RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 NUTM2FA1L443 756 aa7.9□□□□□ -1.14
CSTF1-207ENST00000498689 DCBLD2Q96PD2 775 aa7.9□□□□□ -1.14
CSTF1-207ENST00000498689 TRPM3Q9HCF6 1732 aaPredicted RBP7.89□□□□□ -1.15
CSTF1-207ENST00000498689 ALS2Q96Q42 1657 aa7.89□□□□□ -1.15
CSTF1-207ENST00000498689 PHRF1Q9P1Y6 1649 aaKnown RBP7.89□□□□□ -1.15
CSTF1-207ENST00000498689 RRBP1Q9P2E9 1410 aaKnown RBP7.89□□□□□ -1.15
CSTF1-207ENST00000498689 CCDC85CA6NKD9 419 aa7.89□□□□□ -1.15
CSTF1-207ENST00000498689 TSPY4P0CV99 314 aa7.89□□□□□ -1.15
CSTF1-207ENST00000498689 TSPY10P0CW01 314 aa7.89□□□□□ -1.15
CSTF1-207ENST00000498689 PDE3BQ13370 1112 aa7.89□□□□□ -1.15
CSTF1-207ENST00000498689 COL6A3P12111 3177 aa7.88□□□□□ -1.15
CSTF1-207ENST00000498689 WNK3Q9BYP7 1800 aa7.88□□□□□ -1.15
CSTF1-207ENST00000498689 USP35Q9P2H5 1018 aa7.88□□□□□ -1.15
CSTF1-207ENST00000498689 PKD1L3Q7Z443 1732 aa7.88□□□□□ -1.15
CSTF1-207ENST00000498689 LRRC37A3O60309 1634 aa7.88□□□□□ -1.15
CSTF1-207ENST00000498689 PRAG1Q86YV5 1406 aa7.87□□□□□ -1.15
CSTF1-207ENST00000498689 IFT172Q9UG01 1749 aa7.87□□□□□ -1.15
CSTF1-207ENST00000498689 KRT28Q7Z3Y7 464 aa7.87□□□□□ -1.15
CSTF1-207ENST00000498689 RBM46Q8TBY0 533 aaKnown RBP7.87□□□□□ -1.15
CSTF1-207ENST00000498689 LRPPRCP42704 1394 aaKnown RBP7.86□□□□□ -1.15
CSTF1-207ENST00000498689 E9PCH4 1651 aa7.86□□□□□ -1.15
CSTF1-207ENST00000498689 TXNRD1Q16881 649 aa7.86□□□□□ -1.15
CSTF1-207ENST00000498689 RSPH4AQ5TD94 716 aa7.86□□□□□ -1.15
CSTF1-207ENST00000498689 ZNF579Q8NAF0 562 aaKnown RBP7.86□□□□□ -1.15
CSTF1-207ENST00000498689 PRDM10Q9NQV6 1147 aa7.86□□□□□ -1.15
CSTF1-207ENST00000498689 CCDC144AA2RUR9 1427 aa7.86□□□□□ -1.15
CSTF1-207ENST00000498689 CLCN6P51797 869 aa7.85□□□□□ -1.15
CSTF1-207ENST00000498689 LMOD2Q6P5Q4 547 aa7.85□□□□□ -1.15
CSTF1-207ENST00000498689 KANK1Q14678 1352 aa7.84□□□□□ -1.15
CSTF1-207ENST00000498689 TNRC6CQ9HCJ0 1690 aaKnown RBP7.84□□□□□ -1.15
CSTF1-207ENST00000498689 DLL1O00548 723 aa7.84□□□□□ -1.15
CSTF1-207ENST00000498689 ZNF827Q17R98 1081 aa7.84□□□□□ -1.15
CSTF1-207ENST00000498689 BTAF1O14981 1849 aa7.84□□□□□ -1.15
CSTF1-207ENST00000498689 CICQ96RK0 1608 aaPredicted RBP7.84□□□□□ -1.15
CSTF1-207ENST00000498689 ERBINQ96RT1 1412 aa7.84□□□□□ -1.15
CSTF1-207ENST00000498689 GALR2O43603 387 aaPredicted RBP7.83□□□□□ -1.16
CSTF1-207ENST00000498689 PAK3O75914 559 aaPredicted RBP7.83□□□□□ -1.16
CSTF1-207ENST00000498689 FSTL1Q12841 308 aa7.83□□□□□ -1.16
CSTF1-207ENST00000498689 STRN4Q9NRL3 753 aa7.83□□□□□ -1.16
CSTF1-207ENST00000498689 SBF1O95248 1867 aa7.83□□□□□ -1.16
CSTF1-207ENST00000498689 KIF15Q9NS87 1388 aa7.83□□□□□ -1.16
CSTF1-207ENST00000498689 CASP8AP2Q9UKL3 1982 aa7.82□□□□□ -1.16
CSTF1-207ENST00000498689 ATP7BP35670 1465 aa7.82□□□□□ -1.16
CSTF1-207ENST00000498689 OVOS2A0A0G2JMS6 1433 aa7.82□□□□□ -1.16
CSTF1-207ENST00000498689 OVOS2A0A0J9YW53 1432 aa7.82□□□□□ -1.16
CSTF1-207ENST00000498689 LBX1P52954 281 aa7.82□□□□□ -1.16
CSTF1-207ENST00000498689 OVOS2Q6IE36 1432 aa7.82□□□□□ -1.16
CSTF1-207ENST00000498689 KNDC1Q76NI1 1749 aa7.82□□□□□ -1.16
CSTF1-207ENST00000498689 N4BP2Q86UW6 1770 aaPredicted RBP7.82□□□□□ -1.16
CSTF1-207ENST00000498689 POLD1P28340 1107 aa7.81□□□□□ -1.16
CSTF1-207ENST00000498689 BARGINQ6ZT62 677 aa7.81□□□□□ -1.16
CSTF1-207ENST00000498689 NAIPQ13075 1403 aa7.8□□□□□ -1.16
CSTF1-207ENST00000498689 CEP162Q5TB80 1403 aa7.8□□□□□ -1.16
CSTF1-207ENST00000498689 CHRNA2Q15822 529 aa7.8□□□□□ -1.16
CSTF1-207ENST00000498689 PMFBP1Q8TBY8 1022 aa7.8□□□□□ -1.16
CSTF1-207ENST00000498689 CFAP44Q96MT7 982 aa7.8□□□□□ -1.16
CSTF1-207ENST00000498689 PHF12Q96QT6 1004 aa7.8□□□□□ -1.16
CSTF1-207ENST00000498689 RRP7BPQ9NSQ0 103 aa7.8□□□□□ -1.16
CSTF1-207ENST00000498689 NHSQ6T4R5 1651 aa7.79□□□□□ -1.16
CSTF1-207ENST00000498689 UBTFP17480 764 aaKnown RBP7.79□□□□□ -1.16
CSTF1-207ENST00000498689 C16orf71Q8IYS4 520 aaPredicted RBP7.79□□□□□ -1.16
CSTF1-207ENST00000498689 PIK3C2AO00443 1686 aa7.79□□□□□ -1.16
CSTF1-207ENST00000498689 CCDC88AQ3V6T2 1871 aa7.79□□□□□ -1.16
CSTF1-207ENST00000498689 KCPQ6ZWJ8 1503 aa7.78□□□□□ -1.16
CSTF1-207ENST00000498689 KIAA1551Q9HCM1 1747 aa7.78□□□□□ -1.16
CSTF1-207ENST00000498689 CTCFP49711 727 aaPredicted RBP7.78□□□□□ -1.16
CSTF1-207ENST00000498689 SBNO1A3KN83 1393 aa7.78□□□□□ -1.16
CSTF1-207ENST00000498689 ARHGEF10O15013 1369 aa7.78□□□□□ -1.16
CSTF1-207ENST00000498689 LMO7Q8WWI1 1683 aa7.78□□□□□ -1.16
CSTF1-207ENST00000498689 QRICH2Q9H0J4 1663 aa7.78□□□□□ -1.16
CSTF1-207ENST00000498689 SSH2Q76I76 1423 aa7.78□□□□□ -1.16
CSTF1-207ENST00000498689 BRCA1P38398 1863 aaKnown RBP7.77□□□□□ -1.17
CSTF1-207ENST00000498689 UNC80Q8N2C7 3258 aa7.77□□□□□ -1.17
CSTF1-207ENST00000498689 PRPF38BQ5VTL8 546 aaKnown RBP7.77□□□□□ -1.17
CSTF1-207ENST00000498689 MKRN1Q9UHC7 482 aaKnown RBP7.77□□□□□ -1.17
CSTF1-207ENST00000498689 MKI67P46013 3256 aaKnown RBP7.77□□□□□ -1.17
CSTF1-207ENST00000498689 HFM1A2PYH4 1435 aa7.77□□□□□ -1.17
CSTF1-207ENST00000498689 PNPLA7Q6ZV29 1317 aa7.77□□□□□ -1.17
CSTF1-207ENST00000498689 LARP1Q6PKG0 1096 aaKnown RBP7.76□□□□□ -1.17
CSTF1-207ENST00000498689 PRDM11Q9NQV5 511 aa7.76□□□□□ -1.17
CSTF1-207ENST00000498689 CLTCL1P53675 1640 aa7.76□□□□□ -1.17
CSTF1-207ENST00000498689 NRXN1Q9ULB1 1477 aa7.75□□□□□ -1.17
CSTF1-207ENST00000498689 KIAA0232Q92628 1395 aa7.75□□□□□ -1.17
CSTF1-207ENST00000498689 HSPA8P11142 646 aaKnown RBP7.75□□□□□ -1.17
CSTF1-207ENST00000498689 MPNDQ8N594 471 aa7.75□□□□□ -1.17
CSTF1-207ENST00000498689 PXDNLA1KZ92 1463 aa7.75□□□□□ -1.17
CSTF1-207ENST00000498689 RGPD5Q99666 1765 aa7.74□□□□□ -1.17
CSTF1-207ENST00000498689 PSME1Q06323 249 aa7.74□□□□□ -1.17
CSTF1-207ENST00000498689 TCP11L2Q8N4U5 519 aa7.74□□□□□ -1.17
CSTF1-207ENST00000498689 SLC16A10Q8TF71 515 aa7.74□□□□□ -1.17
CSTF1-207ENST00000498689 RRAGCQ9HB90 399 aa7.74□□□□□ -1.17
CSTF1-207ENST00000498689 LRRC4BQ9NT99 713 aa7.74□□□□□ -1.17
CSTF1-207ENST00000498689 ARFGEF1Q9Y6D6 1849 aa7.73□□□□□ -1.17
CSTF1-207ENST00000498689 ADAMTS7Q9UKP4 1686 aa7.73□□□□□ -1.17
CSTF1-207ENST00000498689 MARCH10Q8NA82 808 aaPredicted RBP7.73□□□□□ -1.17
CSTF1-207ENST00000498689 SMC1BQ8NDV3 1235 aa7.73□□□□□ -1.17
CSTF1-207ENST00000498689 PHF8Q9UPP1 1060 aa7.73□□□□□ -1.17
CSTF1-207ENST00000498689 IGSF1Q8N6C5 1336 aa7.73□□□□□ -1.17
CSTF1-207ENST00000498689 PITPNM2Q9BZ72 1349 aa7.73□□□□□ -1.17
CSTF1-207ENST00000498689 KIF1BO60333 1816 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms