RNA–Protein interactions for RNA: ENST00000498822.5

PCBP4-218, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,547 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-218ENST00000498822 NUCB1Q02818 461 aa20.12■□□□□ 0.81
PCBP4-218ENST00000498822 MRPL50Q8N5N7 158 aaKnown RBP20.12■□□□□ 0.81
PCBP4-218ENST00000498822 DIP2BQ9P265 1576 aa20.12■□□□□ 0.81
PCBP4-218ENST00000498822 ZMYM3Q14202 1370 aa20.12■□□□□ 0.81
PCBP4-218ENST00000498822 NUDT16Q96DE0 195 aaKnown RBP20.11■□□□□ 0.81
PCBP4-218ENST00000498822 ALDH1L2Q3SY69 923 aa20.11■□□□□ 0.81
PCBP4-218ENST00000498822 ANKRD45Q5TZF3 282 aa20.11■□□□□ 0.81
PCBP4-218ENST00000498822 PNNQ9H307 717 aaKnown RBP20.11■□□□□ 0.81
PCBP4-218ENST00000498822 ZBTB7BO15156 539 aaPredicted RBP20.1■□□□□ 0.81
PCBP4-218ENST00000498822 CHD1LQ86WJ1 897 aa20.1■□□□□ 0.81
PCBP4-218ENST00000498822 SIRT2Q8IXJ6 389 aa20.1■□□□□ 0.81
PCBP4-218ENST00000498822 CPSF1Q10570 1443 aaKnown RBP20.1■□□□□ 0.81
PCBP4-218ENST00000498822 GZF1Q9H116 711 aaPredicted RBP20.09■□□□□ 0.81
PCBP4-218ENST00000498822 SPATA31D1Q6ZQQ2 1576 aa20.08■□□□□ 0.81
PCBP4-218ENST00000498822 PRR36Q9H6K5 1346 aa20.08■□□□□ 0.81
PCBP4-218ENST00000498822 TWISTNBQ3B726 338 aaPredicted RBP20.08■□□□□ 0.81
PCBP4-218ENST00000498822 DLC1Q96QB1 1528 aa20.08■□□□□ 0.8
PCBP4-218ENST00000498822 EDC4Q6P2E9 1401 aaKnown RBP20.08■□□□□ 0.8
PCBP4-218ENST00000498822 ANO8Q9HCE9 1232 aaPredicted RBP20.08■□□□□ 0.8
PCBP4-218ENST00000498822 COG3Q96JB2 828 aa20.07■□□□□ 0.8
PCBP4-218ENST00000498822 CDK12Q9NYV4 1490 aaPredicted RBP20.05■□□□□ 0.8
PCBP4-218ENST00000498822 GNAI1P63096 354 aa20.05■□□□□ 0.8
PCBP4-218ENST00000498822 FOXD4L1Q9NU39 408 aa20.05■□□□□ 0.8
PCBP4-218ENST00000498822 IFT57Q9NWB7 429 aa20.05■□□□□ 0.8
PCBP4-218ENST00000498822 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.05■□□□□ 0.8
PCBP4-218ENST00000498822 ZNF853P0CG23 659 aa20.04■□□□□ 0.8
PCBP4-218ENST00000498822 KNDC1Q76NI1 1749 aa20.04■□□□□ 0.8
PCBP4-218ENST00000498822 PTCH1Q13635 1447 aa20.03■□□□□ 0.8
PCBP4-218ENST00000498822 CD2BP2O95400 341 aaKnown RBP20.03■□□□□ 0.8
PCBP4-218ENST00000498822 MCM10Q7L590 875 aa20.03■□□□□ 0.8
PCBP4-218ENST00000498822 MON2Q7Z3U7 1717 aa20.03■□□□□ 0.8
PCBP4-218ENST00000498822 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
PCBP4-218ENST00000498822 RBM42Q9BTD8 480 aaKnown RBP20.02■□□□□ 0.8
PCBP4-218ENST00000498822 CCDC61Q9Y6R9 512 aa20.02■□□□□ 0.8
PCBP4-218ENST00000498822 SULT6B1Q6IMI4 303 aa20.02■□□□□ 0.79
PCBP4-218ENST00000498822 ABCC4O15439 1325 aa20.01■□□□□ 0.79
PCBP4-218ENST00000498822 CFAP44Q96MT7 982 aa20.01■□□□□ 0.79
PCBP4-218ENST00000498822 ROBO2Q9HCK4 1378 aa20.01■□□□□ 0.79
PCBP4-218ENST00000498822 ITSN1Q15811 1721 aa20■□□□□ 0.79
PCBP4-218ENST00000498822 C3P01024 1663 aa20■□□□□ 0.79
PCBP4-218ENST00000498822 EIF4A2Q14240 407 aaKnown RBP20■□□□□ 0.79
PCBP4-218ENST00000498822 HSCBQ8IWL3 235 aa20■□□□□ 0.79
PCBP4-218ENST00000498822 MIS18AQ9NYP9 233 aa20■□□□□ 0.79
PCBP4-218ENST00000498822 APBB1O00213 710 aa20■□□□□ 0.79
PCBP4-218ENST00000498822 MCM4P33991 863 aa19.99■□□□□ 0.79
PCBP4-218ENST00000498822 TBC1D9Q6ZT07 1266 aa19.99■□□□□ 0.79
PCBP4-218ENST00000498822 AGLP35573 1532 aa19.99■□□□□ 0.79
PCBP4-218ENST00000498822 BRPF1P55201 1214 aaPredicted RBP19.99■□□□□ 0.79
PCBP4-218ENST00000498822 HSP90AB2PQ58FF8 381 aa19.99■□□□□ 0.79
PCBP4-218ENST00000498822 C16orf71Q8IYS4 520 aaPredicted RBP19.99■□□□□ 0.79
PCBP4-218ENST00000498822 AKAP12Q02952 1782 aa19.99■□□□□ 0.79
PCBP4-218ENST00000498822 KIF2CQ99661 725 aa19.98■□□□□ 0.79
PCBP4-218ENST00000498822 ZNF692Q9BU19 519 aaPredicted RBP19.98■□□□□ 0.79
PCBP4-218ENST00000498822 PIK3R4Q99570 1358 aa19.98■□□□□ 0.79
PCBP4-218ENST00000498822 ESF1Q9H501 851 aaKnown RBP19.98■□□□□ 0.79
PCBP4-218ENST00000498822 RIMS1Q86UR5 1692 aaKnown RBP19.98■□□□□ 0.79
PCBP4-218ENST00000498822 BMP2KLQ5H9B9 411 aa19.97■□□□□ 0.79
PCBP4-218ENST00000498822 OTUD7AQ8TE49 926 aaPredicted RBP19.97■□□□□ 0.79
PCBP4-218ENST00000498822 AATKQ6ZMQ8 1374 aa19.97■□□□□ 0.79
PCBP4-218ENST00000498822 CALD1Q05682 793 aaKnown RBP19.96■□□□□ 0.79
PCBP4-218ENST00000498822 FOXO3O43524 673 aa19.96■□□□□ 0.79
PCBP4-218ENST00000498822 GSPT1P15170 499 aaKnown RBP19.96■□□□□ 0.79
PCBP4-218ENST00000498822 RBM25P49756 843 aaKnown RBP19.96■□□□□ 0.79
PCBP4-218ENST00000498822 CHMP5Q9NZZ3 219 aa19.96■□□□□ 0.79
PCBP4-218ENST00000498822 AK9Q5TCS8 1911 aa19.95■□□□□ 0.78
PCBP4-218ENST00000498822 REREQ9P2R6 1566 aa19.95■□□□□ 0.78
PCBP4-218ENST00000498822 ARHGAP45Q92619 1136 aa19.95■□□□□ 0.78
PCBP4-218ENST00000498822 ACEP12821 1306 aa19.95■□□□□ 0.78
PCBP4-218ENST00000498822 ZNF428Q96B54 188 aa19.95■□□□□ 0.78
PCBP4-218ENST00000498822 GCC1Q96CN9 775 aa19.95■□□□□ 0.78
PCBP4-218ENST00000498822 SLC26A8Q96RN1 970 aa19.95■□□□□ 0.78
PCBP4-218ENST00000498822 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.95■□□□□ 0.78
PCBP4-218ENST00000498822 PEAK1Q9H792 1746 aa19.94■□□□□ 0.78
PCBP4-218ENST00000498822 PANK2Q9BZ23 570 aa19.94■□□□□ 0.78
PCBP4-218ENST00000498822 SMARCA5O60264 1052 aaPredicted RBP19.93■□□□□ 0.78
PCBP4-218ENST00000498822 TTC21BQ7Z4L5 1316 aa19.93■□□□□ 0.78
PCBP4-218ENST00000498822 CEBPAP49715 358 aaPredicted RBP19.92■□□□□ 0.78
PCBP4-218ENST00000498822 MSH6P52701 1360 aa19.92■□□□□ 0.78
PCBP4-218ENST00000498822 HSP90AB1P08238 724 aaKnown RBP19.92■□□□□ 0.78
PCBP4-218ENST00000498822 LTKP29376 864 aa19.92■□□□□ 0.78
PCBP4-218ENST00000498822 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.92■□□□□ 0.78
PCBP4-218ENST00000498822 RGS12O14924 1447 aa19.91■□□□□ 0.78
PCBP4-218ENST00000498822 LMOD3Q0VAK6 560 aa19.91■□□□□ 0.78
PCBP4-218ENST00000498822 TRAK2O60296 914 aa19.91■□□□□ 0.78
PCBP4-218ENST00000498822 API5Q9BZZ5 524 aaKnown RBP19.9■□□□□ 0.78
PCBP4-218ENST00000498822 PPP6R1Q9UPN7 881 aa19.9■□□□□ 0.78
PCBP4-218ENST00000498822 NCOA3Q9Y6Q9 1424 aa19.9■□□□□ 0.78
PCBP4-218ENST00000498822 PLEKHM2Q8IWE5 1019 aa19.9■□□□□ 0.78
PCBP4-218ENST00000498822 MEIS3Q99687 375 aa19.9■□□□□ 0.78
PCBP4-218ENST00000498822 NRKQ7Z2Y5 1582 aa19.89■□□□□ 0.77
PCBP4-218ENST00000498822 TNRQ92752 1358 aa19.89■□□□□ 0.77
PCBP4-218ENST00000498822 DDIT3P35638 169 aa19.89■□□□□ 0.77
PCBP4-218ENST00000498822 XRCC6P12956 609 aaKnown RBP eCLIP19.89■□□□□ 0.77
PCBP4-218ENST00000498822 TNPO1Q92973 898 aaKnown RBP19.89■□□□□ 0.77
PCBP4-218ENST00000498822 ADAMTS13Q76LX8 1427 aa19.88■□□□□ 0.77
PCBP4-218ENST00000498822 UBR1Q8IWV7 1749 aa19.88■□□□□ 0.77
PCBP4-218ENST00000498822 F6X3S4 739 aa19.88■□□□□ 0.77
PCBP4-218ENST00000498822 TECPR2O15040 1411 aa19.88■□□□□ 0.77
PCBP4-218ENST00000498822 ATP10DQ9P241 1426 aa19.88■□□□□ 0.77
PCBP4-218ENST00000498822 TMEM2Q9UHN6 1383 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms