RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 YEATS2Q9ULM3 1422 aa19.11■□□□□ 0.65
SDF4-207ENST00000494748 GSPT1P15170 499 aaKnown RBP19.11■□□□□ 0.65
SDF4-207ENST00000494748 MAP2P11137 1827 aaKnown RBP19.11■□□□□ 0.65
SDF4-207ENST00000494748 NASPP49321 788 aaPredicted RBP19.11■□□□□ 0.65
SDF4-207ENST00000494748 ABCC4O15439 1325 aa19.1■□□□□ 0.65
SDF4-207ENST00000494748 VAMP4O75379 141 aa19.09■□□□□ 0.65
SDF4-207ENST00000494748 ZNF445P59923 1031 aa19.09■□□□□ 0.65
SDF4-207ENST00000494748 ZSCAN30Q86W11 494 aa19.09■□□□□ 0.65
SDF4-207ENST00000494748 ARHGAP45Q92619 1136 aa19.09■□□□□ 0.65
SDF4-207ENST00000494748 ZNF428Q96B54 188 aa19.08■□□□□ 0.65
SDF4-207ENST00000494748 NUTM2DQ5VT03 806 aaPredicted RBP19.08■□□□□ 0.64
SDF4-207ENST00000494748 OFD1O75665 1012 aa19.08■□□□□ 0.64
SDF4-207ENST00000494748 KIAA1211Q6ZU35 1233 aa19.08■□□□□ 0.64
SDF4-207ENST00000494748 TSPYL6Q8N831 410 aa19.08■□□□□ 0.64
SDF4-207ENST00000494748 ZFYVE9O95405 1425 aa19.07■□□□□ 0.64
SDF4-207ENST00000494748 DIAPH1O60610 1272 aaKnown RBP19.07■□□□□ 0.64
SDF4-207ENST00000494748 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.07■□□□□ 0.64
SDF4-207ENST00000494748 CDC45O75419 566 aa19.06■□□□□ 0.64
SDF4-207ENST00000494748 LMBRD1Q9NUN5 540 aa19.06■□□□□ 0.64
SDF4-207ENST00000494748 SAFB2Q14151 953 aaKnown RBP eCLIP19.05■□□□□ 0.64
SDF4-207ENST00000494748 PKP1Q13835 747 aa19.05■□□□□ 0.64
SDF4-207ENST00000494748 DDX49Q9Y6V7 483 aaKnown RBP19.05■□□□□ 0.64
SDF4-207ENST00000494748 MLH3Q9UHC1 1453 aa19.05■□□□□ 0.64
SDF4-207ENST00000494748 FCHSD2O94868 740 aa19.05■□□□□ 0.64
SDF4-207ENST00000494748 PLEKHM2Q8IWE5 1019 aa19.05■□□□□ 0.64
SDF4-207ENST00000494748 PDLIM2Q96JY6 352 aa19.05■□□□□ 0.64
SDF4-207ENST00000494748 TUBGCP6Q96RT7 1819 aa19.04■□□□□ 0.64
SDF4-207ENST00000494748 POGZQ7Z3K3 1410 aa19.04■□□□□ 0.64
SDF4-207ENST00000494748 ZNF853P0CG23 659 aa19.03■□□□□ 0.64
SDF4-207ENST00000494748 ZSCAN23Q3MJ62 389 aa19.03■□□□□ 0.64
SDF4-207ENST00000494748 ATAD2Q6PL18 1390 aa19.03■□□□□ 0.64
SDF4-207ENST00000494748 PHACTR3Q96KR7 559 aa19.03■□□□□ 0.64
SDF4-207ENST00000494748 ASXL2Q76L83 1435 aa19.03■□□□□ 0.64
SDF4-207ENST00000494748 THUMPD2Q9BTF0 503 aaKnown RBP19.03■□□□□ 0.64
SDF4-207ENST00000494748 PDCL3Q9H2J4 239 aa19.03■□□□□ 0.64
SDF4-207ENST00000494748 PRKAR2BP31323 418 aa19.02■□□□□ 0.64
SDF4-207ENST00000494748 RBSNQ9H1K0 784 aa19.02■□□□□ 0.64
SDF4-207ENST00000494748 USP26Q9BXU7 913 aa19.02■□□□□ 0.64
SDF4-207ENST00000494748 TMEM131LA2VDJ0 1609 aa19.02■□□□□ 0.63
SDF4-207ENST00000494748 ARHGEF40Q8TER5 1519 aa19.02■□□□□ 0.63
SDF4-207ENST00000494748 VGFO15240 615 aaPredicted RBP19.01■□□□□ 0.63
SDF4-207ENST00000494748 RABEP1Q15276 862 aa19.01■□□□□ 0.63
SDF4-207ENST00000494748 ATP10DQ9P241 1426 aa19.01■□□□□ 0.63
SDF4-207ENST00000494748 GOLGA6L22H0YM25 854 aa19.01■□□□□ 0.63
SDF4-207ENST00000494748 TERF1P54274 439 aa19.01■□□□□ 0.63
SDF4-207ENST00000494748 SRPK2P78362 688 aaKnown RBP19.01■□□□□ 0.63
SDF4-207ENST00000494748 ZDHHC9Q9Y397 364 aa19.01■□□□□ 0.63
SDF4-207ENST00000494748 HS1BP3Q53T59 392 aa19■□□□□ 0.63
SDF4-207ENST00000494748 MCTP1Q6DN14 999 aa19■□□□□ 0.63
SDF4-207ENST00000494748 TTC22Q5TAA0 569 aa19■□□□□ 0.63
SDF4-207ENST00000494748 GPT2Q8TD30 523 aa19■□□□□ 0.63
SDF4-207ENST00000494748 YTHDC2Q9H6S0 1430 aaKnown RBP18.99■□□□□ 0.63
SDF4-207ENST00000494748 NFE2L2Q16236 605 aa18.99■□□□□ 0.63
SDF4-207ENST00000494748 CAVIN1Q6NZI2 390 aaKnown RBP18.99■□□□□ 0.63
SDF4-207ENST00000494748 GGT6Q6P531 493 aa18.99■□□□□ 0.63
SDF4-207ENST00000494748 MBIPQ9NS73 344 aa18.99■□□□□ 0.63
SDF4-207ENST00000494748 NOL7Q9UMY1 257 aaKnown RBP18.99■□□□□ 0.63
SDF4-207ENST00000494748 RGS12O14924 1447 aa18.98■□□□□ 0.63
SDF4-207ENST00000494748 ZNF500O60304 480 aaPredicted RBP18.98■□□□□ 0.63
SDF4-207ENST00000494748 FBLN1P23142 703 aa18.98■□□□□ 0.63
SDF4-207ENST00000494748 CHMP4BQ9H444 224 aaKnown RBP18.98■□□□□ 0.63
SDF4-207ENST00000494748 DCTPP1Q9H773 170 aa18.98■□□□□ 0.63
SDF4-207ENST00000494748 TERF2IPQ9NYB0 399 aa18.98■□□□□ 0.63
SDF4-207ENST00000494748 POLKQ9UBT6 870 aa18.98■□□□□ 0.63
SDF4-207ENST00000494748 KIF24Q5T7B8 1368 aa18.98■□□□□ 0.63
SDF4-207ENST00000494748 IFT57Q9NWB7 429 aa18.97■□□□□ 0.63
SDF4-207ENST00000494748 PRIM1P49642 420 aaKnown RBP18.97■□□□□ 0.63
SDF4-207ENST00000494748 NUCB2P80303 420 aa18.97■□□□□ 0.63
SDF4-207ENST00000494748 C16orf71Q8IYS4 520 aaPredicted RBP18.97■□□□□ 0.63
SDF4-207ENST00000494748 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.97■□□□□ 0.63
SDF4-207ENST00000494748 ZGPATQ8N5A5 531 aaKnown RBP18.96■□□□□ 0.63
SDF4-207ENST00000494748 STK26Q9P289 416 aa18.96■□□□□ 0.63
SDF4-207ENST00000494748 MINK1Q8N4C8 1332 aaPredicted RBP18.96■□□□□ 0.63
SDF4-207ENST00000494748 C8orf58Q8NAV2 365 aa18.96■□□□□ 0.63
SDF4-207ENST00000494748 OTUD7AQ8TE49 926 aaPredicted RBP18.96■□□□□ 0.63
SDF4-207ENST00000494748 PREX1Q8TCU6 1659 aa18.95■□□□□ 0.62
SDF4-207ENST00000494748 RBM27Q9P2N5 1060 aaKnown RBP18.95■□□□□ 0.62
SDF4-207ENST00000494748 MSNP26038 577 aaKnown RBP18.94■□□□□ 0.62
SDF4-207ENST00000494748 PRAM1Q96QH2 718 aa18.94■□□□□ 0.62
SDF4-207ENST00000494748 ELL2O00472 640 aaPredicted RBP18.94■□□□□ 0.62
SDF4-207ENST00000494748 CHAMP1Q96JM3 812 aa18.94■□□□□ 0.62
SDF4-207ENST00000494748 NSFL1CQ9UNZ2 370 aaKnown RBP18.94■□□□□ 0.62
SDF4-207ENST00000494748 GNAI1P63096 354 aa18.93■□□□□ 0.62
SDF4-207ENST00000494748 CALD1Q05682 793 aaKnown RBP18.93■□□□□ 0.62
SDF4-207ENST00000494748 DIP2CQ9Y2E4 1556 aa18.93■□□□□ 0.62
SDF4-207ENST00000494748 ALKQ9UM73 1620 aa18.93■□□□□ 0.62
SDF4-207ENST00000494748 HMOX1P09601 288 aa18.93■□□□□ 0.62
SDF4-207ENST00000494748 TWISTNBQ3B726 338 aaPredicted RBP18.93■□□□□ 0.62
SDF4-207ENST00000494748 IDI1Q13907 227 aa18.92■□□□□ 0.62
SDF4-207ENST00000494748 TMEM63CQ9P1W3 806 aa18.92■□□□□ 0.62
SDF4-207ENST00000494748 SETD1AO15047 1707 aaKnown RBP18.92■□□□□ 0.62
SDF4-207ENST00000494748 ANP32BQ92688 251 aaKnown RBP18.92■□□□□ 0.62
SDF4-207ENST00000494748 CWC22Q9HCG8 908 aaKnown RBP18.92■□□□□ 0.62
SDF4-207ENST00000494748 CDK12Q9NYV4 1490 aaPredicted RBP18.92■□□□□ 0.62
SDF4-207ENST00000494748 SDSP20132 328 aa18.91■□□□□ 0.62
SDF4-207ENST00000494748 IL13P35225 146 aa18.91■□□□□ 0.62
SDF4-207ENST00000494748 RIMS2Q9UQ26 1411 aa18.91■□□□□ 0.62
SDF4-207ENST00000494748 ATP7BP35670 1465 aa18.91■□□□□ 0.62
SDF4-207ENST00000494748 CABP1Q9NZU7 370 aa18.91■□□□□ 0.62
SDF4-207ENST00000494748 PRPF40AO75400 957 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms