□□□ -0.5
LINC01550-202ENST00000502187 TCP11L2Q8N4U5 519 aa11.9□□□□□ -0.5
LINC01550-202ENST00000502187 RSPH6AQ9H0K4 717 aa11.9□□□□□ -0.5
LINC01550-202ENST00000502187 PHLPP1O60346 1717 aa11.9□□□□□ -0.51
LINC01550-202ENST00000502187 PRKAR2BP31323 418 aa11.89□□□□□ -0.51
LINC01550-202ENST00000502187 PLEKHF1Q96S99 279 aa11.89□□□□□ -0.51
LINC01550-202ENST00000502187 ABCC6O95255 1503 aa11.89□□□□□ -0.51
LINC01550-202ENST00000502187 RGPD2P0DJD1 1756 aa11.88□□□□□ -0.51
LINC01550-202ENST00000502187 COL18A1P39060 1754 aa11.87□□□□□ -0.51
LINC01550-202ENST00000502187 NEUROD2Q15784 382 aa11.87□□□□□ -0.51
LINC01550-202ENST00000502187 SULT6B1Q6IMI4 303 aa11.87□□□□□ -0.51
LINC01550-202ENST00000502187 LTV1Q96GA3 475 aaPredicted RBP11.87□□□□□ -0.51
LINC01550-202ENST00000502187 RRP7AQ9Y3A4 280 aaKnown RBP11.87□□□□□ -0.51
LINC01550-202ENST00000502187 DLG5Q8TDM6 1919 aa11.87□□□□□ -0.51
LINC01550-202ENST00000502187 ZNF521Q96K83 1311 aa11.87□□□□□ -0.51
LINC01550-202ENST00000502187 IGSF1Q8N6C5 1336 aa11.87□□□□□ -0.51
LINC01550-202ENST00000502187 NUTM2BA6NNL0 878 aaPredicted RBP11.86□□□□□ -0.51
LINC01550-202ENST00000502187 NUTM2EB1AL46 878 aaPredicted RBP11.86□□□□□ -0.51
LINC01550-202ENST00000502187 HSPA1LP34931 641 aa11.86□□□□□ -0.51
LINC01550-202ENST00000502187 CHRNA2Q15822 529 aa11.86□□□□□ -0.51
LINC01550-202ENST00000502187 NUTM2AQ8IVF1 878 aaPredicted RBP11.86□□□□□ -0.51
LINC01550-202ENST00000502187 COL16A1Q07092 1604 aaPredicted RBP11.86□□□□□ -0.51
LINC01550-202ENST00000502187 COL22A1Q8NFW1 1626 aaPredicted RBP11.86□□□□□ -0.51
LINC01550-202ENST00000502187 AEBP1Q8IUX7 1158 aa11.86□□□□□ -0.51
LINC01550-202ENST00000502187 EYA1Q99502 592 aa11.86□□□□□ -0.51
LINC01550-202ENST00000502187 FAM208AQ9UK61 1670 aaKnown RBP11.86□□□□□ -0.51
LINC01550-202ENST00000502187 CPDO75976 1380 aa11.86□□□□□ -0.51
LINC01550-202ENST00000502187 KDRP35968 1356 aa11.86□□□□□ -0.51
LINC01550-202ENST00000502187 TMPOP42166 694 aaKnown RBP11.85□□□□□ -0.51
LINC01550-202ENST00000502187 GOLGA2Q08379 1002 aa11.85□□□□□ -0.51
LINC01550-202ENST00000502187 CCDC27Q2M243 656 aa11.85□□□□□ -0.51
LINC01550-202ENST00000502187 KIAA0232Q92628 1395 aa11.85□□□□□ -0.51
LINC01550-202ENST00000502187 CAMTA1Q9Y6Y1 1673 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms