RNA–Protein interactions for RNA: ENST00000495292.1

FAM107B-227, Transcript of family with sequence similarity 107 member B, human

TSL 4

Gene FAM107B, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM107B-227	ENST00000495292	COL14A1	Q05707	1796 aa	Known RBP	9.43	□□□□□ -0.9
FAM107B-227	ENST00000495292	NRAP	Q86VF7	1730 aa		9.43	□□□□□ -0.9
FAM107B-227	ENST00000495292	SLIT2	O94813	1529 aa		9.43	□□□□□ -0.9
FAM107B-227	ENST00000495292	BCL9L	Q86UU0	1499 aa		9.43	□□□□□ -0.9
FAM107B-227	ENST00000495292	POTEM	A6NI47	508 aa		9.43	□□□□□ -0.9
FAM107B-227	ENST00000495292	XPC	Q01831	940 aa	Predicted RBP	9.43	□□□□□ -0.9
FAM107B-227	ENST00000495292	KRT28	Q7Z3Y7	464 aa		9.43	□□□□□ -0.9
FAM107B-227	ENST00000495292	RNF25	Q96BH1	459 aa	Predicted RBP	9.43	□□□□□ -0.9
FAM107B-227	ENST00000495292	TRAK1	Q9UPV9	953 aa		9.43	□□□□□ -0.9
FAM107B-227	ENST00000495292	KDM2A	Q9Y2K7	1162 aa		9.43	□□□□□ -0.9
FAM107B-227	ENST00000495292	EP400	Q96L91	3159 aa		9.43	□□□□□ -0.9
FAM107B-227	ENST00000495292	BRWD3	Q6RI45	1802 aa		9.42	□□□□□ -0.9
FAM107B-227	ENST00000495292	ATAD2	Q6PL18	1390 aa		9.42	□□□□□ -0.9
FAM107B-227	ENST00000495292	SAFB2	Q14151	953 aa	Known RBP eCLIP	9.42	□□□□□ -0.9
FAM107B-227	ENST00000495292	POTEG	Q6S5H5	508 aa		9.42	□□□□□ -0.9
FAM107B-227	ENST00000495292	UPF1	Q92900	1129 aa	Known RBP eCLIP	9.42	□□□□□ -0.9
FAM107B-227	ENST00000495292	TRPM1	Q7Z4N2	1603 aa		9.42	□□□□□ -0.9
FAM107B-227	ENST00000495292	PHRF1	Q9P1Y6	1649 aa	Known RBP	9.42	□□□□□ -0.9
FAM107B-227	ENST00000495292	ATP7B	P35670	1465 aa		9.41	□□□□□ -0.9
FAM107B-227	ENST00000495292	GPRASP1	Q5JY77	1395 aa		9.41	□□□□□ -0.9
FAM107B-227	ENST00000495292	RIOK3	O14730	519 aa	Known RBP	9.41	□□□□□ -0.9
FAM107B-227	ENST00000495292	L3MBTL3	Q96JM7	780 aa	Predicted RBP	9.41	□□□□□ -0.9
FAM107B-227	ENST00000495292	GLI3	P10071	1580 aa		9.41	□□□□□ -0.9
FAM107B-227	ENST00000495292	MINK1	Q8N4C8	1332 aa	Predicted RBP	9.4	□□□□□ -0.9
FAM107B-227	ENST00000495292	WASL	O00401	505 aa	Predicted RBP	9.4	□□□□□ -0.9
FAM107B-227	ENST00000495292	HAP1	P54257	671 aa	Predicted RBP	9.4	□□□□□ -0.9
FAM107B-227	ENST00000495292	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	9.39	□□□□□ -0.91
FAM107B-227	ENST00000495292	DPY19L2	Q6NUT2	758 aa		9.38	□□□□□ -0.91
FAM107B-227	ENST00000495292	UNC5CL	Q8IV45	518 aa		9.38	□□□□□ -0.91
FAM107B-227	ENST00000495292	HIRIP3	Q9BW71	556 aa	Predicted RBP	9.38	□□□□□ -0.91
FAM107B-227	ENST00000495292	RALGAPB	Q86X10	1494 aa		9.38	□□□□□ -0.91
FAM107B-227	ENST00000495292	PRR36	Q9H6K5	1346 aa		9.37	□□□□□ -0.91
FAM107B-227	ENST00000495292	PMFBP1	Q8TBY8	1022 aa		9.37	□□□□□ -0.91
FAM107B-227	ENST00000495292	GJD4	Q96KN9	370 aa	Predicted RBP	9.37	□□□□□ -0.91
FAM107B-227	ENST00000495292	POLR3A	O14802	1390 aa	Predicted RBP	9.37	□□□□□ -0.91
FAM107B-227	ENST00000495292	LMOD2	Q6P5Q4	547 aa		9.36	□□□□□ -0.91
FAM107B-227	ENST00000495292	EFCAB3	Q8N7B9	438 aa		9.36	□□□□□ -0.91
FAM107B-227	ENST00000495292	NGDN	Q8NEJ9	315 aa	Known RBP	9.36	□□□□□ -0.91
FAM107B-227	ENST00000495292	AKAP12	Q02952	1782 aa		9.35	□□□□□ -0.91
FAM107B-227	ENST00000495292	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	9.35	□□□□□ -0.91
FAM107B-227	ENST00000495292	NRK	Q7Z2Y5	1582 aa		9.35	□□□□□ -0.91
FAM107B-227	ENST00000495292	CCDC125	Q86Z20	511 aa		9.35	□□□□□ -0.91
FAM107B-227	ENST00000495292	ZFP91	Q96JP5	570 aa	Predicted RBP	9.35	□□□□□ -0.91
FAM107B-227	ENST00000495292	CENPJ	Q9HC77	1338 aa	Predicted RBP	9.34	□□□□□ -0.91
FAM107B-227	ENST00000495292	RGPD1	P0DJD0	1748 aa		9.34	□□□□□ -0.91
FAM107B-227	ENST00000495292	VPS72	Q15906	364 aa		9.34	□□□□□ -0.91
FAM107B-227	ENST00000495292	CABLES1	Q8TDN4	633 aa		9.34	□□□□□ -0.91
FAM107B-227	ENST00000495292	NUDT16	Q96DE0	195 aa	Known RBP	9.34	□□□□□ -0.91
FAM107B-227	ENST00000495292	BRD4	O60885	1362 aa	Predicted RBP	9.34	□□□□□ -0.91
FAM107B-227	ENST00000495292	THSD7A	Q9UPZ6	1657 aa		9.33	□□□□□ -0.92
FAM107B-227	ENST00000495292	CDK19	Q9BWU1	502 aa		9.33	□□□□□ -0.92
FAM107B-227	ENST00000495292	LMO7	Q8WWI1	1683 aa		9.32	□□□□□ -0.92
FAM107B-227	ENST00000495292	PPIP5K1	Q6PFW1	1433 aa		9.32	□□□□□ -0.92
FAM107B-227	ENST00000495292	PLEKHG3	A1L390	1219 aa		9.32	□□□□□ -0.92
FAM107B-227	ENST00000495292	NBPF1	Q3BBV0	1214 aa		9.32	□□□□□ -0.92
FAM107B-227	ENST00000495292	C3orf67	Q6ZVT6	689 aa		9.32	□□□□□ -0.92
FAM107B-227	ENST00000495292	BLM	P54132	1417 aa	Predicted RBP	9.31	□□□□□ -0.92
FAM107B-227	ENST00000495292	MON2	Q7Z3U7	1717 aa		9.31	□□□□□ -0.92
FAM107B-227	ENST00000495292	FAM83G	A6ND36	823 aa		9.31	□□□□□ -0.92
FAM107B-227	ENST00000495292	ST18	O60284	1047 aa		9.31	□□□□□ -0.92
FAM107B-227	ENST00000495292	ONECUT3	O60422	494 aa	Predicted RBP	9.31	□□□□□ -0.92
FAM107B-227	ENST00000495292	L3MBTL2	Q969R5	705 aa		9.31	□□□□□ -0.92
FAM107B-227	ENST00000495292	BOLA1	Q9Y3E2	137 aa		9.31	□□□□□ -0.92
FAM107B-227	ENST00000495292	ROCK2	O75116	1388 aa	Known RBP	9.31	□□□□□ -0.92
FAM107B-227	ENST00000495292	WNK3	Q9BYP7	1800 aa		9.31	□□□□□ -0.92
FAM107B-227	ENST00000495292	ACE	P12821	1306 aa		9.31	□□□□□ -0.92
FAM107B-227	ENST00000495292	PIK3C2A	O00443	1686 aa		9.3	□□□□□ -0.92
FAM107B-227	ENST00000495292	ECM2	O94769	699 aa	Predicted RBP	9.3	□□□□□ -0.92
FAM107B-227	ENST00000495292	SRPK2	P78362	688 aa	Known RBP	9.3	□□□□□ -0.92
FAM107B-227	ENST00000495292	BTG4	Q9NY30	223 aa		9.3	□□□□□ -0.92
FAM107B-227	ENST00000495292	CCDC9	Q9Y3X0	531 aa	Known RBP	9.3	□□□□□ -0.92
FAM107B-227	ENST00000495292	TNS1	Q9HBL0	1735 aa	Known RBP	9.3	□□□□□ -0.92
FAM107B-227	ENST00000495292	USP54	Q70EL1	1684 aa		9.29	□□□□□ -0.92
FAM107B-227	ENST00000495292	SOX12	O15370	315 aa		9.29	□□□□□ -0.92
FAM107B-227	ENST00000495292	NBPF8	Q3BBV2	869 aa		9.29	□□□□□ -0.92
FAM107B-227	ENST00000495292	SEPT12	Q8IYM1	358 aa		9.29	□□□□□ -0.92
FAM107B-227	ENST00000495292	PRDM11	Q9NQV5	511 aa		9.29	□□□□□ -0.92
FAM107B-227	ENST00000495292	PCDH10	Q9P2E7	1040 aa		9.29	□□□□□ -0.92
FAM107B-227	ENST00000495292	SLIT3	O75094	1523 aa		9.29	□□□□□ -0.92
FAM107B-227	ENST00000495292	EVC2	Q86UK5	1308 aa		9.29	□□□□□ -0.92
FAM107B-227	ENST00000495292	PARP4	Q9UKK3	1724 aa	Known RBP	9.28	□□□□□ -0.92
FAM107B-227	ENST00000495292	CPD	O75976	1380 aa		9.28	□□□□□ -0.92
FAM107B-227	ENST00000495292	KIAA0232	Q92628	1395 aa		9.28	□□□□□ -0.92
FAM107B-227	ENST00000495292	SBNO2	Q9Y2G9	1366 aa		9.28	□□□□□ -0.92
FAM107B-227	ENST00000495292	SNPH	O15079	494 aa		9.28	□□□□□ -0.92
FAM107B-227	ENST00000495292	KRT27	Q7Z3Y8	459 aa		9.28	□□□□□ -0.92
FAM107B-227	ENST00000495292	USP6	P35125	1406 aa		9.28	□□□□□ -0.92
FAM107B-227	ENST00000495292	USP19	O94966	1318 aa		9.28	□□□□□ -0.92
FAM107B-227	ENST00000495292	SF3B2	Q13435	895 aa	Known RBP	9.27	□□□□□ -0.93
FAM107B-227	ENST00000495292	ABTB2	Q8N961	1025 aa		9.27	□□□□□ -0.93
FAM107B-227	ENST00000495292	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	9.27	□□□□□ -0.93
FAM107B-227	ENST00000495292	TAOK2	Q9UL54	1235 aa		9.27	□□□□□ -0.93
FAM107B-227	ENST00000495292	SPATA31A5	Q5VU36	1347 aa		9.27	□□□□□ -0.93
FAM107B-227	ENST00000495292	SPATA31A7	Q8IWB4	1347 aa		9.27	□□□□□ -0.93
FAM107B-227	ENST00000495292	RGPD5	Q99666	1765 aa		9.27	□□□□□ -0.93
FAM107B-227	ENST00000495292	ABCC6	O95255	1503 aa		9.26	□□□□□ -0.93
FAM107B-227	ENST00000495292	TONSL	Q96HA7	1378 aa		9.26	□□□□□ -0.93
FAM107B-227	ENST00000495292		A0A0G2JS52	829 aa		9.26	□□□□□ -0.93
FAM107B-227	ENST00000495292	MYT1	Q01538	1121 aa		9.26	□□□□□ -0.93
FAM107B-227	ENST00000495292	NEUROD1	Q13562	356 aa		9.26	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms