RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-222ENST00000495071 CD163L1Q9NR16 1453 aa16.69■□□□□ 0.26
SUPT20H-222ENST00000495071 DCTN1Q14203 1278 aa16.69■□□□□ 0.26
SUPT20H-222ENST00000495071 COG3Q96JB2 828 aa16.69■□□□□ 0.26
SUPT20H-222ENST00000495071 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
SUPT20H-222ENST00000495071 GRPEL1Q9HAV7 217 aa16.69■□□□□ 0.26
SUPT20H-222ENST00000495071 ZRANB1Q9UGI0 708 aa16.69■□□□□ 0.26
SUPT20H-222ENST00000495071 YEATS2Q9ULM3 1422 aa16.69■□□□□ 0.26
SUPT20H-222ENST00000495071 MED14O60244 1454 aa16.69■□□□□ 0.26
SUPT20H-222ENST00000495071 FAM83GA6ND36 823 aa16.69■□□□□ 0.26
SUPT20H-222ENST00000495071 GOLGA6L22H0YM25 854 aa16.69■□□□□ 0.26
SUPT20H-222ENST00000495071 NAP1L5Q96NT1 182 aaPredicted RBP16.69■□□□□ 0.26
SUPT20H-222ENST00000495071 CIZ1Q9ULV3 898 aaPredicted RBP16.69■□□□□ 0.26
SUPT20H-222ENST00000495071 PIK3C2BO00750 1634 aa16.69■□□□□ 0.26
SUPT20H-222ENST00000495071 K7ELQ4 463 aaPredicted RBP16.68■□□□□ 0.26
SUPT20H-222ENST00000495071 CDC45O75419 566 aa16.68■□□□□ 0.26
SUPT20H-222ENST00000495071 MLECQ14165 292 aa16.68■□□□□ 0.26
SUPT20H-222ENST00000495071 LRRC7Q96NW7 1537 aa16.68■□□□□ 0.26
SUPT20H-222ENST00000495071 C8orf58Q8NAV2 365 aa16.68■□□□□ 0.26
SUPT20H-222ENST00000495071 TRIM44Q96DX7 344 aaPredicted RBP16.68■□□□□ 0.26
SUPT20H-222ENST00000495071 ZNF692Q9BU19 519 aaPredicted RBP16.68■□□□□ 0.26
SUPT20H-222ENST00000495071 FAM135BQ49AJ0 1406 aa16.67■□□□□ 0.26
SUPT20H-222ENST00000495071 NEO1Q92859 1461 aa16.67■□□□□ 0.26
SUPT20H-222ENST00000495071 BRPF1P55201 1214 aaPredicted RBP16.67■□□□□ 0.26
SUPT20H-222ENST00000495071 CFAP44Q96MT7 982 aa16.66■□□□□ 0.26
SUPT20H-222ENST00000495071 CD2BP2O95400 341 aaKnown RBP16.66■□□□□ 0.26
SUPT20H-222ENST00000495071 SIRT2Q8IXJ6 389 aa16.66■□□□□ 0.26
SUPT20H-222ENST00000495071 IL13P35225 146 aa16.65■□□□□ 0.26
SUPT20H-222ENST00000495071 SKOR2Q2VWA4 1001 aaPredicted RBP16.65■□□□□ 0.26
SUPT20H-222ENST00000495071 DIP2CQ9Y2E4 1556 aa16.65■□□□□ 0.26
SUPT20H-222ENST00000495071 RAB3GAP1Q15042 981 aa16.64■□□□□ 0.25
SUPT20H-222ENST00000495071 TXNDC2Q86VQ3 553 aa16.64■□□□□ 0.25
SUPT20H-222ENST00000495071 ABCC4O15439 1325 aa16.64■□□□□ 0.25
SUPT20H-222ENST00000495071 PTMSP20962 102 aa16.63■□□□□ 0.25
SUPT20H-222ENST00000495071 KIF2CQ99661 725 aa16.63■□□□□ 0.25
SUPT20H-222ENST00000495071 ARHGEF40Q8TER5 1519 aa16.63■□□□□ 0.25
SUPT20H-222ENST00000495071 SOX12O15370 315 aa16.63■□□□□ 0.25
SUPT20H-222ENST00000495071 NCLP19338 710 aaKnown RBP16.63■□□□□ 0.25
SUPT20H-222ENST00000495071 SSFA2P28290 1259 aa16.63■□□□□ 0.25
SUPT20H-222ENST00000495071 NCKAP5LQ9HCH0 1330 aa16.62■□□□□ 0.25
SUPT20H-222ENST00000495071 WASLO00401 505 aaPredicted RBP16.62■□□□□ 0.25
SUPT20H-222ENST00000495071 CASC1Q6TDU7 716 aa16.62■□□□□ 0.25
SUPT20H-222ENST00000495071 GAS2L2Q8NHY3 880 aa16.62■□□□□ 0.25
SUPT20H-222ENST00000495071 NUDT16Q96DE0 195 aaKnown RBP16.61■□□□□ 0.25
SUPT20H-222ENST00000495071 ISY1Q9ULR0 285 aaKnown RBP16.61■□□□□ 0.25
SUPT20H-222ENST00000495071 DDX49Q9Y6V7 483 aaKnown RBP16.61■□□□□ 0.25
SUPT20H-222ENST00000495071 PTCH1Q13635 1447 aa16.61■□□□□ 0.25
SUPT20H-222ENST00000495071 DDIT3P35638 169 aa16.61■□□□□ 0.25
SUPT20H-222ENST00000495071 ANP32BQ92688 251 aaKnown RBP16.61■□□□□ 0.25
SUPT20H-222ENST00000495071 ZNF853P0CG23 659 aa16.61■□□□□ 0.25
SUPT20H-222ENST00000495071 C16orf71Q8IYS4 520 aaPredicted RBP16.61■□□□□ 0.25
SUPT20H-222ENST00000495071 ALKQ9UM73 1620 aa16.61■□□□□ 0.25
SUPT20H-222ENST00000495071 SULT6B1Q6IMI4 303 aa16.6■□□□□ 0.25
SUPT20H-222ENST00000495071 NCOA3Q9Y6Q9 1424 aa16.6■□□□□ 0.25
SUPT20H-222ENST00000495071 HAP1P54257 671 aaPredicted RBP16.6■□□□□ 0.25
SUPT20H-222ENST00000495071 PLEKHM2Q8IWE5 1019 aa16.6■□□□□ 0.25
SUPT20H-222ENST00000495071 GSPT1P15170 499 aaKnown RBP16.6■□□□□ 0.25
SUPT20H-222ENST00000495071 KRT24Q2M2I5 525 aa16.6■□□□□ 0.25
SUPT20H-222ENST00000495071 NUTM2FA1L443 756 aa16.59■□□□□ 0.25
SUPT20H-222ENST00000495071 ESF1Q9H501 851 aaKnown RBP16.59■□□□□ 0.25
SUPT20H-222ENST00000495071 MYO5BQ9ULV0 1848 aa16.59■□□□□ 0.25
SUPT20H-222ENST00000495071 CCDC61Q9Y6R9 512 aa16.59■□□□□ 0.25
SUPT20H-222ENST00000495071 RABEP1Q15276 862 aa16.59■□□□□ 0.25
SUPT20H-222ENST00000495071 INTS3Q68E01 1043 aaKnown RBP16.59■□□□□ 0.25
SUPT20H-222ENST00000495071 PIK3R4Q99570 1358 aa16.58■□□□□ 0.25
SUPT20H-222ENST00000495071 TMEM131LA2VDJ0 1609 aa16.58■□□□□ 0.25
SUPT20H-222ENST00000495071 RIMS2Q9UQ26 1411 aa16.58■□□□□ 0.25
SUPT20H-222ENST00000495071 AEBP1Q8IUX7 1158 aa16.58■□□□□ 0.24
SUPT20H-222ENST00000495071 DCTPP1Q9H773 170 aa16.58■□□□□ 0.24
SUPT20H-222ENST00000495071 ATP7BP35670 1465 aa16.58■□□□□ 0.24
SUPT20H-222ENST00000495071 SMARCA5O60264 1052 aaPredicted RBP16.58■□□□□ 0.24
SUPT20H-222ENST00000495071 TTC22Q5TAA0 569 aa16.58■□□□□ 0.24
SUPT20H-222ENST00000495071 MCM10Q7L590 875 aa16.58■□□□□ 0.24
SUPT20H-222ENST00000495071 EDC4Q6P2E9 1401 aaKnown RBP16.58■□□□□ 0.24
SUPT20H-222ENST00000495071 CLCN1P35523 988 aa16.57■□□□□ 0.24
SUPT20H-222ENST00000495071 SLC4A10Q6U841 1118 aa16.57■□□□□ 0.24
SUPT20H-222ENST00000495071 GAS2L3Q86XJ1 694 aa16.57■□□□□ 0.24
SUPT20H-222ENST00000495071 ANKRD26Q9UPS8 1709 aa16.57■□□□□ 0.24
SUPT20H-222ENST00000495071 ESPNB1AK53 854 aa16.57■□□□□ 0.24
SUPT20H-222ENST00000495071 MCTP1Q6DN14 999 aa16.56■□□□□ 0.24
SUPT20H-222ENST00000495071 OTUD7AQ8TE49 926 aaPredicted RBP16.56■□□□□ 0.24
SUPT20H-222ENST00000495071 PREX1Q8TCU6 1659 aa16.55■□□□□ 0.24
SUPT20H-222ENST00000495071 BAG4O95429 457 aaKnown RBP16.55■□□□□ 0.24
SUPT20H-222ENST00000495071 RPAP2Q8IXW5 612 aaPredicted RBP16.55■□□□□ 0.24
SUPT20H-222ENST00000495071 ANKRD44Q8N8A2 993 aa16.55■□□□□ 0.24
SUPT20H-222ENST00000495071 ST18O60284 1047 aa16.55■□□□□ 0.24
SUPT20H-222ENST00000495071 CYB5RLQ6IPT4 315 aa16.55■□□□□ 0.24
SUPT20H-222ENST00000495071 KIF20BQ96Q89 1820 aa16.55■□□□□ 0.24
SUPT20H-222ENST00000495071 FAM69CQ0P6D2 419 aa16.54■□□□□ 0.24
SUPT20H-222ENST00000495071 NUCB2P80303 420 aa16.54■□□□□ 0.24
SUPT20H-222ENST00000495071 SLC4A2P04920 1241 aa16.54■□□□□ 0.24
SUPT20H-222ENST00000495071 CLTCQ00610 1675 aaKnown RBP16.53■□□□□ 0.24
SUPT20H-222ENST00000495071 SDSP20132 328 aa16.53■□□□□ 0.24
SUPT20H-222ENST00000495071 MEIS3Q99687 375 aa16.53■□□□□ 0.24
SUPT20H-222ENST00000495071 CDC42BPGQ6DT37 1551 aa16.53■□□□□ 0.24
SUPT20H-222ENST00000495071 HMMRO75330 724 aa16.53■□□□□ 0.24
SUPT20H-222ENST00000495071 NASPP49321 788 aaPredicted RBP16.53■□□□□ 0.24
SUPT20H-222ENST00000495071 MIS18AQ9NYP9 233 aa16.53■□□□□ 0.24
SUPT20H-222ENST00000495071 CDK12Q9NYV4 1490 aaPredicted RBP16.53■□□□□ 0.24
SUPT20H-222ENST00000495071 EIF4A2Q14240 407 aaKnown RBP16.52■□□□□ 0.24
SUPT20H-222ENST00000495071 CEP85Q6P2H3 762 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms