RNA–Protein interactions for RNA: ENST00000495794.5

BRD9-213, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 4,865 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-213ENST00000495794 SIL1Q9H173 461 aa16.69■□□□□ 0.26
BRD9-213ENST00000495794 CYP46A1Q9Y6A2 500 aa16.69■□□□□ 0.26
BRD9-213ENST00000495794 A0A0U1RQG5 324 aaPredicted RBP16.69■□□□□ 0.26
BRD9-213ENST00000495794 RBM33Q96EV2 1170 aaKnown RBP16.69■□□□□ 0.26
BRD9-213ENST00000495794 ABCC11Q96J66 1382 aa16.69■□□□□ 0.26
BRD9-213ENST00000495794 TRIM34Q9BYJ4 488 aa16.68■□□□□ 0.26
BRD9-213ENST00000495794 STRN4Q9NRL3 753 aa16.68■□□□□ 0.26
BRD9-213ENST00000495794 IFT57Q9NWB7 429 aa16.68■□□□□ 0.26
BRD9-213ENST00000495794 CFAP43Q8NDM7 1665 aa16.68■□□□□ 0.26
BRD9-213ENST00000495794 IL1RAPL2Q9NP60 686 aa16.68■□□□□ 0.26
BRD9-213ENST00000495794 BRPF3Q9ULD4 1205 aa16.68■□□□□ 0.26
BRD9-213ENST00000495794 FAM177BA6PVY3 158 aa16.68■□□□□ 0.26
BRD9-213ENST00000495794 DUSP27Q5VZP5 1158 aa16.68■□□□□ 0.26
BRD9-213ENST00000495794 PCMTD1Q96MG8 357 aaPredicted RBP16.68■□□□□ 0.26
BRD9-213ENST00000495794 CABP4P57796 275 aa16.68■□□□□ 0.26
BRD9-213ENST00000495794 PDE4CQ08493 712 aa16.68■□□□□ 0.26
BRD9-213ENST00000495794 ADGRL1O94910 1474 aa16.67■□□□□ 0.26
BRD9-213ENST00000495794 NKTRP30414 1462 aaKnown RBP16.67■□□□□ 0.26
BRD9-213ENST00000495794 SKAP1Q86WV1 359 aa16.67■□□□□ 0.26
BRD9-213ENST00000495794 CCDC39Q9UFE4 941 aa16.67■□□□□ 0.26
BRD9-213ENST00000495794 LETM1O95202 739 aaPredicted RBP16.67■□□□□ 0.26
BRD9-213ENST00000495794 DCTN1Q14203 1278 aa16.67■□□□□ 0.26
BRD9-213ENST00000495794 KIF6Q6ZMV9 814 aa16.67■□□□□ 0.26
BRD9-213ENST00000495794 NAT10Q9H0A0 1025 aaKnown RBP16.67■□□□□ 0.26
BRD9-213ENST00000495794 CIZ1Q9ULV3 898 aaPredicted RBP16.67■□□□□ 0.26
BRD9-213ENST00000495794 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
BRD9-213ENST00000495794 SART3Q15020 963 aaKnown RBP16.67■□□□□ 0.26
BRD9-213ENST00000495794 ALDH1L2Q3SY69 923 aa16.67■□□□□ 0.26
BRD9-213ENST00000495794 MCM10Q7L590 875 aa16.67■□□□□ 0.26
BRD9-213ENST00000495794 FYB1O15117 783 aa16.66■□□□□ 0.26
BRD9-213ENST00000495794 KINO60870 393 aaKnown RBP16.66■□□□□ 0.26
BRD9-213ENST00000495794 MYL6BP14649 208 aa16.66■□□□□ 0.26
BRD9-213ENST00000495794 MIS18AQ9NYP9 233 aa16.66■□□□□ 0.26
BRD9-213ENST00000495794 EXOC6BQ9Y2D4 811 aa16.66■□□□□ 0.26
BRD9-213ENST00000495794 MCM4P33991 863 aa16.66■□□□□ 0.26
BRD9-213ENST00000495794 NME9Q86XW9 330 aa16.66■□□□□ 0.26
BRD9-213ENST00000495794 GNAT3A8MTJ3 354 aa16.65■□□□□ 0.26
BRD9-213ENST00000495794 XBP1P17861 261 aa16.65■□□□□ 0.26
BRD9-213ENST00000495794 CCDC158Q5M9N0 1113 aa16.65■□□□□ 0.26
BRD9-213ENST00000495794 GPATCH8Q9UKJ3 1502 aaKnown RBP16.65■□□□□ 0.26
BRD9-213ENST00000495794 WDR33Q9C0J8 1336 aaKnown RBP16.65■□□□□ 0.26
BRD9-213ENST00000495794 TOM1L2Q6ZVM7 507 aa16.65■□□□□ 0.26
BRD9-213ENST00000495794 BTBD11A6QL63 1104 aa16.65■□□□□ 0.26
BRD9-213ENST00000495794 MAP4K4O95819 1239 aaPredicted RBP16.65■□□□□ 0.26
BRD9-213ENST00000495794 RAPGEF6Q8TEU7 1601 aa16.65■□□□□ 0.26
BRD9-213ENST00000495794 DDX54Q8TDD1 881 aaKnown RBP16.64■□□□□ 0.26
BRD9-213ENST00000495794 TRIM5Q9C035 493 aa16.64■□□□□ 0.26
BRD9-213ENST00000495794 EMILIN1Q9Y6C2 1016 aa16.64■□□□□ 0.26
BRD9-213ENST00000495794 SCAF11Q99590 1463 aaKnown RBP16.64■□□□□ 0.25
BRD9-213ENST00000495794 TSPY26PQ9H489 355 aa16.64■□□□□ 0.25
BRD9-213ENST00000495794 AACSQ86V21 672 aa16.64■□□□□ 0.25
BRD9-213ENST00000495794 ANKRD1Q15327 319 aa16.64■□□□□ 0.25
BRD9-213ENST00000495794 CNNM1Q9NRU3 951 aa16.64■□□□□ 0.25
BRD9-213ENST00000495794 LRPPRCP42704 1394 aaKnown RBP16.63■□□□□ 0.25
BRD9-213ENST00000495794 ATP2B1P20020 1258 aa16.63■□□□□ 0.25
BRD9-213ENST00000495794 CCDC70Q6NSX1 233 aa16.63■□□□□ 0.25
BRD9-213ENST00000495794 BRMS1Q9HCU9 246 aa16.63■□□□□ 0.25
BRD9-213ENST00000495794 GPS2Q13227 327 aa16.63■□□□□ 0.25
BRD9-213ENST00000495794 PRDM11Q9NQV5 511 aa16.63■□□□□ 0.25
BRD9-213ENST00000495794 FBXO31Q5XUX0 539 aaPredicted RBP16.63■□□□□ 0.25
BRD9-213ENST00000495794 OLFM4Q6UX06 510 aa16.62■□□□□ 0.25
BRD9-213ENST00000495794 NUP153P49790 1475 aaKnown RBP16.62■□□□□ 0.25
BRD9-213ENST00000495794 DISP3Q9P2K9 1392 aa16.62■□□□□ 0.25
BRD9-213ENST00000495794 C14orf93Q9H972 538 aaKnown RBP16.62■□□□□ 0.25
BRD9-213ENST00000495794 XPCQ01831 940 aaPredicted RBP16.62■□□□□ 0.25
BRD9-213ENST00000495794 BLOC1S2Q6QNY1 142 aa16.62■□□□□ 0.25
BRD9-213ENST00000495794 R3HCC1Q9Y3T6 440 aaKnown RBP16.62■□□□□ 0.25
BRD9-213ENST00000495794 AEBP1Q8IUX7 1158 aa16.62■□□□□ 0.25
BRD9-213ENST00000495794 POGZQ7Z3K3 1410 aa16.61■□□□□ 0.25
BRD9-213ENST00000495794 ZC3H6P61129 1189 aaKnown RBP16.61■□□□□ 0.25
BRD9-213ENST00000495794 KDM4AO75164 1064 aa16.61■□□□□ 0.25
BRD9-213ENST00000495794 TTC39AQ5SRH9 613 aa16.61■□□□□ 0.25
BRD9-213ENST00000495794 CWC27Q6UX04 472 aaKnown RBP16.61■□□□□ 0.25
BRD9-213ENST00000495794 KCNH5Q8NCM2 988 aa16.61■□□□□ 0.25
BRD9-213ENST00000495794 WASLO00401 505 aaPredicted RBP16.61■□□□□ 0.25
BRD9-213ENST00000495794 CEBPZQ03701 1054 aaKnown RBP16.61■□□□□ 0.25
BRD9-213ENST00000495794 STK3Q13188 491 aa16.61■□□□□ 0.25
BRD9-213ENST00000495794 STK38Q15208 465 aa16.61■□□□□ 0.25
BRD9-213ENST00000495794 LARP1BQ659C4 914 aaKnown RBP16.61■□□□□ 0.25
BRD9-213ENST00000495794 ZNF396Q96N95 335 aaPredicted RBP16.61■□□□□ 0.25
BRD9-213ENST00000495794 CCDC173Q0VFZ6 552 aa16.6■□□□□ 0.25
BRD9-213ENST00000495794 TRIM27P14373 513 aa16.6■□□□□ 0.25
BRD9-213ENST00000495794 KRT85P78386 507 aa16.6■□□□□ 0.25
BRD9-213ENST00000495794 RRP12Q5JTH9 1297 aaKnown RBP16.6■□□□□ 0.25
BRD9-213ENST00000495794 FMNL2Q96PY5 1086 aa16.6■□□□□ 0.25
BRD9-213ENST00000495794 NOS1P29475 1434 aa16.6■□□□□ 0.25
BRD9-213ENST00000495794 CCDC57Q2TAC2 916 aa16.6■□□□□ 0.25
BRD9-213ENST00000495794 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.6■□□□□ 0.253e-7■■□□□ 12.8
BRD9-213ENST00000495794 CEP126Q9P2H0 1117 aa16.59■□□□□ 0.25
BRD9-213ENST00000495794 TCEAL9Q9UHQ7 104 aa16.59■□□□□ 0.25
BRD9-213ENST00000495794 MEX3CQ5U5Q3 659 aaKnown RBP16.59■□□□□ 0.25
BRD9-213ENST00000495794 KIF1BPQ96EK5 621 aa16.59■□□□□ 0.25
BRD9-213ENST00000495794 JAKMIP1Q96N16 626 aaKnown RBP16.58■□□□□ 0.25
BRD9-213ENST00000495794 GRPEL1Q9HAV7 217 aa16.58■□□□□ 0.25
BRD9-213ENST00000495794 MTMR7Q9Y216 660 aa16.58■□□□□ 0.25
BRD9-213ENST00000495794 ADAMTS12P58397 1594 aa16.58■□□□□ 0.25
BRD9-213ENST00000495794 TAF7Q15545 349 aaPredicted RBP16.58■□□□□ 0.24
BRD9-213ENST00000495794 MNS1Q8NEH6 495 aa16.58■□□□□ 0.24
BRD9-213ENST00000495794 NUTM1Q86Y26 1132 aa16.58■□□□□ 0.24
BRD9-213ENST00000495794 CTDP1Q9Y5B0 961 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms