RNA–Protein interactions for RNA: ENST00000495212.1

HDGF-209, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-209ENST00000495212 PSDA5PKW4 1024 aaPredicted RBP28.2■■■□□ 2.1
HDGF-209ENST00000495212 EZH2Q15910 746 aaKnown RBP28.2■■■□□ 2.1
HDGF-209ENST00000495212 PARP4Q9UKK3 1724 aaKnown RBP28.2■■■□□ 2.1
HDGF-209ENST00000495212 SRCAPQ6ZRS2 3230 aa28.19■■■□□ 2.1
HDGF-209ENST00000495212 HDGFL2Q7Z4V5 671 aaPredicted RBP28.19■■■□□ 2.1
HDGF-209ENST00000495212 A0A1W2PP64 1363 aa28.18■■■□□ 2.1
HDGF-209ENST00000495212 WDR17Q8IZU2 1322 aa28.18■■■□□ 2.1
HDGF-209ENST00000495212 USP31Q70CQ4 1352 aa28.16■■■□□ 2.1
HDGF-209ENST00000495212 APBA3O96018 575 aa28.16■■■□□ 2.1
HDGF-209ENST00000495212 PCGF6Q9BYE7 350 aa28.16■■■□□ 2.1
HDGF-209ENST00000495212 CSB-PGBD3P0DP91 1061 aa28.15■■■□□ 2.1
HDGF-209ENST00000495212 LRRC37A3O60309 1634 aa28.14■■■□□ 2.1
HDGF-209ENST00000495212 WNK3Q9BYP7 1800 aa28.14■■■□□ 2.1
HDGF-209ENST00000495212 DISP2A7MBM2 1401 aa28.14■■■□□ 2.1
HDGF-209ENST00000495212 USP54Q70EL1 1684 aa28.13■■■□□ 2.09
HDGF-209ENST00000495212 EDC4Q6P2E9 1401 aaKnown RBP28.13■■■□□ 2.09
HDGF-209ENST00000495212 CAMKK2Q96RR4 588 aa28.13■■■□□ 2.09
HDGF-209ENST00000495212 PUS7Q96PZ0 661 aaKnown RBP28.12■■■□□ 2.09
HDGF-209ENST00000495212 TERF2IPQ9NYB0 399 aa28.12■■■□□ 2.09
HDGF-209ENST00000495212 LTN1O94822 1766 aa28.11■■■□□ 2.09
HDGF-209ENST00000495212 DDB1Q16531 1140 aa28.1■■■□□ 2.09
HDGF-209ENST00000495212 USP47Q96K76 1375 aa28.1■■■□□ 2.09
HDGF-209ENST00000495212 PEAK1Q9H792 1746 aa28.09■■■□□ 2.09
HDGF-209ENST00000495212 CARD10Q9BWT7 1032 aa28.09■■■□□ 2.09
HDGF-209ENST00000495212 R3HDM1Q15032 1099 aaKnown RBP28.08■■■□□ 2.09
HDGF-209ENST00000495212 PTF1AQ7RTS3 328 aa28.06■■■□□ 2.08
HDGF-209ENST00000495212 OVOS2A0A0J9YW53 1432 aa28.06■■■□□ 2.08
HDGF-209ENST00000495212 OVOS2Q6IE36 1432 aa28.06■■■□□ 2.08
HDGF-209ENST00000495212 SBF2Q86WG5 1849 aa28.06■■■□□ 2.08
HDGF-209ENST00000495212 FBLN1P23142 703 aa28.05■■■□□ 2.08
HDGF-209ENST00000495212 MARCH10Q8NA82 808 aaPredicted RBP28.05■■■□□ 2.08
HDGF-209ENST00000495212 OVOS2A0A0G2JMS6 1433 aa28.04■■■□□ 2.08
HDGF-209ENST00000495212 RREB1Q92766 1687 aa28.02■■■□□ 2.08
HDGF-209ENST00000495212 ABCC6O95255 1503 aa28.02■■■□□ 2.08
HDGF-209ENST00000495212 ERBB3P21860 1342 aa28.01■■■□□ 2.07
HDGF-209ENST00000495212 TMF1P82094 1093 aa28.01■■■□□ 2.07
HDGF-209ENST00000495212 ANKRD24Q8TF21 1146 aa28.01■■■□□ 2.07
HDGF-209ENST00000495212 NLRP2Q9NX02 1062 aa28.01■■■□□ 2.07
HDGF-209ENST00000495212 NUP188Q5SRE5 1749 aa28.01■■■□□ 2.07
HDGF-209ENST00000495212 NINLQ9Y2I6 1382 aa28■■■□□ 2.07
HDGF-209ENST00000495212 CDCA7Q9BWT1 371 aaPredicted RBP27.99■■■□□ 2.07
HDGF-209ENST00000495212 CCDC7Q96M83 1385 aa27.99■■■□□ 2.07
HDGF-209ENST00000495212 ANKRD36BQ8N2N9 1353 aa27.98■■■□□ 2.07
HDGF-209ENST00000495212 EXOC5O00471 708 aa27.97■■■□□ 2.07
HDGF-209ENST00000495212 LTV1Q96GA3 475 aaPredicted RBP27.97■■■□□ 2.07
HDGF-209ENST00000495212 SLC24A1O60721 1099 aa27.96■■■□□ 2.07
HDGF-209ENST00000495212 COG3Q96JB2 828 aa27.96■■■□□ 2.07
HDGF-209ENST00000495212 PARD3Q8TEW0 1356 aa27.96■■■□□ 2.07
HDGF-209ENST00000495212 LRP5O75197 1615 aa27.96■■■□□ 2.07
HDGF-209ENST00000495212 IP6K1Q92551 441 aa27.93■■■□□ 2.06
HDGF-209ENST00000495212 GGNBP2Q9H3C7 697 aa27.93■■■□□ 2.06
HDGF-209ENST00000495212 MAP3K19Q56UN5 1328 aa27.92■■■□□ 2.06
HDGF-209ENST00000495212 C11orf95C9JLR9 678 aaPredicted RBP27.92■■■□□ 2.06
HDGF-209ENST00000495212 TNS2Q63HR2 1409 aa27.92■■■□□ 2.06
HDGF-209ENST00000495212 FYB1O15117 783 aa27.91■■■□□ 2.06
HDGF-209ENST00000495212 BCL11BQ9C0K0 894 aaPredicted RBP27.91■■■□□ 2.06
HDGF-209ENST00000495212 TIMELESSQ9UNS1 1208 aa27.9■■■□□ 2.06
HDGF-209ENST00000495212 RGPD2P0DJD1 1756 aa27.89■■■□□ 2.06
HDGF-209ENST00000495212 IL2RBP14784 551 aa27.89■■■□□ 2.06
HDGF-209ENST00000495212 CLSPNQ9HAW4 1339 aa27.89■■■□□ 2.05
HDGF-209ENST00000495212 KCNQ2O43526 872 aa27.88■■■□□ 2.05
HDGF-209ENST00000495212 HOXC9P31274 260 aa27.88■■■□□ 2.05
HDGF-209ENST00000495212 RRS1Q15050 365 aaKnown RBP27.88■■■□□ 2.05
HDGF-209ENST00000495212 ACSBG1Q96GR2 724 aa27.88■■■□□ 2.05
HDGF-209ENST00000495212 MYOM1P52179 1685 aa27.87■■■□□ 2.05
HDGF-209ENST00000495212 BCL9O00512 1426 aa27.87■■■□□ 2.05
HDGF-209ENST00000495212 PLSCR1O15162 318 aa27.87■■■□□ 2.05
HDGF-209ENST00000495212 AMPHP49418 695 aa27.87■■■□□ 2.05
HDGF-209ENST00000495212 NBPF14Q5TI25 921 aa27.87■■■□□ 2.05
HDGF-209ENST00000495212 PROM2Q8N271 834 aa27.86■■■□□ 2.05
HDGF-209ENST00000495212 CARD14Q9BXL6 1004 aa27.85■■■□□ 2.05
HDGF-209ENST00000495212 KIF20BQ96Q89 1820 aa27.85■■■□□ 2.05
HDGF-209ENST00000495212 KAT6BQ8WYB5 2073 aa27.84■■■□□ 2.05
HDGF-209ENST00000495212 CDCA8Q53HL2 280 aa27.84■■■□□ 2.05
HDGF-209ENST00000495212 RGPD3A6NKT7 1758 aaPredicted RBP27.83■■■□□ 2.05
HDGF-209ENST00000495212 RGPD4Q7Z3J3 1758 aa27.83■■■□□ 2.05
HDGF-209ENST00000495212 CCER1Q8TC90 406 aaPredicted RBP27.83■■■□□ 2.05
HDGF-209ENST00000495212 ANO8Q9HCE9 1232 aaPredicted RBP27.83■■■□□ 2.05
HDGF-209ENST00000495212 POLR3GLQ9BT43 218 aa27.81■■■□□ 2.04
HDGF-209ENST00000495212 NSD3Q9BZ95 1437 aa27.8■■■□□ 2.04
HDGF-209ENST00000495212 FAM208AQ9UK61 1670 aaKnown RBP27.8■■■□□ 2.04
HDGF-209ENST00000495212 NHSQ6T4R5 1651 aa27.79■■■□□ 2.04
HDGF-209ENST00000495212 DDX54Q8TDD1 881 aaKnown RBP27.78■■■□□ 2.04
HDGF-209ENST00000495212 USHBP1Q8N6Y0 703 aa27.77■■■□□ 2.04
HDGF-209ENST00000495212 TXNRD1Q16881 649 aa27.76■■■□□ 2.03
HDGF-209ENST00000495212 NBPF6Q5VWK0 638 aa27.75■■■□□ 2.03
HDGF-209ENST00000495212 NBPF4Q96M43 638 aa27.75■■■□□ 2.03
HDGF-209ENST00000495212 PDGFDQ9GZP0 370 aaPredicted RBP27.75■■■□□ 2.03
HDGF-209ENST00000495212 BTAF1O14981 1849 aa27.74■■■□□ 2.03
HDGF-209ENST00000495212 HSPA5P11021 654 aaKnown RBP27.74■■■□□ 2.03
HDGF-209ENST00000495212 HSP90AB2PQ58FF8 381 aa27.74■■■□□ 2.03
HDGF-209ENST00000495212 RTL1A6NKG5 1358 aa27.73■■■□□ 2.03
HDGF-209ENST00000495212 MEGF6O75095 1541 aa27.73■■■□□ 2.03
HDGF-209ENST00000495212 SHANK3Q9BYB0 1731 aa27.72■■■□□ 2.03
HDGF-209ENST00000495212 EMILIN1Q9Y6C2 1016 aa27.71■■■□□ 2.03
HDGF-209ENST00000495212 CASZ1Q86V15 1759 aa27.68■■■□□ 2.02
HDGF-209ENST00000495212 EIF4G2P78344 907 aaKnown RBP eCLIP27.68■■■□□ 2.02
HDGF-209ENST00000495212 ZCRB1Q8TBF4 217 aaKnown RBP27.67■■■□□ 2.02
HDGF-209ENST00000495212 INSRP06213 1382 aa27.66■■■□□ 2.02
HDGF-209ENST00000495212 FLT4P35916 1363 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms