RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 NUTM2DQ5VT03 806 aaPredicted RBP10.54□□□□□ -0.72
CDC42-205ENST00000498236 GPIHBP1Q8IV16 184 aa10.54□□□□□ -0.72
CDC42-205ENST00000498236 OXER1Q8TDS5 423 aa10.54□□□□□ -0.72
CDC42-205ENST00000498236 UPF1Q92900 1129 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDC42-205ENST00000498236 NRXN3Q9Y4C0 1643 aa10.54□□□□□ -0.72
CDC42-205ENST00000498236 CENPJQ9HC77 1338 aaPredicted RBP10.54□□□□□ -0.72
CDC42-205ENST00000498236 SETD1AO15047 1707 aaKnown RBP10.53□□□□□ -0.72
CDC42-205ENST00000498236 TMEM132EQ6IEE7 984 aa10.53□□□□□ -0.72
CDC42-205ENST00000498236 PUS7Q96PZ0 661 aaKnown RBP10.53□□□□□ -0.72
CDC42-205ENST00000498236 SLC24A3Q9HC58 644 aa10.53□□□□□ -0.72
CDC42-205ENST00000498236 PTPRMP28827 1452 aa10.53□□□□□ -0.72
CDC42-205ENST00000498236 DLC1Q96QB1 1528 aa10.53□□□□□ -0.72
CDC42-205ENST00000498236 ARHGEF28Q8N1W1 1705 aaKnown RBP10.53□□□□□ -0.72
CDC42-205ENST00000498236 PLEKHG1Q9ULL1 1385 aa10.52□□□□□ -0.72
CDC42-205ENST00000498236 YTHDC2Q9H6S0 1430 aaKnown RBP10.52□□□□□ -0.73
CDC42-205ENST00000498236 ANKRD13DQ6ZTN6 518 aa10.52□□□□□ -0.73
CDC42-205ENST00000498236 THEMISQ8N1K5 641 aaPredicted RBP10.52□□□□□ -0.73
CDC42-205ENST00000498236 LRPPRCP42704 1394 aaKnown RBP10.52□□□□□ -0.73
CDC42-205ENST00000498236 BARGINQ6ZT62 677 aa10.51□□□□□ -0.73
CDC42-205ENST00000498236 TRAK1Q9UPV9 953 aa10.51□□□□□ -0.73
CDC42-205ENST00000498236 CEP170BQ9Y4F5 1589 aaPredicted RBP10.51□□□□□ -0.73
CDC42-205ENST00000498236 KTN1Q86UP2 1357 aaKnown RBP10.51□□□□□ -0.73
CDC42-205ENST00000498236 ABCC11Q96J66 1382 aa10.51□□□□□ -0.73
CDC42-205ENST00000498236 ZNF142P52746 1687 aaPredicted RBP10.5□□□□□ -0.73
CDC42-205ENST00000498236 QRICH2Q9H0J4 1663 aa10.5□□□□□ -0.73
CDC42-205ENST00000498236 MED14O60244 1454 aa10.5□□□□□ -0.73
CDC42-205ENST00000498236 TBC1D12O60347 775 aa10.5□□□□□ -0.73
CDC42-205ENST00000498236 SIRT1Q96EB6 747 aa10.5□□□□□ -0.73
CDC42-205ENST00000498236 PRKRIP1Q9H875 184 aaPredicted RBP10.5□□□□□ -0.73
CDC42-205ENST00000498236 TECPR2O15040 1411 aa10.5□□□□□ -0.73
CDC42-205ENST00000498236 SETD1BQ9UPS6 1966 aaKnown RBP10.49□□□□□ -0.73
CDC42-205ENST00000498236 PER1O15534 1290 aaPredicted RBP10.49□□□□□ -0.73
CDC42-205ENST00000498236 EID1Q9Y6B2 187 aa10.49□□□□□ -0.73
CDC42-205ENST00000498236 ADAMTS13Q76LX8 1427 aa10.49□□□□□ -0.73
CDC42-205ENST00000498236 GRXCR2A6NFK2 248 aa10.48□□□□□ -0.73
CDC42-205ENST00000498236 LTKP29376 864 aa10.48□□□□□ -0.73
CDC42-205ENST00000498236 TXNDC2Q86VQ3 553 aa10.48□□□□□ -0.73
CDC42-205ENST00000498236 POLR3GLQ9BT43 218 aa10.48□□□□□ -0.73
CDC42-205ENST00000498236 FAM135BQ49AJ0 1406 aa10.48□□□□□ -0.73
CDC42-205ENST00000498236 DIP2AQ14689 1571 aa10.48□□□□□ -0.73
CDC42-205ENST00000498236 KNDC1Q76NI1 1749 aa10.47□□□□□ -0.73
CDC42-205ENST00000498236 BRPF1P55201 1214 aaPredicted RBP10.47□□□□□ -0.73
CDC42-205ENST00000498236 METP08581 1390 aa10.47□□□□□ -0.73
CDC42-205ENST00000498236 MYOM1P52179 1685 aa10.47□□□□□ -0.73
CDC42-205ENST00000498236 TMEM132AQ24JP5 1023 aa10.46□□□□□ -0.73
CDC42-205ENST00000498236 PTCD2Q8WV60 388 aaKnown RBP10.46□□□□□ -0.73
CDC42-205ENST00000498236 KHSRPQ92945 711 aaKnown RBP eCLIP10.46□□□□□ -0.732e-7■■□□□ 12.6
CDC42-205ENST00000498236 TBX22Q9Y458 520 aa10.46□□□□□ -0.73
CDC42-205ENST00000498236 EVC2Q86UK5 1308 aa10.46□□□□□ -0.73
CDC42-205ENST00000498236 CPS1P31327 1500 aa10.46□□□□□ -0.74
CDC42-205ENST00000498236 TULP4Q9NRJ4 1543 aa10.46□□□□□ -0.74
CDC42-205ENST00000498236 NPC1L1Q9UHC9 1359 aa10.45□□□□□ -0.74
CDC42-205ENST00000498236 NINLQ9Y2I6 1382 aa10.45□□□□□ -0.74
CDC42-205ENST00000498236 SLC34A2O95436 690 aa10.45□□□□□ -0.74
CDC42-205ENST00000498236 LSM11P83369 360 aaKnown RBP eCLIP10.45□□□□□ -0.74
CDC42-205ENST00000498236 RALBP1Q15311 655 aa10.45□□□□□ -0.74
CDC42-205ENST00000498236 PANK3Q9H999 370 aa10.45□□□□□ -0.74
CDC42-205ENST00000498236 EVI5O60447 810 aa10.44□□□□□ -0.74
CDC42-205ENST00000498236 KRI1Q8N9T8 703 aaKnown RBP10.44□□□□□ -0.74
CDC42-205ENST00000498236 PRAM1Q96QH2 718 aa10.44□□□□□ -0.74
CDC42-205ENST00000498236 STK26Q9P289 416 aa10.44□□□□□ -0.74
CDC42-205ENST00000498236 PARD3Q8TEW0 1356 aa10.43□□□□□ -0.74
CDC42-205ENST00000498236 PIK3R4Q99570 1358 aa10.43□□□□□ -0.74
CDC42-205ENST00000498236 PBX2P40425 430 aa10.43□□□□□ -0.74
CDC42-205ENST00000498236 NEUROD2Q15784 382 aa10.43□□□□□ -0.74
CDC42-205ENST00000498236 POGKQ9P215 609 aa10.43□□□□□ -0.74
CDC42-205ENST00000498236 OSBPP22059 807 aa10.42□□□□□ -0.74
CDC42-205ENST00000498236 DDX12PQ92771 950 aa10.42□□□□□ -0.74
CDC42-205ENST00000498236 AK7Q96M32 723 aa10.42□□□□□ -0.74
CDC42-205ENST00000498236 ATAD2Q6PL18 1390 aa10.41□□□□□ -0.74
CDC42-205ENST00000498236 NUTM2FA1L443 756 aa10.41□□□□□ -0.74
CDC42-205ENST00000498236 ANKLE2Q86XL3 938 aa10.41□□□□□ -0.74
CDC42-205ENST00000498236 PTCH1Q13635 1447 aa10.41□□□□□ -0.74
CDC42-205ENST00000498236 MYBBP1AQ9BQG0 1328 aaKnown RBP10.4□□□□□ -0.74
CDC42-205ENST00000498236 CENPBP07199 599 aaPredicted RBP10.4□□□□□ -0.74
CDC42-205ENST00000498236 KNSTRNQ9Y448 316 aa10.4□□□□□ -0.74
CDC42-205ENST00000498236 PTPRUQ92729 1446 aa10.4□□□□□ -0.75
CDC42-205ENST00000498236 PLEKHH1Q9ULM0 1364 aa10.39□□□□□ -0.75
CDC42-205ENST00000498236 ADGRB2O60241 1585 aa10.39□□□□□ -0.75
CDC42-205ENST00000498236 GPR37O15354 613 aa10.39□□□□□ -0.75
CDC42-205ENST00000498236 NUDT7P0C024 238 aa10.39□□□□□ -0.75
CDC42-205ENST00000498236 USP32Q8NFA0 1604 aa10.39□□□□□ -0.75
CDC42-205ENST00000498236 BRD4O60885 1362 aaPredicted RBP10.39□□□□□ -0.75
CDC42-205ENST00000498236 ANKRD36BQ8N2N9 1353 aa10.39□□□□□ -0.75
CDC42-205ENST00000498236 ROBO2Q9HCK4 1378 aa10.39□□□□□ -0.75
CDC42-205ENST00000498236 XRN1Q8IZH2 1706 aaKnown RBP10.38□□□□□ -0.75
CDC42-205ENST00000498236 MINK1Q8N4C8 1332 aaPredicted RBP10.38□□□□□ -0.75
CDC42-205ENST00000498236 SAFB2Q14151 953 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDC42-205ENST00000498236 WAPLQ7Z5K2 1190 aa10.38□□□□□ -0.75
CDC42-205ENST00000498236 SLC26A8Q96RN1 970 aa10.38□□□□□ -0.75
CDC42-205ENST00000498236 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
CDC42-205ENST00000498236 NLRP13Q86W25 1043 aa10.37□□□□□ -0.75
CDC42-205ENST00000498236 CDK19Q9BWU1 502 aa10.37□□□□□ -0.75
CDC42-205ENST00000498236 CARD14Q9BXL6 1004 aa10.37□□□□□ -0.75
CDC42-205ENST00000498236 SLC12A5Q9H2X9 1139 aa10.37□□□□□ -0.75
CDC42-205ENST00000498236 PCDHGA4Q9Y5G9 962 aa10.37□□□□□ -0.75
CDC42-205ENST00000498236 WASLO00401 505 aaPredicted RBP10.36□□□□□ -0.75
CDC42-205ENST00000498236 SRPK2P78362 688 aaKnown RBP10.36□□□□□ -0.75
CDC42-205ENST00000498236 YTHDC1Q96MU7 727 aaKnown RBP10.36□□□□□ -0.75
CDC42-205ENST00000498236 MRS2Q9HD23 443 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms