RNA–Protein interactions for RNA: ENST00000495426.1

BBS9-213, Transcript of Bardet-Biedl syndrome 9, human

TSL 3

Gene BBS9, Length 481 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-213	ENST00000495426	GPHN	Q9NQX3	736 aa	Predicted RBP	10.89	□□□□□ -0.67
BBS9-213	ENST00000495426	TECPR2	O15040	1411 aa		10.89	□□□□□ -0.67
BBS9-213	ENST00000495426	RRBP1	Q9P2E9	1410 aa	Known RBP	10.89	□□□□□ -0.67
BBS9-213	ENST00000495426	NRAP	Q86VF7	1730 aa		10.89	□□□□□ -0.67
BBS9-213	ENST00000495426	CCDC144A	A2RUR9	1427 aa		10.88	□□□□□ -0.67
BBS9-213	ENST00000495426	LRPPRC	P42704	1394 aa	Known RBP	10.88	□□□□□ -0.67
BBS9-213	ENST00000495426	RPGRIP1L	Q68CZ1	1315 aa		10.87	□□□□□ -0.67
BBS9-213	ENST00000495426	RGPD1	P0DJD0	1748 aa		10.87	□□□□□ -0.67
BBS9-213	ENST00000495426	FOXO3	O43524	673 aa		10.87	□□□□□ -0.67
BBS9-213	ENST00000495426	C7	P10643	843 aa		10.87	□□□□□ -0.67
BBS9-213	ENST00000495426	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.87	□□□□□ -0.67
BBS9-213	ENST00000495426	COLQ	Q9Y215	455 aa	Predicted RBP	10.87	□□□□□ -0.67
BBS9-213	ENST00000495426	NUTM2F	A1L443	756 aa		10.86	□□□□□ -0.67
BBS9-213	ENST00000495426	TMC2	Q8TDI7	906 aa		10.86	□□□□□ -0.67
BBS9-213	ENST00000495426	TNS3	Q68CZ2	1445 aa		10.85	□□□□□ -0.67
BBS9-213	ENST00000495426	PPP1R15B	Q5SWA1	713 aa		10.85	□□□□□ -0.67
BBS9-213	ENST00000495426	DEFB132	Q7Z7B7	95 aa		10.85	□□□□□ -0.67
BBS9-213	ENST00000495426	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.85	□□□□□ -0.67
BBS9-213	ENST00000495426	UNC5CL	Q8IV45	518 aa		10.85	□□□□□ -0.67
BBS9-213	ENST00000495426	PLEKHH1	Q9ULM0	1364 aa		10.85	□□□□□ -0.67
BBS9-213	ENST00000495426	SPATA31A3	Q5VYP0	1347 aa		10.84	□□□□□ -0.67
BBS9-213	ENST00000495426	TNS1	Q9HBL0	1735 aa	Known RBP	10.84	□□□□□ -0.67
BBS9-213	ENST00000495426	POTEI	P0CG38	1075 aa		10.84	□□□□□ -0.67
BBS9-213	ENST00000495426	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.84	□□□□□ -0.67
BBS9-213	ENST00000495426	ADGRF5	Q8IZF2	1346 aa		10.84	□□□□□ -0.67
BBS9-213	ENST00000495426	SF3B2	Q13435	895 aa	Known RBP	10.83	□□□□□ -0.68
BBS9-213	ENST00000495426	WAPL	Q7Z5K2	1190 aa		10.83	□□□□□ -0.68
BBS9-213	ENST00000495426	STK26	Q9P289	416 aa		10.83	□□□□□ -0.68
BBS9-213	ENST00000495426	METRN	Q9UJH8	293 aa		10.83	□□□□□ -0.68
BBS9-213	ENST00000495426	CRYBG1	Q9Y4K1	1723 aa		10.83	□□□□□ -0.68
BBS9-213	ENST00000495426	PIK3C2G	O75747	1445 aa		10.83	□□□□□ -0.68
BBS9-213	ENST00000495426	ALS2	Q96Q42	1657 aa		10.82	□□□□□ -0.68
BBS9-213	ENST00000495426	COL14A1	Q05707	1796 aa	Known RBP	10.82	□□□□□ -0.68
BBS9-213	ENST00000495426	SPATA31E1	Q6ZUB1	1445 aa		10.82	□□□□□ -0.68
BBS9-213	ENST00000495426	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.82	□□□□□ -0.68
BBS9-213	ENST00000495426	NRXN1	Q9ULB1	1477 aa		10.81	□□□□□ -0.68
BBS9-213	ENST00000495426	ABCC11	Q96J66	1382 aa		10.81	□□□□□ -0.68
BBS9-213	ENST00000495426	SEPT12	Q8IYM1	358 aa		10.81	□□□□□ -0.68
BBS9-213	ENST00000495426	ADGRB2	O60241	1585 aa		10.81	□□□□□ -0.68
BBS9-213	ENST00000495426	ANKRD30B	Q9BXX2	1392 aa		10.8	□□□□□ -0.68
BBS9-213	ENST00000495426	CAMK2B	Q13554	666 aa		10.8	□□□□□ -0.68
BBS9-213	ENST00000495426	DSG2	Q14126	1118 aa		10.8	□□□□□ -0.68
BBS9-213	ENST00000495426	VPS72	Q15906	364 aa		10.8	□□□□□ -0.68
BBS9-213	ENST00000495426	KRT28	Q7Z3Y7	464 aa		10.8	□□□□□ -0.68
BBS9-213	ENST00000495426	THSD7A	Q9UPZ6	1657 aa		10.79	□□□□□ -0.68
BBS9-213	ENST00000495426	POTEF	A5A3E0	1075 aa		10.79	□□□□□ -0.68
BBS9-213	ENST00000495426	CCDC9	Q9Y3X0	531 aa	Known RBP	10.79	□□□□□ -0.68
BBS9-213	ENST00000495426	SBNO1	A3KN83	1393 aa		10.78	□□□□□ -0.68
BBS9-213	ENST00000495426	ARHGEF10	O15013	1369 aa		10.78	□□□□□ -0.68
BBS9-213	ENST00000495426		A0A0G2JS52	829 aa		10.78	□□□□□ -0.68
BBS9-213	ENST00000495426	C2orf72	A6NCS6	295 aa		10.78	□□□□□ -0.68
BBS9-213	ENST00000495426	FOXK1	P85037	733 aa		10.78	□□□□□ -0.68
BBS9-213	ENST00000495426	MYT1	Q01538	1121 aa		10.78	□□□□□ -0.68
BBS9-213	ENST00000495426	TMEM132E	Q6IEE7	984 aa		10.78	□□□□□ -0.68
BBS9-213	ENST00000495426	KRT27	Q7Z3Y8	459 aa		10.78	□□□□□ -0.68
BBS9-213	ENST00000495426	CABLES1	Q8TDN4	633 aa		10.78	□□□□□ -0.68
BBS9-213	ENST00000495426	PSD	A5PKW4	1024 aa	Predicted RBP	10.77	□□□□□ -0.69
BBS9-213	ENST00000495426	BAG6	P46379	1132 aa		10.77	□□□□□ -0.69
BBS9-213	ENST00000495426	RGL3	Q3MIN7	710 aa		10.77	□□□□□ -0.69
BBS9-213	ENST00000495426	ITSN1	Q15811	1721 aa		10.77	□□□□□ -0.69
BBS9-213	ENST00000495426	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.76	□□□□□ -0.69
BBS9-213	ENST00000495426	RREB1	Q92766	1687 aa		10.76	□□□□□ -0.69
BBS9-213	ENST00000495426	DLC1	Q96QB1	1528 aa		10.76	□□□□□ -0.69
BBS9-213	ENST00000495426	TULP1	O00294	542 aa	Predicted RBP	10.76	□□□□□ -0.69
BBS9-213	ENST00000495426	SEMA3E	O15041	775 aa		10.76	□□□□□ -0.69
BBS9-213	ENST00000495426	PLPP6	Q8IY26	295 aa		10.76	□□□□□ -0.69
BBS9-213	ENST00000495426	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.76	□□□□□ -0.69
BBS9-213	ENST00000495426	ANKAR	Q7Z5J8	1434 aa		10.75	□□□□□ -0.69
BBS9-213	ENST00000495426	KIF3C	O14782	793 aa		10.75	□□□□□ -0.69
BBS9-213	ENST00000495426	ONECUT3	O60422	494 aa	Predicted RBP	10.75	□□□□□ -0.69
BBS9-213	ENST00000495426	HRC	P23327	699 aa		10.75	□□□□□ -0.69
BBS9-213	ENST00000495426	PSME1	Q06323	249 aa		10.75	□□□□□ -0.69
BBS9-213	ENST00000495426	LMOD2	Q6P5Q4	547 aa		10.75	□□□□□ -0.69
BBS9-213	ENST00000495426	NUP188	Q5SRE5	1749 aa		10.74	□□□□□ -0.69
BBS9-213	ENST00000495426	DISP2	A7MBM2	1401 aa		10.74	□□□□□ -0.69
BBS9-213	ENST00000495426	FAM98C	Q17RN3	349 aa	Known RBP	10.73	□□□□□ -0.69
BBS9-213	ENST00000495426	C3orf67	Q6ZVT6	689 aa		10.73	□□□□□ -0.69
BBS9-213	ENST00000495426	TULP4	Q9NRJ4	1543 aa		10.73	□□□□□ -0.69
BBS9-213	ENST00000495426	FAM83G	A6ND36	823 aa		10.72	□□□□□ -0.69
BBS9-213	ENST00000495426	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.72	□□□□□ -0.69
BBS9-213	ENST00000495426	TMEM92	Q6UXU6	159 aa		10.72	□□□□□ -0.69
BBS9-213	ENST00000495426	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.72	□□□□□ -0.69
BBS9-213	ENST00000495426	DHX57	Q6P158	1386 aa	Known RBP	10.72	□□□□□ -0.69
BBS9-213	ENST00000495426	ADGRB1	O14514	1584 aa		10.72	□□□□□ -0.69
BBS9-213	ENST00000495426	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.72	□□□□□ -0.69
BBS9-213	ENST00000495426	TESPA1	A2RU30	521 aa	Predicted RBP	10.71	□□□□□ -0.69
BBS9-213	ENST00000495426	EN1	Q05925	392 aa	Predicted RBP	10.71	□□□□□ -0.69
BBS9-213	ENST00000495426	PMFBP1	Q8TBY8	1022 aa		10.71	□□□□□ -0.69
BBS9-213	ENST00000495426	SIRT1	Q96EB6	747 aa		10.71	□□□□□ -0.69
BBS9-213	ENST00000495426	PRAM1	Q96QH2	718 aa		10.71	□□□□□ -0.69
BBS9-213	ENST00000495426	EMILIN3	Q9NT22	766 aa		10.71	□□□□□ -0.69
BBS9-213	ENST00000495426	BTG4	Q9NY30	223 aa		10.71	□□□□□ -0.69
BBS9-213	ENST00000495426	DPYSL4	O14531	572 aa		10.7	□□□□□ -0.7
BBS9-213	ENST00000495426	R3HDM1	Q15032	1099 aa	Known RBP	10.7	□□□□□ -0.7
BBS9-213	ENST00000495426	FAM182B	Q5T319	152 aa		10.7	□□□□□ -0.7
BBS9-213	ENST00000495426	C14orf93	Q9H972	538 aa	Known RBP	10.7	□□□□□ -0.7
BBS9-213	ENST00000495426	TOPAZ1	Q8N9V7	1692 aa		10.69	□□□□□ -0.7
BBS9-213	ENST00000495426	EIF3A	Q14152	1382 aa	Known RBP	10.69	□□□□□ -0.7
BBS9-213	ENST00000495426	GPRASP1	Q5JY77	1395 aa		10.69	□□□□□ -0.7
BBS9-213	ENST00000495426	SPATA31A5	Q5VU36	1347 aa		10.69	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms