RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 NUTM2GQ5VZR2 741 aa21.79■■□□□ 1.08
CBX4-204ENST00000495122 NEFLP07196 543 aa21.78■■□□□ 1.08
CBX4-204ENST00000495122 CPDO75976 1380 aa21.77■■□□□ 1.08
CBX4-204ENST00000495122 FAM98CQ17RN3 349 aaKnown RBP21.77■■□□□ 1.08
CBX4-204ENST00000495122 KRT27Q7Z3Y8 459 aa21.77■■□□□ 1.08
CBX4-204ENST00000495122 SSH2Q76I76 1423 aa21.77■■□□□ 1.08
CBX4-204ENST00000495122 NSD2O96028 1365 aa21.76■■□□□ 1.07
CBX4-204ENST00000495122 CC2D1BQ5T0F9 858 aaKnown RBP21.76■■□□□ 1.07
CBX4-204ENST00000495122 ABTB2Q8N961 1025 aa21.76■■□□□ 1.07
CBX4-204ENST00000495122 LTN1O94822 1766 aa21.75■■□□□ 1.07
CBX4-204ENST00000495122 CHRNA2Q15822 529 aa21.75■■□□□ 1.07
CBX4-204ENST00000495122 ANKRD36BQ8N2N9 1353 aa21.74■■□□□ 1.07
CBX4-204ENST00000495122 SBF2Q86WG5 1849 aa21.74■■□□□ 1.07
CBX4-204ENST00000495122 ZC3H6P61129 1189 aaKnown RBP21.74■■□□□ 1.07
CBX4-204ENST00000495122 SMG6Q86US8 1419 aaKnown RBP21.73■■□□□ 1.07
CBX4-204ENST00000495122 CABP1Q9NZU7 370 aa21.73■■□□□ 1.07
CBX4-204ENST00000495122 SPATA31A1Q5TZJ5 1347 aa21.73■■□□□ 1.07
CBX4-204ENST00000495122 A0A0G2JS52 829 aa21.72■■□□□ 1.07
CBX4-204ENST00000495122 PPP2R1AP30153 589 aa21.72■■□□□ 1.07
CBX4-204ENST00000495122 MYT1Q01538 1121 aa21.72■■□□□ 1.07
CBX4-204ENST00000495122 SUPT16HQ9Y5B9 1047 aaKnown RBP21.72■■□□□ 1.07
CBX4-204ENST00000495122 COL5A2P05997 1499 aaPredicted RBP21.71■■□□□ 1.07
CBX4-204ENST00000495122 LRRC37A3O60309 1634 aa21.7■■□□□ 1.06
CBX4-204ENST00000495122 ERICH6BQ5W0A0 696 aa21.7■■□□□ 1.06
CBX4-204ENST00000495122 RREB1Q92766 1687 aa21.69■■□□□ 1.06
CBX4-204ENST00000495122 CNGB1Q14028 1251 aaPredicted RBP21.69■■□□□ 1.06
CBX4-204ENST00000495122 STRN4Q9NRL3 753 aa21.69■■□□□ 1.06
CBX4-204ENST00000495122 CPSF1Q10570 1443 aaKnown RBP21.69■■□□□ 1.06
CBX4-204ENST00000495122 PDE3BQ13370 1112 aa21.68■■□□□ 1.06
CBX4-204ENST00000495122 NSD3Q9BZ95 1437 aa21.68■■□□□ 1.06
CBX4-204ENST00000495122 NFAT5O94916 1531 aa21.68■■□□□ 1.06
CBX4-204ENST00000495122 PEAK1Q9H792 1746 aa21.67■■□□□ 1.06
CBX4-204ENST00000495122 CGNL1Q0VF96 1302 aa21.67■■□□□ 1.06
CBX4-204ENST00000495122 GCP02774 474 aa21.67■■□□□ 1.06
CBX4-204ENST00000495122 DEFB132Q7Z7B7 95 aa21.67■■□□□ 1.06
CBX4-204ENST00000495122 CARD14Q9BXL6 1004 aa21.67■■□□□ 1.06
CBX4-204ENST00000495122 PELP1Q8IZL8 1130 aaKnown RBP21.66■■□□□ 1.06
CBX4-204ENST00000495122 ZRANB1Q9UGI0 708 aa21.66■■□□□ 1.06
CBX4-204ENST00000495122 CD163L1Q9NR16 1453 aa21.65■■□□□ 1.06
CBX4-204ENST00000495122 SF3B2Q13435 895 aaKnown RBP21.65■■□□□ 1.06
CBX4-204ENST00000495122 NUP188Q5SRE5 1749 aa21.65■■□□□ 1.06
CBX4-204ENST00000495122 LRP5O75197 1615 aa21.65■■□□□ 1.06
CBX4-204ENST00000495122 ABCC6O95255 1503 aa21.65■■□□□ 1.06
CBX4-204ENST00000495122 NLRP6P59044 892 aa21.63■■□□□ 1.05
CBX4-204ENST00000495122 NUDCQ9Y266 331 aa21.63■■□□□ 1.05
CBX4-204ENST00000495122 RGPD3A6NKT7 1758 aaPredicted RBP21.63■■□□□ 1.05
CBX4-204ENST00000495122 RGPD4Q7Z3J3 1758 aa21.63■■□□□ 1.05
CBX4-204ENST00000495122 DISP2A7MBM2 1401 aa21.63■■□□□ 1.05
CBX4-204ENST00000495122 AATKQ6ZMQ8 1374 aa21.62■■□□□ 1.05
CBX4-204ENST00000495122 TTC21BQ7Z4L5 1316 aa21.62■■□□□ 1.05
CBX4-204ENST00000495122 EVA1CP58658 441 aa21.62■■□□□ 1.05
CBX4-204ENST00000495122 FAM182BQ5T319 152 aa21.62■■□□□ 1.05
CBX4-204ENST00000495122 LARP1Q6PKG0 1096 aaKnown RBP21.62■■□□□ 1.05
CBX4-204ENST00000495122 BARGINQ6ZT62 677 aa21.62■■□□□ 1.05
CBX4-204ENST00000495122 TERF2IPQ9NYB0 399 aa21.62■■□□□ 1.05
CBX4-204ENST00000495122 CRB1P82279 1406 aa21.62■■□□□ 1.05
CBX4-204ENST00000495122 TTC21AQ8NDW8 1320 aa21.61■■□□□ 1.05
CBX4-204ENST00000495122 WDR43Q15061 677 aaKnown RBP eCLIP21.61■■□□□ 1.05
CBX4-204ENST00000495122 NGEFQ8N5V2 710 aa21.61■■□□□ 1.05
CBX4-204ENST00000495122 ZNF692Q9BU19 519 aaPredicted RBP21.61■■□□□ 1.05
CBX4-204ENST00000495122 SLC12A5Q9H2X9 1139 aa21.61■■□□□ 1.05
CBX4-204ENST00000495122 ANKRD26Q9UPS8 1709 aa21.6■■□□□ 1.05
CBX4-204ENST00000495122 USP35Q9P2H5 1018 aa21.59■■□□□ 1.05
CBX4-204ENST00000495122 BAG6P46379 1132 aa21.58■■□□□ 1.05
CBX4-204ENST00000495122 FKBP8Q14318 412 aa21.58■■□□□ 1.05
CBX4-204ENST00000495122 FAM208AQ9UK61 1670 aaKnown RBP21.57■■□□□ 1.04
CBX4-204ENST00000495122 TCP11L2Q8N4U5 519 aa21.57■■□□□ 1.04
CBX4-204ENST00000495122 THRAP3Q9Y2W1 955 aaKnown RBP21.57■■□□□ 1.04
CBX4-204ENST00000495122 MORC1Q86VD1 984 aa21.56■■□□□ 1.04
CBX4-204ENST00000495122 KIF20BQ96Q89 1820 aa21.56■■□□□ 1.04
CBX4-204ENST00000495122 A0A1W2PP64 1363 aa21.56■■□□□ 1.04
CBX4-204ENST00000495122 ZBTB7CA1YPR0 619 aa21.55■■□□□ 1.04
CBX4-204ENST00000495122 HDGFL2Q7Z4V5 671 aaPredicted RBP21.55■■□□□ 1.04
CBX4-204ENST00000495122 USP31Q70CQ4 1352 aa21.54■■□□□ 1.04
CBX4-204ENST00000495122 FAM196AQ6ZSG2 479 aa21.53■■□□□ 1.04
CBX4-204ENST00000495122 KCNH5Q8NCM2 988 aa21.53■■□□□ 1.04
CBX4-204ENST00000495122 RGPD2P0DJD1 1756 aa21.53■■□□□ 1.04
CBX4-204ENST00000495122 EDC4Q6P2E9 1401 aaKnown RBP21.53■■□□□ 1.04
CBX4-204ENST00000495122 ARHGEF25Q86VW2 580 aa21.52■■□□□ 1.04
CBX4-204ENST00000495122 RNF123Q5XPI4 1314 aa21.52■■□□□ 1.03
CBX4-204ENST00000495122 WDR17Q8IZU2 1322 aa21.52■■□□□ 1.03
CBX4-204ENST00000495122 EN1Q05925 392 aaPredicted RBP21.51■■□□□ 1.03
CBX4-204ENST00000495122 AXIN2Q9Y2T1 843 aa21.51■■□□□ 1.03
CBX4-204ENST00000495122 ADAMTS8Q9UP79 889 aa21.5■■□□□ 1.03
CBX4-204ENST00000495122 OVOS2A0A0J9YW53 1432 aa21.49■■□□□ 1.03
CBX4-204ENST00000495122 OVOS2Q6IE36 1432 aa21.49■■□□□ 1.03
CBX4-204ENST00000495122 TRIM37O94972 964 aa21.49■■□□□ 1.03
CBX4-204ENST00000495122 CFAP53Q96M91 514 aa21.49■■□□□ 1.03
CBX4-204ENST00000495122 OVOS2A0A0G2JMS6 1433 aa21.48■■□□□ 1.03
CBX4-204ENST00000495122 SOX12O15370 315 aa21.47■■□□□ 1.03
CBX4-204ENST00000495122 NCBP3Q53F19 620 aaKnown RBP21.47■■□□□ 1.03
CBX4-204ENST00000495122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.47■■□□□ 1.03
CBX4-204ENST00000495122 NHSQ6T4R5 1651 aa21.47■■□□□ 1.03
CBX4-204ENST00000495122 TOM1L2Q6ZVM7 507 aa21.46■■□□□ 1.03
CBX4-204ENST00000495122 NME9Q86XW9 330 aa21.46■■□□□ 1.03
CBX4-204ENST00000495122 KAT6BQ8WYB5 2073 aa21.46■■□□□ 1.03
CBX4-204ENST00000495122 EZH2Q15910 746 aaKnown RBP21.45■■□□□ 1.02
CBX4-204ENST00000495122 CAMKK2Q96RR4 588 aa21.44■■□□□ 1.02
CBX4-204ENST00000495122 SHANK3Q9BYB0 1731 aa21.43■■□□□ 1.02
CBX4-204ENST00000495122 PSDA5PKW4 1024 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms