RNA–Protein interactions for RNA: ENST00000497850.5

NXF3-207, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 2,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-207ENST00000497850 GOLGA6L3A6NEY3 463 aa16.32■□□□□ 0.2
NXF3-207ENST00000497850 PLPPR3Q6T4P5 718 aa16.32■□□□□ 0.2
NXF3-207ENST00000497850 SLKQ9H2G2 1235 aaPredicted RBP16.31■□□□□ 0.2
NXF3-207ENST00000497850 PODXL2Q9NZ53 605 aa16.31■□□□□ 0.2
NXF3-207ENST00000497850 DDX19BQ9UMR2 479 aa16.31■□□□□ 0.2
NXF3-207ENST00000497850 CPSF1Q10570 1443 aaKnown RBP16.31■□□□□ 0.2
NXF3-207ENST00000497850 TSPYL6Q8N831 410 aa16.3■□□□□ 0.2
NXF3-207ENST00000497850 IL13P35225 146 aa16.3■□□□□ 0.2
NXF3-207ENST00000497850 BECN1Q14457 450 aa16.3■□□□□ 0.2
NXF3-207ENST00000497850 NFE2L2Q16236 605 aa16.3■□□□□ 0.2
NXF3-207ENST00000497850 ARXQ96QS3 562 aa16.3■□□□□ 0.2
NXF3-207ENST00000497850 EDC4Q6P2E9 1401 aaKnown RBP16.3■□□□□ 0.2
NXF3-207ENST00000497850 CDC42BPGQ6DT37 1551 aa16.3■□□□□ 0.2
NXF3-207ENST00000497850 FAM83GA6ND36 823 aa16.29■□□□□ 0.2
NXF3-207ENST00000497850 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
NXF3-207ENST00000497850 COG3Q96JB2 828 aa16.29■□□□□ 0.2
NXF3-207ENST00000497850 KIF13AQ9H1H9 1805 aa16.29■□□□□ 0.2
NXF3-207ENST00000497850 PRR36Q9H6K5 1346 aa16.29■□□□□ 0.2
NXF3-207ENST00000497850 DCTN1Q14203 1278 aa16.28■□□□□ 0.2
NXF3-207ENST00000497850 CCDC61Q9Y6R9 512 aa16.28■□□□□ 0.2
NXF3-207ENST00000497850 DLG5Q8TDM6 1919 aa16.27■□□□□ 0.2
NXF3-207ENST00000497850 KIF16BQ96L93 1317 aa16.27■□□□□ 0.2
NXF3-207ENST00000497850 SOX12O15370 315 aa16.27■□□□□ 0.2
NXF3-207ENST00000497850 C1orf115Q9H7X2 142 aa16.27■□□□□ 0.2
NXF3-207ENST00000497850 TNRQ92752 1358 aa16.26■□□□□ 0.19
NXF3-207ENST00000497850 MBIPQ9NS73 344 aa16.26■□□□□ 0.19
NXF3-207ENST00000497850 ZBTB40Q9NUA8 1239 aa16.26■□□□□ 0.19
NXF3-207ENST00000497850 ROBO2Q9HCK4 1378 aa16.26■□□□□ 0.19
NXF3-207ENST00000497850 IPO8O15397 1037 aaKnown RBP16.25■□□□□ 0.19
NXF3-207ENST00000497850 PLEKHG5O94827 1062 aa16.25■□□□□ 0.19
NXF3-207ENST00000497850 ITSN1Q15811 1721 aa16.25■□□□□ 0.19
NXF3-207ENST00000497850 MON2Q7Z3U7 1717 aa16.25■□□□□ 0.19
NXF3-207ENST00000497850 ERBB4Q15303 1308 aa16.25■□□□□ 0.19
NXF3-207ENST00000497850 VAMP4O75379 141 aa16.25■□□□□ 0.19
NXF3-207ENST00000497850 CEBPAP49715 358 aaPredicted RBP16.25■□□□□ 0.19
NXF3-207ENST00000497850 HDAC1Q13547 482 aaPredicted RBP16.25■□□□□ 0.19
NXF3-207ENST00000497850 MFAP1P55081 439 aaKnown RBP16.24■□□□□ 0.19
NXF3-207ENST00000497850 AEBP1Q8IUX7 1158 aa16.24■□□□□ 0.19
NXF3-207ENST00000497850 UPF2Q9HAU5 1272 aaKnown RBP16.24■□□□□ 0.19
NXF3-207ENST00000497850 CDK12Q9NYV4 1490 aaPredicted RBP16.24■□□□□ 0.19
NXF3-207ENST00000497850 ALDH1L2Q3SY69 923 aa16.24■□□□□ 0.19
NXF3-207ENST00000497850 SPRYD3Q8NCJ5 442 aa16.24■□□□□ 0.19
NXF3-207ENST00000497850 AKAP12Q02952 1782 aa16.23■□□□□ 0.19
NXF3-207ENST00000497850 TBC1D32Q96NH3 1257 aa16.23■□□□□ 0.19
NXF3-207ENST00000497850 SLC26A8Q96RN1 970 aa16.23■□□□□ 0.19
NXF3-207ENST00000497850 LNPKQ9C0E8 428 aa16.23■□□□□ 0.19
NXF3-207ENST00000497850 ESPNB1AK53 854 aa16.22■□□□□ 0.19
NXF3-207ENST00000497850 LTKP29376 864 aa16.22■□□□□ 0.19
NXF3-207ENST00000497850 MRPL50Q8N5N7 158 aaKnown RBP16.22■□□□□ 0.19
NXF3-207ENST00000497850 C8orf58Q8NAV2 365 aa16.22■□□□□ 0.19
NXF3-207ENST00000497850 KNDC1Q76NI1 1749 aa16.22■□□□□ 0.19
NXF3-207ENST00000497850 UBR1Q8IWV7 1749 aa16.22■□□□□ 0.19
NXF3-207ENST00000497850 C3P01024 1663 aa16.22■□□□□ 0.19
NXF3-207ENST00000497850 TMEM2Q9UHN6 1383 aa16.22■□□□□ 0.19
NXF3-207ENST00000497850 TPM2P07951 284 aa16.21■□□□□ 0.19
NXF3-207ENST00000497850 MCM4P33991 863 aa16.21■□□□□ 0.19
NXF3-207ENST00000497850 MRE11P49959 708 aa16.21■□□□□ 0.19
NXF3-207ENST00000497850 GNAI1P63096 354 aa16.21■□□□□ 0.19
NXF3-207ENST00000497850 SMC5Q8IY18 1101 aa16.21■□□□□ 0.19
NXF3-207ENST00000497850 HDGFP51858 240 aaKnown RBP16.21■□□□□ 0.19
NXF3-207ENST00000497850 TWISTNBQ3B726 338 aaPredicted RBP16.21■□□□□ 0.19
NXF3-207ENST00000497850 GZF1Q9H116 711 aaPredicted RBP16.21■□□□□ 0.19
NXF3-207ENST00000497850 IFT57Q9NWB7 429 aa16.21■□□□□ 0.19
NXF3-207ENST00000497850 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.21■□□□□ 0.18
NXF3-207ENST00000497850 ACEP12821 1306 aa16.2■□□□□ 0.18
NXF3-207ENST00000497850 AATKQ6ZMQ8 1374 aa16.2■□□□□ 0.18
NXF3-207ENST00000497850 SULT6B1Q6IMI4 303 aa16.2■□□□□ 0.18
NXF3-207ENST00000497850 PDCL3Q9H2J4 239 aa16.2■□□□□ 0.18
NXF3-207ENST00000497850 EIF4A2Q14240 407 aaKnown RBP16.19■□□□□ 0.18
NXF3-207ENST00000497850 KRT24Q2M2I5 525 aa16.19■□□□□ 0.18
NXF3-207ENST00000497850 TBC1D2Q9BYX2 928 aa16.19■□□□□ 0.18
NXF3-207ENST00000497850 TECPR2O15040 1411 aa16.19■□□□□ 0.18
NXF3-207ENST00000497850 ADAMTS13Q76LX8 1427 aa16.19■□□□□ 0.18
NXF3-207ENST00000497850 ZNF853P0CG23 659 aa16.19■□□□□ 0.18
NXF3-207ENST00000497850 TTC21BQ7Z4L5 1316 aa16.18■□□□□ 0.18
NXF3-207ENST00000497850 ZBTB7BO15156 539 aaPredicted RBP16.18■□□□□ 0.18
NXF3-207ENST00000497850 CALD1Q05682 793 aaKnown RBP16.18■□□□□ 0.18
NXF3-207ENST00000497850 ZNF692Q9BU19 519 aaPredicted RBP16.17■□□□□ 0.18
NXF3-207ENST00000497850 HSP90AB2PQ58FF8 381 aa16.17■□□□□ 0.18
NXF3-207ENST00000497850 MCM10Q7L590 875 aa16.17■□□□□ 0.18
NXF3-207ENST00000497850 CFAP44Q96MT7 982 aa16.17■□□□□ 0.18
NXF3-207ENST00000497850 NUCB1Q02818 461 aa16.16■□□□□ 0.18
NXF3-207ENST00000497850 ANKRD45Q5TZF3 282 aa16.16■□□□□ 0.18
NXF3-207ENST00000497850 C22orf23Q9BZE7 217 aa16.16■□□□□ 0.18
NXF3-207ENST00000497850 GRPEL1Q9HAV7 217 aa16.16■□□□□ 0.18
NXF3-207ENST00000497850 CHD1LQ86WJ1 897 aa16.16■□□□□ 0.18
NXF3-207ENST00000497850 PRDM4Q9UKN5 801 aa16.16■□□□□ 0.18
NXF3-207ENST00000497850 TRAK2O60296 914 aa16.15■□□□□ 0.18
NXF3-207ENST00000497850 SIRT1Q96EB6 747 aa16.15■□□□□ 0.18
NXF3-207ENST00000497850 PTCH1Q13635 1447 aa16.15■□□□□ 0.18
NXF3-207ENST00000497850 PTPRUQ92729 1446 aa16.14■□□□□ 0.17
NXF3-207ENST00000497850 BRPF1P55201 1214 aaPredicted RBP16.14■□□□□ 0.17
NXF3-207ENST00000497850 LMOD3Q0VAK6 560 aa16.14■□□□□ 0.17
NXF3-207ENST00000497850 PEAK1Q9H792 1746 aa16.14■□□□□ 0.17
NXF3-207ENST00000497850 SIRT2Q8IXJ6 389 aa16.14■□□□□ 0.17
NXF3-207ENST00000497850 ZNF428Q96B54 188 aa16.14■□□□□ 0.17
NXF3-207ENST00000497850 NRKQ7Z2Y5 1582 aa16.13■□□□□ 0.17
NXF3-207ENST00000497850 ABCC4O15439 1325 aa16.12■□□□□ 0.17
NXF3-207ENST00000497850 MIS18AQ9NYP9 233 aa16.12■□□□□ 0.17
NXF3-207ENST00000497850 ISY1Q9ULR0 285 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms