RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 NUTM2FA1L443 756 aa20.59■□□□□ 0.89
PCBP4-216ENST00000497390 WASLO00401 505 aaPredicted RBP20.59■□□□□ 0.89
PCBP4-216ENST00000497390 KRT24Q2M2I5 525 aa20.59■□□□□ 0.89
PCBP4-216ENST00000497390 CHD1LQ86WJ1 897 aa20.59■□□□□ 0.89
PCBP4-216ENST00000497390 ANKRD45Q5TZF3 282 aa20.58■□□□□ 0.89
PCBP4-216ENST00000497390 NRXN3Q9Y4C0 1643 aa20.58■□□□□ 0.88
PCBP4-216ENST00000497390 ATP7BP35670 1465 aa20.57■□□□□ 0.88
PCBP4-216ENST00000497390 AEBP1Q8IUX7 1158 aa20.57■□□□□ 0.88
PCBP4-216ENST00000497390 GZF1Q9H116 711 aaPredicted RBP20.57■□□□□ 0.88
PCBP4-216ENST00000497390 CPSF1Q10570 1443 aaKnown RBP20.57■□□□□ 0.88
PCBP4-216ENST00000497390 NUDT16Q96DE0 195 aaKnown RBP20.56■□□□□ 0.88
PCBP4-216ENST00000497390 PNNQ9H307 717 aaKnown RBP20.56■□□□□ 0.88
PCBP4-216ENST00000497390 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.55■□□□□ 0.88
PCBP4-216ENST00000497390 ZNF853P0CG23 659 aa20.55■□□□□ 0.88
PCBP4-216ENST00000497390 TWISTNBQ3B726 338 aaPredicted RBP20.54■□□□□ 0.88
PCBP4-216ENST00000497390 PRR36Q9H6K5 1346 aa20.54■□□□□ 0.88
PCBP4-216ENST00000497390 CD2BP2O95400 341 aaKnown RBP20.54■□□□□ 0.88
PCBP4-216ENST00000497390 DLC1Q96QB1 1528 aa20.53■□□□□ 0.88
PCBP4-216ENST00000497390 EDC4Q6P2E9 1401 aaKnown RBP20.52■□□□□ 0.88
PCBP4-216ENST00000497390 ZNF692Q9BU19 519 aaPredicted RBP20.52■□□□□ 0.88
PCBP4-216ENST00000497390 SOX12O15370 315 aa20.52■□□□□ 0.87
PCBP4-216ENST00000497390 RBM42Q9BTD8 480 aaKnown RBP20.52■□□□□ 0.87
PCBP4-216ENST00000497390 IFT57Q9NWB7 429 aa20.52■□□□□ 0.87
PCBP4-216ENST00000497390 SPATA31D1Q6ZQQ2 1576 aa20.52■□□□□ 0.87
PCBP4-216ENST00000497390 PTCH1Q13635 1447 aa20.51■□□□□ 0.87
PCBP4-216ENST00000497390 GNAI1P63096 354 aa20.51■□□□□ 0.87
PCBP4-216ENST00000497390 KNDC1Q76NI1 1749 aa20.51■□□□□ 0.87
PCBP4-216ENST00000497390 DIP2BQ9P265 1576 aa20.51■□□□□ 0.87
PCBP4-216ENST00000497390 MCM4P33991 863 aa20.51■□□□□ 0.87
PCBP4-216ENST00000497390 BRPF1P55201 1214 aaPredicted RBP20.51■□□□□ 0.87
PCBP4-216ENST00000497390 COG3Q96JB2 828 aa20.51■□□□□ 0.87
PCBP4-216ENST00000497390 KIF2CQ99661 725 aa20.51■□□□□ 0.87
PCBP4-216ENST00000497390 FOXD4L1Q9NU39 408 aa20.51■□□□□ 0.87
PCBP4-216ENST00000497390 ABCC4O15439 1325 aa20.5■□□□□ 0.87
PCBP4-216ENST00000497390 CDK12Q9NYV4 1490 aaPredicted RBP20.49■□□□□ 0.87
PCBP4-216ENST00000497390 CFAP44Q96MT7 982 aa20.49■□□□□ 0.87
PCBP4-216ENST00000497390 MCM10Q7L590 875 aa20.48■□□□□ 0.87
PCBP4-216ENST00000497390 CCDC61Q9Y6R9 512 aa20.48■□□□□ 0.87
PCBP4-216ENST00000497390 PIK3R4Q99570 1358 aa20.48■□□□□ 0.87
PCBP4-216ENST00000497390 TBC1D9Q6ZT07 1266 aa20.47■□□□□ 0.87
PCBP4-216ENST00000497390 C16orf71Q8IYS4 520 aaPredicted RBP20.47■□□□□ 0.87
PCBP4-216ENST00000497390 RBM25P49756 843 aaKnown RBP20.47■□□□□ 0.87
PCBP4-216ENST00000497390 SULT6B1Q6IMI4 303 aa20.47■□□□□ 0.87
PCBP4-216ENST00000497390 HSCBQ8IWL3 235 aa20.47■□□□□ 0.87
PCBP4-216ENST00000497390 BMP2KLQ5H9B9 411 aa20.46■□□□□ 0.87
PCBP4-216ENST00000497390 EIF4A2Q14240 407 aaKnown RBP20.46■□□□□ 0.87
PCBP4-216ENST00000497390 CHMP5Q9NZZ3 219 aa20.46■□□□□ 0.87
PCBP4-216ENST00000497390 MON2Q7Z3U7 1717 aa20.46■□□□□ 0.87
PCBP4-216ENST00000497390 PANK2Q9BZ23 570 aa20.45■□□□□ 0.86
PCBP4-216ENST00000497390 MIS18AQ9NYP9 233 aa20.45■□□□□ 0.86
PCBP4-216ENST00000497390 GSPT1P15170 499 aaKnown RBP20.45■□□□□ 0.86
PCBP4-216ENST00000497390 OTUD7AQ8TE49 926 aaPredicted RBP20.45■□□□□ 0.86
PCBP4-216ENST00000497390 ARHGAP45Q92619 1136 aa20.45■□□□□ 0.86
PCBP4-216ENST00000497390 ROBO2Q9HCK4 1378 aa20.44■□□□□ 0.86
PCBP4-216ENST00000497390 C3P01024 1663 aa20.44■□□□□ 0.86
PCBP4-216ENST00000497390 AATKQ6ZMQ8 1374 aa20.44■□□□□ 0.86
PCBP4-216ENST00000497390 HSP90AB2PQ58FF8 381 aa20.44■□□□□ 0.86
PCBP4-216ENST00000497390 ZNF428Q96B54 188 aa20.44■□□□□ 0.86
PCBP4-216ENST00000497390 DDIT3P35638 169 aa20.43■□□□□ 0.86
PCBP4-216ENST00000497390 GCC1Q96CN9 775 aa20.43■□□□□ 0.86
PCBP4-216ENST00000497390 AGLP35573 1532 aa20.43■□□□□ 0.86
PCBP4-216ENST00000497390 APBB1O00213 710 aa20.43■□□□□ 0.86
PCBP4-216ENST00000497390 AKAP12Q02952 1782 aa20.42■□□□□ 0.86
PCBP4-216ENST00000497390 XRCC6P12956 609 aaKnown RBP eCLIP20.42■□□□□ 0.86
PCBP4-216ENST00000497390 AK9Q5TCS8 1911 aa20.41■□□□□ 0.86
PCBP4-216ENST00000497390 NCOA3Q9Y6Q9 1424 aa20.41■□□□□ 0.86
PCBP4-216ENST00000497390 FOXO3O43524 673 aa20.41■□□□□ 0.86
PCBP4-216ENST00000497390 TRAK2O60296 914 aa20.41■□□□□ 0.86
PCBP4-216ENST00000497390 CALD1Q05682 793 aaKnown RBP20.41■□□□□ 0.86
PCBP4-216ENST00000497390 ITSN1Q15811 1721 aa20.4■□□□□ 0.86
PCBP4-216ENST00000497390 SMARCA5O60264 1052 aaPredicted RBP20.39■□□□□ 0.86
PCBP4-216ENST00000497390 ACEP12821 1306 aa20.39■□□□□ 0.86
PCBP4-216ENST00000497390 RGS12O14924 1447 aa20.39■□□□□ 0.86
PCBP4-216ENST00000497390 PLEKHM2Q8IWE5 1019 aa20.39■□□□□ 0.85
PCBP4-216ENST00000497390 RIMS1Q86UR5 1692 aaKnown RBP20.39■□□□□ 0.85
PCBP4-216ENST00000497390 TNPO1Q92973 898 aaKnown RBP20.38■□□□□ 0.85
PCBP4-216ENST00000497390 REREQ9P2R6 1566 aa20.38■□□□□ 0.85
PCBP4-216ENST00000497390 PEAK1Q9H792 1746 aa20.38■□□□□ 0.85
PCBP4-216ENST00000497390 TTC21BQ7Z4L5 1316 aa20.38■□□□□ 0.85
PCBP4-216ENST00000497390 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.38■□□□□ 0.85
PCBP4-216ENST00000497390 HSP90AB1P08238 724 aaKnown RBP20.37■□□□□ 0.85
PCBP4-216ENST00000497390 PLPPR3Q6T4P5 718 aa20.37■□□□□ 0.85
PCBP4-216ENST00000497390 SNX21Q969T3 373 aa20.37■□□□□ 0.85
PCBP4-216ENST00000497390 RRAGDQ9NQL2 400 aaPredicted RBP20.37■□□□□ 0.85
PCBP4-216ENST00000497390 MSH6P52701 1360 aa20.36■□□□□ 0.85
PCBP4-216ENST00000497390 LTKP29376 864 aa20.36■□□□□ 0.85
PCBP4-216ENST00000497390 MEIS3Q99687 375 aa20.36■□□□□ 0.85
PCBP4-216ENST00000497390 API5Q9BZZ5 524 aaKnown RBP20.36■□□□□ 0.85
PCBP4-216ENST00000497390 LMOD3Q0VAK6 560 aa20.36■□□□□ 0.85
PCBP4-216ENST00000497390 SLC26A8Q96RN1 970 aa20.36■□□□□ 0.85
PCBP4-216ENST00000497390 PPP6R1Q9UPN7 881 aa20.36■□□□□ 0.85
PCBP4-216ENST00000497390 ATP10DQ9P241 1426 aa20.36■□□□□ 0.85
PCBP4-216ENST00000497390 FSD2A1L4K1 749 aa20.35■□□□□ 0.85
PCBP4-216ENST00000497390 GAS2L2Q8NHY3 880 aa20.35■□□□□ 0.85
PCBP4-216ENST00000497390 ESF1Q9H501 851 aaKnown RBP20.35■□□□□ 0.85
PCBP4-216ENST00000497390 G2E3Q7L622 706 aa20.34■□□□□ 0.85
PCBP4-216ENST00000497390 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.34■□□□□ 0.85
PCBP4-216ENST00000497390 DCTPP1Q9H773 170 aa20.34■□□□□ 0.85
PCBP4-216ENST00000497390 F6X3S4 739 aa20.34■□□□□ 0.85
PCBP4-216ENST00000497390 CHL1O00533 1208 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms