RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 PTGER2P43116 358 aa19.6■□□□□ 0.73
COL1A1-209ENST00000495677 USP6P35125 1406 aa19.59■□□□□ 0.73
COL1A1-209ENST00000495677 WDR17Q8IZU2 1322 aa19.59■□□□□ 0.73
COL1A1-209ENST00000495677 NLRP6P59044 892 aa19.59■□□□□ 0.73
COL1A1-209ENST00000495677 TOM1L2Q6ZVM7 507 aa19.59■□□□□ 0.73
COL1A1-209ENST00000495677 MARCH10Q8NA82 808 aaPredicted RBP19.59■□□□□ 0.73
COL1A1-209ENST00000495677 SRPK2P78362 688 aaKnown RBP19.58■□□□□ 0.72
COL1A1-209ENST00000495677 PTF1AQ7RTS3 328 aa19.58■□□□□ 0.72
COL1A1-209ENST00000495677 PDGFDQ9GZP0 370 aaPredicted RBP19.58■□□□□ 0.72
COL1A1-209ENST00000495677 UTRNP46939 3433 aa19.57■□□□□ 0.72
COL1A1-209ENST00000495677 PIK3C2AO00443 1686 aa19.57■□□□□ 0.72
COL1A1-209ENST00000495677 ZNF784Q8NCA9 323 aaPredicted RBP19.57■□□□□ 0.72
COL1A1-209ENST00000495677 QRICH2Q9H0J4 1663 aa19.56■□□□□ 0.72
COL1A1-209ENST00000495677 AXIN2Q9Y2T1 843 aa19.56■□□□□ 0.72
COL1A1-209ENST00000495677 KAT6BQ8WYB5 2073 aa19.56■□□□□ 0.72
COL1A1-209ENST00000495677 CENPJQ9HC77 1338 aaPredicted RBP19.55■□□□□ 0.72
COL1A1-209ENST00000495677 ZBTB7AO95365 584 aa19.55■□□□□ 0.72
COL1A1-209ENST00000495677 SLC15A2Q16348 729 aa19.55■□□□□ 0.72
COL1A1-209ENST00000495677 TXNRD1Q16881 649 aa19.55■□□□□ 0.72
COL1A1-209ENST00000495677 NBPF1Q3BBV0 1214 aa19.55■□□□□ 0.72
COL1A1-209ENST00000495677 SYT17Q9BSW7 474 aa19.55■□□□□ 0.72
COL1A1-209ENST00000495677 CARD10Q9BWT7 1032 aa19.55■□□□□ 0.72
COL1A1-209ENST00000495677 CABP2Q9NPB3 220 aa19.55■□□□□ 0.72
COL1A1-209ENST00000495677 CABP1Q9NZU7 370 aa19.55■□□□□ 0.72
COL1A1-209ENST00000495677 SGIP1Q9BQI5 828 aa19.54■□□□□ 0.72
COL1A1-209ENST00000495677 ARHGEF25Q86VW2 580 aa19.53■□□□□ 0.72
COL1A1-209ENST00000495677 MTFR1LQ9H019 292 aa19.53■□□□□ 0.72
COL1A1-209ENST00000495677 STK32BQ9NY57 414 aa19.53■□□□□ 0.72
COL1A1-209ENST00000495677 EXOC5O00471 708 aa19.52■□□□□ 0.72
COL1A1-209ENST00000495677 KCNH5Q8NCM2 988 aa19.52■□□□□ 0.72
COL1A1-209ENST00000495677 ATF5Q9Y2D1 282 aaPredicted RBP19.52■□□□□ 0.72
COL1A1-209ENST00000495677 CPSF1Q10570 1443 aaKnown RBP19.51■□□□□ 0.71
COL1A1-209ENST00000495677 ZNF692Q9BU19 519 aaPredicted RBP19.51■□□□□ 0.71
COL1A1-209ENST00000495677 FHDC1Q9C0D6 1143 aaPredicted RBP19.51■□□□□ 0.71
COL1A1-209ENST00000495677 NHSQ6T4R5 1651 aa19.51■□□□□ 0.71
COL1A1-209ENST00000495677 TRPM1Q7Z4N2 1603 aa19.51■□□□□ 0.71
COL1A1-209ENST00000495677 ZBTB7CA1YPR0 619 aa19.5■□□□□ 0.71
COL1A1-209ENST00000495677 ABCC6O95255 1503 aa19.5■□□□□ 0.71
COL1A1-209ENST00000495677 CCDC7Q96M83 1385 aa19.48■□□□□ 0.71
COL1A1-209ENST00000495677 MAP3K5Q99683 1374 aa19.48■□□□□ 0.71
COL1A1-209ENST00000495677 COL24A1Q17RW2 1714 aa19.48■□□□□ 0.71
COL1A1-209ENST00000495677 QSER1Q2KHR3 1735 aa19.48■□□□□ 0.71
COL1A1-209ENST00000495677 PAPPAQ13219 1627 aa19.47■□□□□ 0.71
COL1A1-209ENST00000495677 TTC21BQ7Z4L5 1316 aa19.46■□□□□ 0.71
COL1A1-209ENST00000495677 TTC21AQ8NDW8 1320 aa19.46■□□□□ 0.71
COL1A1-209ENST00000495677 BTAF1O14981 1849 aa19.46■□□□□ 0.71
COL1A1-209ENST00000495677 TNS2Q63HR2 1409 aa19.45■□□□□ 0.7
COL1A1-209ENST00000495677 C1QTNF8P60827 252 aa19.45■□□□□ 0.7
COL1A1-209ENST00000495677 EVC2Q86UK5 1308 aa19.45■□□□□ 0.7
COL1A1-209ENST00000495677 NFAT5O94916 1531 aa19.45■□□□□ 0.7
COL1A1-209ENST00000495677 ARXQ96QS3 562 aa19.44■□□□□ 0.7
COL1A1-209ENST00000495677 CSB-PGBD3P0DP91 1061 aa19.43■□□□□ 0.7
COL1A1-209ENST00000495677 USP54Q70EL1 1684 aa19.43■□□□□ 0.7
COL1A1-209ENST00000495677 MON2Q7Z3U7 1717 aa19.41■□□□□ 0.7
COL1A1-209ENST00000495677 LTN1O94822 1766 aa19.4■□□□□ 0.7
COL1A1-209ENST00000495677 SLC16A10Q8TF71 515 aa19.4■□□□□ 0.7
COL1A1-209ENST00000495677 SENP3-EIF4A1A0A087X0R7 540 aa19.39■□□□□ 0.69
COL1A1-209ENST00000495677 USP31Q70CQ4 1352 aa19.37■□□□□ 0.69
COL1A1-209ENST00000495677 ERBB3P21860 1342 aa19.36■□□□□ 0.69
COL1A1-209ENST00000495677 ACSBG1Q96GR2 724 aa19.36■□□□□ 0.69
COL1A1-209ENST00000495677 IL2RBP14784 551 aa19.35■□□□□ 0.69
COL1A1-209ENST00000495677 TUBGCP6Q96RT7 1819 aa19.35■□□□□ 0.69
COL1A1-209ENST00000495677 KTN1Q86UP2 1357 aaKnown RBP19.34■□□□□ 0.69
COL1A1-209ENST00000495677 SOX12O15370 315 aa19.34■□□□□ 0.69
COL1A1-209ENST00000495677 AKT1S1Q96B36 256 aa19.34■□□□□ 0.69
COL1A1-209ENST00000495677 LRRC4BQ9NT99 713 aa19.34■□□□□ 0.69
COL1A1-209ENST00000495677 GPR162Q16538 588 aa19.33■□□□□ 0.68
COL1A1-209ENST00000495677 ZNF827Q17R98 1081 aa19.33■□□□□ 0.68
COL1A1-209ENST00000495677 SLC27A3Q5K4L6 730 aa19.33■□□□□ 0.68
COL1A1-209ENST00000495677 LY75O60449 1722 aa19.33■□□□□ 0.68
COL1A1-209ENST00000495677 NLRP2Q9NX02 1062 aa19.31■□□□□ 0.68
COL1A1-209ENST00000495677 FAM208AQ9UK61 1670 aaKnown RBP19.3■□□□□ 0.68
COL1A1-209ENST00000495677 L3MBTL2Q969R5 705 aa19.3■□□□□ 0.68
COL1A1-209ENST00000495677 POLD1P28340 1107 aa19.29■□□□□ 0.68
COL1A1-209ENST00000495677 IFFO2Q5TF58 517 aa19.29■□□□□ 0.68
COL1A1-209ENST00000495677 GOLGB1Q14789 3259 aaKnown RBP19.29■□□□□ 0.68
COL1A1-209ENST00000495677 SHANK3Q9BYB0 1731 aa19.28■□□□□ 0.68
COL1A1-209ENST00000495677 GIGYF1O75420 1035 aaPredicted RBP19.28■□□□□ 0.68
COL1A1-209ENST00000495677 ANKRD24Q8TF21 1146 aa19.27■□□□□ 0.68
COL1A1-209ENST00000495677 SBNO2Q9Y2G9 1366 aa19.27■□□□□ 0.68
COL1A1-209ENST00000495677 PNPLA7Q6ZV29 1317 aa19.26■□□□□ 0.67
COL1A1-209ENST00000495677 CD163L1Q9NR16 1453 aa19.26■□□□□ 0.67
COL1A1-209ENST00000495677 ROCK2O75116 1388 aaKnown RBP19.24■□□□□ 0.67
COL1A1-209ENST00000495677 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.24■□□□□ 0.67
COL1A1-209ENST00000495677 GRIN3BO60391 1043 aa19.23■□□□□ 0.67
COL1A1-209ENST00000495677 NME9Q86XW9 330 aa19.23■□□□□ 0.67
COL1A1-209ENST00000495677 DOT1LQ8TEK3 1739 aa19.22■□□□□ 0.67
COL1A1-209ENST00000495677 IP6K1Q92551 441 aa19.22■□□□□ 0.67
COL1A1-209ENST00000495677 TFCP2L1Q9NZI6 479 aa19.22■□□□□ 0.67
COL1A1-209ENST00000495677 RGPD2P0DJD1 1756 aa19.21■□□□□ 0.67
COL1A1-209ENST00000495677 CEP350Q5VT06 3117 aa19.21■□□□□ 0.67
COL1A1-209ENST00000495677 ANKRD36BQ8N2N9 1353 aa19.2■□□□□ 0.66
COL1A1-209ENST00000495677 EDC4Q6P2E9 1401 aaKnown RBP19.2■□□□□ 0.66
COL1A1-209ENST00000495677 NLGN2Q8NFZ4 835 aa19.2■□□□□ 0.66
COL1A1-209ENST00000495677 DDX54Q8TDD1 881 aaKnown RBP19.2■□□□□ 0.66
COL1A1-209ENST00000495677 HDGFL2Q7Z4V5 671 aaPredicted RBP19.19■□□□□ 0.66
COL1A1-209ENST00000495677 KLHL34Q8N239 644 aa19.19■□□□□ 0.66
COL1A1-209ENST00000495677 PUS7Q96PZ0 661 aaKnown RBP19.19■□□□□ 0.66
COL1A1-209ENST00000495677 TAF1LQ8IZX4 1826 aa19.18■□□□□ 0.66
COL1A1-209ENST00000495677 PRIM1P49642 420 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms