RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 HNRNPMP52272 730 aaKnown RBP eCLIP8.38□□□□□ -1.07
NF1-217ENST00000498569 FAM135AQ9P2D6 1515 aa8.38□□□□□ -1.07
NF1-217ENST00000498569 KIAA1107Q9UPP5 1409 aa8.37□□□□□ -1.07
NF1-217ENST00000498569 PTGDRQ13258 359 aa8.37□□□□□ -1.07
NF1-217ENST00000498569 CCNB3Q8WWL7 1395 aa8.36□□□□□ -1.07
NF1-217ENST00000498569 TIAM1Q13009 1591 aa8.36□□□□□ -1.07
NF1-217ENST00000498569 CFDP1Q9UEE9 299 aaPredicted RBP8.36□□□□□ -1.07
NF1-217ENST00000498569 ADGRG1Q9Y653 693 aa8.36□□□□□ -1.07
NF1-217ENST00000498569 PZPP20742 1482 aa8.36□□□□□ -1.07
NF1-217ENST00000498569 ZC3H13Q5T200 1668 aaKnown RBP8.36□□□□□ -1.07
NF1-217ENST00000498569 ALKQ9UM73 1620 aa8.36□□□□□ -1.07
NF1-217ENST00000498569 TNRQ92752 1358 aa8.35□□□□□ -1.07
NF1-217ENST00000498569 UGGT1Q9NYU2 1555 aa8.35□□□□□ -1.07
NF1-217ENST00000498569 RCCD1A6NED2 376 aa8.35□□□□□ -1.07
NF1-217ENST00000498569 LMOD2Q6P5Q4 547 aa8.35□□□□□ -1.07
NF1-217ENST00000498569 LIAT1Q6ZQX7 453 aa8.35□□□□□ -1.07
NF1-217ENST00000498569 ARHGEF1Q92888 912 aaKnown RBP8.35□□□□□ -1.07
NF1-217ENST00000498569 XIRP1Q702N8 1843 aaKnown RBP8.35□□□□□ -1.07
NF1-217ENST00000498569 TNFRSF10AO00220 468 aa8.34□□□□□ -1.07
NF1-217ENST00000498569 PPEF1O14829 653 aaPredicted RBP8.34□□□□□ -1.07
NF1-217ENST00000498569 GDF9O60383 454 aa8.34□□□□□ -1.07
NF1-217ENST00000498569 SLC6A16Q9GZN6 736 aa8.34□□□□□ -1.07
NF1-217ENST00000498569 NPHP4O75161 1426 aaPredicted RBP8.34□□□□□ -1.07
NF1-217ENST00000498569 CEP152O94986 1710 aa8.34□□□□□ -1.07
NF1-217ENST00000498569 EHBP1L1Q8N3D4 1523 aa8.34□□□□□ -1.08
NF1-217ENST00000498569 NLRP1Q9C000 1473 aa8.33□□□□□ -1.08
NF1-217ENST00000498569 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.33□□□□□ -1.08
NF1-217ENST00000498569 ANKLE2Q86XL3 938 aa8.33□□□□□ -1.08
NF1-217ENST00000498569 UBR1Q8IWV7 1749 aa8.33□□□□□ -1.08
NF1-217ENST00000498569 MTUS2Q5JR59 1369 aa8.33□□□□□ -1.08
NF1-217ENST00000498569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.33□□□□□ -1.08
NF1-217ENST00000498569 MED14O60244 1454 aa8.32□□□□□ -1.08
NF1-217ENST00000498569 SETD1AO15047 1707 aaKnown RBP8.32□□□□□ -1.08
NF1-217ENST00000498569 MLLT3P42568 568 aaPredicted RBP8.32□□□□□ -1.08
NF1-217ENST00000498569 RSPH4AQ5TD94 716 aa8.32□□□□□ -1.08
NF1-217ENST00000498569 RTEL1-TNFRSF6BF6WH68 1400 aa8.31□□□□□ -1.08
NF1-217ENST00000498569 LRRC7Q96NW7 1537 aa8.31□□□□□ -1.08
NF1-217ENST00000498569 AMER1Q5JTC6 1135 aaPredicted RBP8.31□□□□□ -1.08
NF1-217ENST00000498569 THEMISQ8N1K5 641 aaPredicted RBP8.31□□□□□ -1.08
NF1-217ENST00000498569 DHX29Q7Z478 1369 aaKnown RBP8.31□□□□□ -1.08
NF1-217ENST00000498569 CCDC141Q6ZP82 1450 aa8.31□□□□□ -1.08
NF1-217ENST00000498569 EIF2AK4Q9P2K8 1649 aaKnown RBP8.3□□□□□ -1.08
NF1-217ENST00000498569 FBXO31Q5XUX0 539 aaPredicted RBP8.3□□□□□ -1.08
NF1-217ENST00000498569 WASHC2CQ9Y4E1 1318 aa8.29□□□□□ -1.08
NF1-217ENST00000498569 NUTM2FA1L443 756 aa8.29□□□□□ -1.08
NF1-217ENST00000498569 POTECB2RU33 542 aa8.29□□□□□ -1.08
NF1-217ENST00000498569 KIF3BO15066 747 aa8.29□□□□□ -1.08
NF1-217ENST00000498569 AAASQ9NRG9 546 aa8.29□□□□□ -1.08
NF1-217ENST00000498569 CAMSAP2Q08AD1 1489 aa8.29□□□□□ -1.08
NF1-217ENST00000498569 MBD5Q9P267 1494 aa8.29□□□□□ -1.08
NF1-217ENST00000498569 MIA2Q96PC5 1412 aa8.29□□□□□ -1.08
NF1-217ENST00000498569 ROBO1Q9Y6N7 1651 aa8.28□□□□□ -1.08
NF1-217ENST00000498569 ARHGEF5Q12774 1597 aa8.28□□□□□ -1.08
NF1-217ENST00000498569 FCHSD2O94868 740 aa8.28□□□□□ -1.08
NF1-217ENST00000498569 SLC10A3P09131 477 aa8.28□□□□□ -1.08
NF1-217ENST00000498569 TREML4Q6UXN2 200 aa8.28□□□□□ -1.08
NF1-217ENST00000498569 ZNF644Q9H582 1327 aaPredicted RBP8.28□□□□□ -1.08
NF1-217ENST00000498569 ST8SIA5O15466 376 aa8.27□□□□□ -1.09
NF1-217ENST00000498569 OATP04181 439 aa8.27□□□□□ -1.09
NF1-217ENST00000498569 RPIAP49247 311 aa8.27□□□□□ -1.09
NF1-217ENST00000498569 PLA2G2CQ5R387 149 aa8.27□□□□□ -1.09
NF1-217ENST00000498569 CRIPAKQ8N1N5 446 aa8.27□□□□□ -1.09
NF1-217ENST00000498569 SPSB2Q99619 263 aa8.27□□□□□ -1.09
NF1-217ENST00000498569 ABCC3O15438 1527 aa8.27□□□□□ -1.09
NF1-217ENST00000498569 SCUBE3Q8IX30 993 aa8.26□□□□□ -1.09
NF1-217ENST00000498569 PHLPP1O60346 1717 aa8.26□□□□□ -1.09
NF1-217ENST00000498569 ERVK-7P63135 1459 aa8.26□□□□□ -1.09
NF1-217ENST00000498569 SCAF11Q99590 1463 aaKnown RBP8.26□□□□□ -1.09
NF1-217ENST00000498569 FOXC1Q12948 553 aa8.25□□□□□ -1.09
NF1-217ENST00000498569 FAM161AQ3B820 660 aa8.25□□□□□ -1.09
NF1-217ENST00000498569 KCNV2Q8TDN2 545 aa8.25□□□□□ -1.09
NF1-217ENST00000498569 CEP162Q5TB80 1403 aa8.25□□□□□ -1.09
NF1-217ENST00000498569 PIK3C2BO00750 1634 aa8.25□□□□□ -1.09
NF1-217ENST00000498569 MAST1Q9Y2H9 1570 aa8.24□□□□□ -1.09
NF1-217ENST00000498569 PXYLP1Q8TE99 480 aa8.24□□□□□ -1.09
NF1-217ENST00000498569 PKD2L1Q9P0L9 805 aa8.24□□□□□ -1.09
NF1-217ENST00000498569 MROH1Q8NDA8 1641 aa8.24□□□□□ -1.09
NF1-217ENST00000498569 NCOA2Q15596 1464 aa8.24□□□□□ -1.09
NF1-217ENST00000498569 KDM5AP29375 1690 aaKnown RBP8.24□□□□□ -1.09
NF1-217ENST00000498569 CTC1Q2NKJ3 1217 aa8.23□□□□□ -1.09
NF1-217ENST00000498569 CROCC2H7BZ55 1655 aa8.23□□□□□ -1.09
NF1-217ENST00000498569 SLIT1O75093 1534 aa8.23□□□□□ -1.09
NF1-217ENST00000498569 LRRC9Q6ZRR7 1453 aa8.22□□□□□ -1.09
NF1-217ENST00000498569 CD2BP2O95400 341 aaKnown RBP8.22□□□□□ -1.09
NF1-217ENST00000498569 AVPP01185 164 aa8.22□□□□□ -1.09
NF1-217ENST00000498569 PUS10Q3MIT2 529 aaKnown RBP8.22□□□□□ -1.09
NF1-217ENST00000498569 CYP4X1Q8N118 509 aa8.22□□□□□ -1.09
NF1-217ENST00000498569 RGS17Q9UGC6 210 aaPredicted RBP8.22□□□□□ -1.09
NF1-217ENST00000498569 AXIN1O15169 862 aa8.21□□□□□ -1.1
NF1-217ENST00000498569 TSPY4P0CV99 314 aa8.21□□□□□ -1.1
NF1-217ENST00000498569 TSPY10P0CW01 314 aa8.21□□□□□ -1.1
NF1-217ENST00000498569 LCE2AQ5TA79 106 aaPredicted RBP8.21□□□□□ -1.1
NF1-217ENST00000498569 MYO5BQ9ULV0 1848 aa8.21□□□□□ -1.1
NF1-217ENST00000498569 SRCAPQ6ZRS2 3230 aa8.2□□□□□ -1.1
NF1-217ENST00000498569 ARHGAP23Q9P227 1491 aa8.2□□□□□ -1.1
NF1-217ENST00000498569 PRDM15P57071 1507 aaPredicted RBP8.2□□□□□ -1.1
NF1-217ENST00000498569 TOR4AQ9NXH8 423 aa8.2□□□□□ -1.1
NF1-217ENST00000498569 FCF1Q9Y324 198 aaKnown RBP8.2□□□□□ -1.1
NF1-217ENST00000498569 FAM135BQ49AJ0 1406 aa8.2□□□□□ -1.1
NF1-217ENST00000498569 DUOX2Q9NRD8 1548 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms