RNA–Protein interactions for RNA: ENST00000496843.1

PALMD-202, Transcript of palmdelphin, humanhuman

TSL 1 (best)

Gene PALMD, Length 5,294 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-202ENST00000496843 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.42□□□□□ -1.38
PALMD-202ENST00000496843 CCDC94Q9BW85 323 aaPredicted RBP6.42□□□□□ -1.38
PALMD-202ENST00000496843 CWC25Q9NXE8 425 aaPredicted RBP6.42□□□□□ -1.38
PALMD-202ENST00000496843 RAI14Q9P0K7 980 aa6.42□□□□□ -1.38
PALMD-202ENST00000496843 CCDC121Q6ZUS5 278 aa6.42□□□□□ -1.38
PALMD-202ENST00000496843 LCA5Q86VQ0 697 aa6.42□□□□□ -1.38
PALMD-202ENST00000496843 NUTM1Q86Y26 1132 aa6.42□□□□□ -1.38
PALMD-202ENST00000496843 ALS2CR12Q96Q35 445 aa6.42□□□□□ -1.38
PALMD-202ENST00000496843 CCDC113Q9H0I3 377 aa6.42□□□□□ -1.38
PALMD-202ENST00000496843 DESP17661 470 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 CEBPZQ03701 1054 aaKnown RBP6.41□□□□□ -1.38
PALMD-202ENST00000496843 CCDC152Q4G0S7 254 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 KIF18AQ8NI77 898 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 BICDL2A1A5D9 508 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 ZRANB2O95218 330 aaKnown RBP eCLIP6.41□□□□□ -1.38
PALMD-202ENST00000496843 CTAGE9A4FU28 777 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 ATP2C2O75185 946 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 CACNA2D3Q8IZS8 1091 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 CCDC110Q8TBZ0 833 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 GPATCH3Q96I76 525 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 CCDC114Q96M63 670 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 SERPINA10Q9UK55 444 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 MACROD2A1Z1Q3 448 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 TTC36A6NLP5 189 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 POLD1P28340 1107 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 HSP90AB4PQ58FF6 505 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 CPLX2Q6PUV4 134 aaKnown RBP6.41□□□□□ -1.38
PALMD-202ENST00000496843 CCDC148Q8NFR7 591 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 FBXW7Q969H0 707 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 PPP1R12CQ9BZL4 782 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 IFFO1Q0D2I5 559 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 PRIMPOLQ96LW4 560 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 VCX3BQ9H321 246 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 SMC4Q9NTJ3 1288 aa6.41□□□□□ -1.38
PALMD-202ENST00000496843 CGNL1Q0VF96 1302 aa6.4□□□□□ -1.38
PALMD-202ENST00000496843 PTPN14Q15678 1187 aa6.4□□□□□ -1.38
PALMD-202ENST00000496843 IRAK4Q9NWZ3 460 aa6.4□□□□□ -1.38
PALMD-202ENST00000496843 ANAPC4Q9UJX5 808 aa6.4□□□□□ -1.38
PALMD-202ENST00000496843 DYTNA2CJ06 578 aa6.4□□□□□ -1.38
PALMD-202ENST00000496843 LACTBP83111 547 aaPredicted RBP6.4□□□□□ -1.38
PALMD-202ENST00000496843 BIRC2Q13490 618 aa6.4□□□□□ -1.38
PALMD-202ENST00000496843 ARMC9Q7Z3E5 817 aa6.4□□□□□ -1.38
PALMD-202ENST00000496843 TRIM4Q9C037 500 aa6.4□□□□□ -1.38
PALMD-202ENST00000496843 NSRP1Q9H0G5 558 aaKnown RBP6.4□□□□□ -1.38
PALMD-202ENST00000496843 A0A0G2JS52 829 aa6.4□□□□□ -1.39
PALMD-202ENST00000496843 DNAJC8O75937 253 aaPredicted RBP6.4□□□□□ -1.39
PALMD-202ENST00000496843 PIP4K2AP48426 406 aaPredicted RBP6.4□□□□□ -1.39
PALMD-202ENST00000496843 CCDC40Q4G0X9 1142 aa6.4□□□□□ -1.39
PALMD-202ENST00000496843 CCDC38Q502W7 563 aa6.4□□□□□ -1.39
PALMD-202ENST00000496843 FAM177A1Q8N128 213 aaPredicted RBP6.4□□□□□ -1.39
PALMD-202ENST00000496843 SDF4Q9BRK5 362 aa6.4□□□□□ -1.39
PALMD-202ENST00000496843 EPS15P42566 896 aa6.4□□□□□ -1.39
PALMD-202ENST00000496843 PRKG1Q13976 671 aa6.4□□□□□ -1.39
PALMD-202ENST00000496843 FLOT2Q14254 428 aa6.4□□□□□ -1.39
PALMD-202ENST00000496843 TSNAXIP1Q2TAA8 658 aa6.4□□□□□ -1.39
PALMD-202ENST00000496843 CERS3Q8IU89 383 aa6.4□□□□□ -1.39
PALMD-202ENST00000496843 TEX2Q8IWB9 1127 aa6.4□□□□□ -1.39
PALMD-202ENST00000496843 MICAL1Q8TDZ2 1067 aa6.4□□□□□ -1.39
PALMD-202ENST00000496843 RTF1Q92541 710 aaKnown RBP6.4□□□□□ -1.39
PALMD-202ENST00000496843 SRRTQ9BXP5 876 aaKnown RBP6.4□□□□□ -1.39
PALMD-202ENST00000496843 TMX1Q9H3N1 280 aa6.4□□□□□ -1.39
PALMD-202ENST00000496843 UBAP1Q9NZ09 502 aa6.4□□□□□ -1.39
PALMD-202ENST00000496843 PEX19P40855 299 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 PPFIBP1Q86W92 1011 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 GIMAP4Q9NUV9 329 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 FAF1Q9UNN5 650 aaPredicted RBP6.39□□□□□ -1.39
PALMD-202ENST00000496843 CCDC172P0C7W6 258 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 CAPN2P17655 700 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 MVPQ14764 893 aaKnown RBP6.39□□□□□ -1.39
PALMD-202ENST00000496843 CCDC27Q2M243 656 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 SPTY2D1Q68D10 685 aaPredicted RBP6.39□□□□□ -1.39
PALMD-202ENST00000496843 STMN4Q9H169 189 aaPredicted RBP6.39□□□□□ -1.39
PALMD-202ENST00000496843 VPS37CA5D8V6 355 aaPredicted RBP6.39□□□□□ -1.39
PALMD-202ENST00000496843 FERP16591 822 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 ZFXP17010 805 aaPredicted RBP6.39□□□□□ -1.39
PALMD-202ENST00000496843 CA8P35219 290 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 NBPF8Q3BBV2 869 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 SPECC1Q5M775 1068 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 CENPQQ7L2Z9 268 aaPredicted RBP6.39□□□□□ -1.39
PALMD-202ENST00000496843 KLHDC4Q8TBB5 520 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 RMDN2Q96LZ7 410 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 GBP5Q96PP8 586 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 POLE3Q9NRF9 147 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 IKBKGQ9Y6K9 419 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 FRAT2O75474 233 aaPredicted RBP6.39□□□□□ -1.39
PALMD-202ENST00000496843 ERCC3P19447 782 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 ATICP31939 592 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 MAP3K9P80192 1104 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 CDCA8Q53HL2 280 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 VPS53Q5VIR6 699 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 POTEDQ86YR6 584 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 ANKS4BQ8N8V4 417 aa6.39□□□□□ -1.39
PALMD-202ENST00000496843 XAB2Q9HCS7 855 aaKnown RBP6.39□□□□□ -1.39
PALMD-202ENST00000496843 ERC2O15083 957 aa6.38□□□□□ -1.39
PALMD-202ENST00000496843 SERPINI2O75830 405 aa6.38□□□□□ -1.39
PALMD-202ENST00000496843 GJC2Q5T442 439 aaPredicted RBP6.38□□□□□ -1.39
PALMD-202ENST00000496843 CEP112Q8N8E3 955 aa6.38□□□□□ -1.39
PALMD-202ENST00000496843 HIP1RO75146 1068 aa6.38□□□□□ -1.39
PALMD-202ENST00000496843 SMC1BQ8NDV3 1235 aa6.38□□□□□ -1.39
PALMD-202ENST00000496843 FBXO2Q9UK22 296 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms