RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 SMC3Q9UQE7 1217 aa11.61□□□□□ -0.55
RPSA-209ENST00000495394 DAPK1P53355 1430 aa11.61□□□□□ -0.55
RPSA-209ENST00000495394 ADGBQ8N7X0 1667 aa11.61□□□□□ -0.55
RPSA-209ENST00000495394 SNRNP27Q8WVK2 155 aaKnown RBP11.61□□□□□ -0.55
RPSA-209ENST00000495394 CHMP4CQ96CF2 233 aa11.61□□□□□ -0.55
RPSA-209ENST00000495394 RAB3GAP2Q9H2M9 1393 aa11.61□□□□□ -0.55
RPSA-209ENST00000495394 RTEL1-TNFRSF6BF6WH68 1400 aa11.61□□□□□ -0.55
RPSA-209ENST00000495394 SETD5Q9C0A6 1442 aa11.61□□□□□ -0.55
RPSA-209ENST00000495394 DIP2CQ9Y2E4 1556 aa11.6□□□□□ -0.55
RPSA-209ENST00000495394 TDO2P48775 406 aa11.6□□□□□ -0.55
RPSA-209ENST00000495394 KCNV2Q8TDN2 545 aa11.6□□□□□ -0.55
RPSA-209ENST00000495394 SPAG9O60271 1321 aaKnown RBP11.6□□□□□ -0.55
RPSA-209ENST00000495394 ABCC5O15440 1437 aa11.59□□□□□ -0.55
RPSA-209ENST00000495394 PLXNC1O60486 1568 aa11.59□□□□□ -0.55
RPSA-209ENST00000495394 KCNA1Q09470 495 aa11.59□□□□□ -0.55
RPSA-209ENST00000495394 NEXNQ0ZGT2 675 aa11.59□□□□□ -0.55
RPSA-209ENST00000495394 GSE1Q14687 1217 aa11.59□□□□□ -0.55
RPSA-209ENST00000495394 BCORL1Q5H9F3 1711 aa11.59□□□□□ -0.55
RPSA-209ENST00000495394 REREQ9P2R6 1566 aa11.59□□□□□ -0.55
RPSA-209ENST00000495394 YEATS2Q9ULM3 1422 aa11.59□□□□□ -0.55
RPSA-209ENST00000495394 TSPY4P0CV99 314 aa11.59□□□□□ -0.55
RPSA-209ENST00000495394 TSPY10P0CW01 314 aa11.59□□□□□ -0.55
RPSA-209ENST00000495394 CCDC94Q9BW85 323 aaPredicted RBP11.59□□□□□ -0.55
RPSA-209ENST00000495394 ANAPC4Q9UJX5 808 aa11.59□□□□□ -0.55
RPSA-209ENST00000495394 SYNPO2Q9UMS6 1093 aa11.59□□□□□ -0.55
RPSA-209ENST00000495394 C9orf84Q5VXU9 1444 aa11.58□□□□□ -0.56
RPSA-209ENST00000495394 CLCN1P35523 988 aa11.58□□□□□ -0.56
RPSA-209ENST00000495394 HDGFL1Q5TGJ6 251 aa11.58□□□□□ -0.56
RPSA-209ENST00000495394 DRC1Q96MC2 740 aa11.58□□□□□ -0.56
RPSA-209ENST00000495394 ITGAEP38570 1179 aa11.58□□□□□ -0.56
RPSA-209ENST00000495394 ZC3H15Q8WU90 426 aaKnown RBP11.58□□□□□ -0.56
RPSA-209ENST00000495394 MADDQ8WXG6 1647 aa11.57□□□□□ -0.56
RPSA-209ENST00000495394 MTERF4Q7Z6M4 381 aaKnown RBP11.57□□□□□ -0.56
RPSA-209ENST00000495394 TRAK2O60296 914 aa11.56□□□□□ -0.56
RPSA-209ENST00000495394 COQ9O75208 318 aa11.56□□□□□ -0.56
RPSA-209ENST00000495394 STK10O94804 968 aaKnown RBP11.56□□□□□ -0.56
RPSA-209ENST00000495394 VASPP50552 380 aaPredicted RBP11.56□□□□□ -0.56
RPSA-209ENST00000495394 RPAINQ86UA6 219 aa11.56□□□□□ -0.56
RPSA-209ENST00000495394 NBPF3Q9H094 633 aa11.56□□□□□ -0.56
RPSA-209ENST00000495394 IRF2BPLQ9H1B7 796 aa11.56□□□□□ -0.56
RPSA-209ENST00000495394 RRAGDQ9NQL2 400 aaPredicted RBP11.56□□□□□ -0.56
RPSA-209ENST00000495394 FAM13BQ9NYF5 915 aa11.56□□□□□ -0.56
RPSA-209ENST00000495394 ATP10AO60312 1499 aa11.56□□□□□ -0.56
RPSA-209ENST00000495394 C1QTNF12Q5T7M4 302 aa11.56□□□□□ -0.56
RPSA-209ENST00000495394 CALR3Q96L12 384 aaKnown RBP11.56□□□□□ -0.56
RPSA-209ENST00000495394 KDM4CQ9H3R0 1056 aa11.56□□□□□ -0.56
RPSA-209ENST00000495394 JADE2Q9NQC1 790 aa11.56□□□□□ -0.56
RPSA-209ENST00000495394 ADGRL2O95490 1459 aa11.55□□□□□ -0.56
RPSA-209ENST00000495394 FAM200BP0CF97 657 aa11.55□□□□□ -0.56
RPSA-209ENST00000495394 PMM1Q92871 262 aa11.55□□□□□ -0.56
RPSA-209ENST00000495394 KLHL42Q9P2K6 505 aa11.55□□□□□ -0.56
RPSA-209ENST00000495394 MPHOSPH10O00566 681 aaKnown RBP11.55□□□□□ -0.56
RPSA-209ENST00000495394 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
RPSA-209ENST00000495394 COPB2P35606 906 aa11.55□□□□□ -0.56
RPSA-209ENST00000495394 ZC3H12AQ5D1E8 599 aaKnown RBP11.55□□□□□ -0.56
RPSA-209ENST00000495394 SIGLEC1Q9BZZ2 1709 aa11.54□□□□□ -0.56
RPSA-209ENST00000495394 CCDC172P0C7W6 258 aa11.54□□□□□ -0.56
RPSA-209ENST00000495394 CCDC184Q52MB2 194 aa11.54□□□□□ -0.56
RPSA-209ENST00000495394 TPX2Q9ULW0 747 aaKnown RBP11.54□□□□□ -0.56
RPSA-209ENST00000495394 PAK3O75914 559 aaPredicted RBP11.53□□□□□ -0.56
RPSA-209ENST00000495394 BDNFP23560 247 aa11.53□□□□□ -0.56
RPSA-209ENST00000495394 GIMAP6Q6P9H5 292 aa11.53□□□□□ -0.56
RPSA-209ENST00000495394 PIK3R5Q8WYR1 880 aa11.53□□□□□ -0.56
RPSA-209ENST00000495394 A2MP01023 1474 aa11.53□□□□□ -0.56
RPSA-209ENST00000495394 RIMS1Q86UR5 1692 aaKnown RBP11.53□□□□□ -0.56
RPSA-209ENST00000495394 IRX5P78411 483 aaPredicted RBP11.53□□□□□ -0.56
RPSA-209ENST00000495394 CLUAP1Q96AJ1 413 aa11.53□□□□□ -0.56
RPSA-209ENST00000495394 SPOCK3Q9BQ16 436 aa11.53□□□□□ -0.56
RPSA-209ENST00000495394 EFCC1Q9HA90 598 aa11.53□□□□□ -0.56
RPSA-209ENST00000495394 COMMD10Q9Y6G5 202 aa11.53□□□□□ -0.56
RPSA-209ENST00000495394 AGLP35573 1532 aa11.52□□□□□ -0.56
RPSA-209ENST00000495394 DUOX2Q9NRD8 1548 aa11.52□□□□□ -0.56
RPSA-209ENST00000495394 EIF2AK4Q9P2K8 1649 aaKnown RBP11.52□□□□□ -0.56
RPSA-209ENST00000495394 CT47A1Q5JQC4 288 aaPredicted RBP11.52□□□□□ -0.57
RPSA-209ENST00000495394 AMOTL1Q8IY63 956 aa11.52□□□□□ -0.57
RPSA-209ENST00000495394 VTI1AQ96AJ9 217 aa11.52□□□□□ -0.57
RPSA-209ENST00000495394 MYCBPQ99417 103 aaPredicted RBP11.52□□□□□ -0.57
RPSA-209ENST00000495394 TMX4Q9H1E5 349 aaPredicted RBP11.52□□□□□ -0.57
RPSA-209ENST00000495394 ZBTB47Q9UFB7 747 aaPredicted RBP11.52□□□□□ -0.57
RPSA-209ENST00000495394 ANKRD30AQ9BXX3 1397 aa11.52□□□□□ -0.57
RPSA-209ENST00000495394 SYNRGQ9UMZ2 1314 aa11.52□□□□□ -0.57
RPSA-209ENST00000495394 PTPRKQ15262 1439 aa11.52□□□□□ -0.57
RPSA-209ENST00000495394 NCOA1Q15788 1441 aa11.52□□□□□ -0.57
RPSA-209ENST00000495394 ROCK1Q13464 1354 aa11.52□□□□□ -0.57
RPSA-209ENST00000495394 ZSCAN20P17040 1043 aaPredicted RBP11.51□□□□□ -0.57
RPSA-209ENST00000495394 GYS2P54840 703 aa11.51□□□□□ -0.57
RPSA-209ENST00000495394 TSPYL1Q9H0U9 437 aa11.51□□□□□ -0.57
RPSA-209ENST00000495394 KIF15Q9NS87 1388 aa11.5□□□□□ -0.57
RPSA-209ENST00000495394 SMAPO00193 183 aa11.5□□□□□ -0.57
RPSA-209ENST00000495394 CD151P48509 253 aa11.5□□□□□ -0.57
RPSA-209ENST00000495394 SUDS3Q9H7L9 328 aaPredicted RBP11.5□□□□□ -0.57
RPSA-209ENST00000495394 GCC2Q8IWJ2 1684 aa11.5□□□□□ -0.57
RPSA-209ENST00000495394 DHX29Q7Z478 1369 aaKnown RBP11.5□□□□□ -0.57
RPSA-209ENST00000495394 CDC37Q16543 378 aaPredicted RBP11.5□□□□□ -0.57
RPSA-209ENST00000495394 CDCA7Q9BWT1 371 aaPredicted RBP11.5□□□□□ -0.57
RPSA-209ENST00000495394 ABCF2Q9UG63 623 aa11.5□□□□□ -0.57
RPSA-209ENST00000495394 CHIC2Q9UKJ5 165 aa11.5□□□□□ -0.57
RPSA-209ENST00000495394 ARIH1Q9Y4X5 557 aaPredicted RBP11.5□□□□□ -0.57
RPSA-209ENST00000495394 SREK1Q8WXA9 508 aaKnown RBP11.49□□□□□ -0.57
RPSA-209ENST00000495394 ERBINQ96RT1 1412 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms