RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 DDX17Q92841 729 aaKnown RBP32.12■■■□□ 2.73
PPP1R3F-205ENST00000495799 PLEKHF1Q96S99 279 aa32.12■■■□□ 2.73
PPP1R3F-205ENST00000495799 HOXC9P31274 260 aa32.11■■■□□ 2.73
PPP1R3F-205ENST00000495799 SOS2Q07890 1332 aaPredicted RBP32.11■■■□□ 2.73
PPP1R3F-205ENST00000495799 RSPH6AQ9H0K4 717 aa32.1■■■□□ 2.73
PPP1R3F-205ENST00000495799 RGPD1P0DJD0 1748 aa32.1■■■□□ 2.73
PPP1R3F-205ENST00000495799 MED1Q15648 1581 aaPredicted RBP32.1■■■□□ 2.73
PPP1R3F-205ENST00000495799 ZNF521Q96K83 1311 aa32.1■■■□□ 2.73
PPP1R3F-205ENST00000495799 CCDC27Q2M243 656 aa32.08■■■□□ 2.73
PPP1R3F-205ENST00000495799 IP6K1Q92551 441 aa32.07■■■□□ 2.72
PPP1R3F-205ENST00000495799 GOLGA2Q08379 1002 aa32.06■■■□□ 2.72
PPP1R3F-205ENST00000495799 PRKAR2BP31323 418 aa32.05■■■□□ 2.72
PPP1R3F-205ENST00000495799 HMOX1P09601 288 aa32.04■■■□□ 2.72
PPP1R3F-205ENST00000495799 ARHGEF25Q86VW2 580 aa32.04■■■□□ 2.72
PPP1R3F-205ENST00000495799 CRYBG1Q9Y4K1 1723 aa32.03■■■□□ 2.72
PPP1R3F-205ENST00000495799 ROBO1Q9Y6N7 1651 aa32.02■■■□□ 2.72
PPP1R3F-205ENST00000495799 TMPOP42166 694 aaKnown RBP32■■■□□ 2.71
PPP1R3F-205ENST00000495799 NEUROD2Q15784 382 aa32■■■□□ 2.71
PPP1R3F-205ENST00000495799 WWC1Q8IX03 1113 aa32■■■□□ 2.71
PPP1R3F-205ENST00000495799 PHF23Q9BUL5 403 aaPredicted RBP32■■■□□ 2.71
PPP1R3F-205ENST00000495799 RRP7AQ9Y3A4 280 aaKnown RBP32■■■□□ 2.71
PPP1R3F-205ENST00000495799 ABCC6O95255 1503 aa31.99■■■□□ 2.71
PPP1R3F-205ENST00000495799 SULT6B1Q6IMI4 303 aa31.99■■■□□ 2.71
PPP1R3F-205ENST00000495799 IGSF1Q8N6C5 1336 aa31.99■■■□□ 2.71
PPP1R3F-205ENST00000495799 AHDC1Q5TGY3 1603 aaPredicted RBP31.99■■■□□ 2.71
PPP1R3F-205ENST00000495799 WDR63Q8IWG1 891 aa31.98■■■□□ 2.71
PPP1R3F-205ENST00000495799 GTF3C3Q9Y5Q9 886 aa31.98■■■□□ 2.71
PPP1R3F-205ENST00000495799 ZBTB7CA1YPR0 619 aa31.97■■■□□ 2.71
PPP1R3F-205ENST00000495799 E9PSI1 815 aa31.96■■■□□ 2.71
PPP1R3F-205ENST00000495799 CDCA7LQ96GN5 454 aa31.96■■■□□ 2.71
PPP1R3F-205ENST00000495799 KDRP35968 1356 aa31.95■■■□□ 2.7
PPP1R3F-205ENST00000495799 PLEKHG5O94827 1062 aa31.95■■■□□ 2.7
PPP1R3F-205ENST00000495799 NFE2L2Q16236 605 aa31.95■■■□□ 2.7
PPP1R3F-205ENST00000495799 TOM1O60784 492 aa31.94■■■□□ 2.7
PPP1R3F-205ENST00000495799 SLFN5Q08AF3 891 aa31.94■■■□□ 2.7
PPP1R3F-205ENST00000495799 EYA1Q99502 592 aa31.94■■■□□ 2.7
PPP1R3F-205ENST00000495799 RIPK4P57078 832 aa31.93■■■□□ 2.7
PPP1R3F-205ENST00000495799 NEFLP07196 543 aa31.92■■■□□ 2.7
PPP1R3F-205ENST00000495799 CPDO75976 1380 aa31.92■■■□□ 2.7
PPP1R3F-205ENST00000495799 LMOD3Q0VAK6 560 aa31.9■■■□□ 2.7
PPP1R3F-205ENST00000495799 AEBP1Q8IUX7 1158 aa31.9■■■□□ 2.7
PPP1R3F-205ENST00000495799 LTV1Q96GA3 475 aaPredicted RBP31.9■■■□□ 2.7
PPP1R3F-205ENST00000495799 ZC3H6P61129 1189 aaKnown RBP31.9■■■□□ 2.7
PPP1R3F-205ENST00000495799 PHACTR3Q96KR7 559 aa31.89■■■□□ 2.7
PPP1R3F-205ENST00000495799 SUPT16HQ9Y5B9 1047 aaKnown RBP31.89■■■□□ 2.7
PPP1R3F-205ENST00000495799 ABCA3Q99758 1704 aa31.89■■■□□ 2.7
PPP1R3F-205ENST00000495799 DUSP27Q5VZP5 1158 aa31.88■■■□□ 2.69
PPP1R3F-205ENST00000495799 TRMT2AQ8IZ69 625 aaKnown RBP31.88■■■□□ 2.69
PPP1R3F-205ENST00000495799 LRRC59Q96AG4 307 aaKnown RBP31.88■■■□□ 2.69
PPP1R3F-205ENST00000495799 CABLES1Q8TDN4 633 aa31.87■■■□□ 2.69
PPP1R3F-205ENST00000495799 HAP1P54257 671 aaPredicted RBP31.86■■■□□ 2.69
PPP1R3F-205ENST00000495799 TRIM35Q9UPQ4 493 aa31.86■■■□□ 2.69
PPP1R3F-205ENST00000495799 COL18A1P39060 1754 aa31.85■■■□□ 2.69
PPP1R3F-205ENST00000495799 IL16Q14005 1332 aa31.85■■■□□ 2.69
PPP1R3F-205ENST00000495799 CALD1Q05682 793 aaKnown RBP31.85■■■□□ 2.69
PPP1R3F-205ENST00000495799 FAM208AQ9UK61 1670 aaKnown RBP31.84■■■□□ 2.69
PPP1R3F-205ENST00000495799 ANKRD24Q8TF21 1146 aa31.84■■■□□ 2.69
PPP1R3F-205ENST00000495799 DLG5Q8TDM6 1919 aa31.84■■■□□ 2.69
PPP1R3F-205ENST00000495799 CAMTA1Q9Y6Y1 1673 aa31.83■■■□□ 2.69
PPP1R3F-205ENST00000495799 RGPD5Q99666 1765 aa31.83■■■□□ 2.69
PPP1R3F-205ENST00000495799 MYH16Q9H6N6 1097 aa31.83■■■□□ 2.69
PPP1R3F-205ENST00000495799 KIAA0232Q92628 1395 aa31.82■■■□□ 2.68
PPP1R3F-205ENST00000495799 PHLPP1O60346 1717 aa31.81■■■□□ 2.68
PPP1R3F-205ENST00000495799 RCAN3Q9UKA8 241 aa31.81■■■□□ 2.68
PPP1R3F-205ENST00000495799 NCAPD2Q15021 1401 aa31.8■■■□□ 2.68
PPP1R3F-205ENST00000495799 COL22A1Q8NFW1 1626 aaPredicted RBP31.8■■■□□ 2.68
PPP1R3F-205ENST00000495799 GAS2L2Q8NHY3 880 aa31.8■■■□□ 2.68
PPP1R3F-205ENST00000495799 RGPD2P0DJD1 1756 aa31.79■■■□□ 2.68
PPP1R3F-205ENST00000495799 SPINK5Q9NQ38 1064 aaPredicted RBP31.79■■■□□ 2.68
PPP1R3F-205ENST00000495799 ERBB3P21860 1342 aa31.79■■■□□ 2.68
PPP1R3F-205ENST00000495799 AXIN2Q9Y2T1 843 aa31.78■■■□□ 2.68
PPP1R3F-205ENST00000495799 NBPF6Q5VWK0 638 aa31.77■■■□□ 2.68
PPP1R3F-205ENST00000495799 NBPF4Q96M43 638 aa31.77■■■□□ 2.68
PPP1R3F-205ENST00000495799 PRDM11Q9NQV5 511 aa31.76■■■□□ 2.68
PPP1R3F-205ENST00000495799 LMO7Q8WWI1 1683 aa31.75■■■□□ 2.67
PPP1R3F-205ENST00000495799 UBAP1LF5GYI3 381 aa31.75■■■□□ 2.67
PPP1R3F-205ENST00000495799 COL16A1Q07092 1604 aaPredicted RBP31.74■■■□□ 2.67
PPP1R3F-205ENST00000495799 RNF123Q5XPI4 1314 aa31.73■■■□□ 2.67
PPP1R3F-205ENST00000495799 CHRNA2Q15822 529 aa31.72■■■□□ 2.67
PPP1R3F-205ENST00000495799 USHBP1Q8N6Y0 703 aa31.72■■■□□ 2.67
PPP1R3F-205ENST00000495799 PIP4K2BP78356 416 aa31.7■■■□□ 2.67
PPP1R3F-205ENST00000495799 MTHFSDQ2M296 383 aaKnown RBP31.7■■■□□ 2.67
PPP1R3F-205ENST00000495799 CSB-PGBD3P0DP91 1061 aa31.7■■■□□ 2.66
PPP1R3F-205ENST00000495799 HTATSF1O43719 755 aaKnown RBP31.69■■■□□ 2.66
PPP1R3F-205ENST00000495799 FKBP8Q14318 412 aa31.69■■■□□ 2.66
PPP1R3F-205ENST00000495799 RTF1Q92541 710 aaKnown RBP31.68■■■□□ 2.66
PPP1R3F-205ENST00000495799 PLEKHG2Q9H7P9 1386 aa31.68■■■□□ 2.66
PPP1R3F-205ENST00000495799 GNAI1P63096 354 aa31.67■■■□□ 2.66
PPP1R3F-205ENST00000495799 CERKQ8TCT0 537 aa31.67■■■□□ 2.66
PPP1R3F-205ENST00000495799 IFT57Q9NWB7 429 aa31.67■■■□□ 2.66
PPP1R3F-205ENST00000495799 AMOTQ4VCS5 1084 aa31.66■■■□□ 2.66
PPP1R3F-205ENST00000495799 FANCIQ9NVI1 1328 aa31.66■■■□□ 2.66
PPP1R3F-205ENST00000495799 CT47B1P0C2W7 299 aaPredicted RBP31.65■■■□□ 2.66
PPP1R3F-205ENST00000495799 NLRP2Q9NX02 1062 aa31.65■■■□□ 2.66
PPP1R3F-205ENST00000495799 PLEKHO1Q53GL0 409 aaPredicted RBP31.65■■■□□ 2.66
PPP1R3F-205ENST00000495799 COL14A1Q05707 1796 aaKnown RBP31.63■■■□□ 2.65
PPP1R3F-205ENST00000495799 MAP3K5Q99683 1374 aa31.63■■■□□ 2.65
PPP1R3F-205ENST00000495799 RRP1P56182 461 aaKnown RBP31.63■■■□□ 2.65
PPP1R3F-205ENST00000495799 ERICH6BQ5W0A0 696 aa31.63■■■□□ 2.65
PPP1R3F-205ENST00000495799 GNAT3A8MTJ3 354 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms