RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 USP32Q8NFA0 1604 aa3.49□□□□□ -1.85
MDC1-208ENST00000494654 ESPNB1AK53 854 aa3.49□□□□□ -1.85
MDC1-208ENST00000494654 CANXP27824 592 aaKnown RBP3.49□□□□□ -1.85
MDC1-208ENST00000494654 GTF2E1P29083 439 aaPredicted RBP3.49□□□□□ -1.85
MDC1-208ENST00000494654 MRE11P49959 708 aa3.49□□□□□ -1.85
MDC1-208ENST00000494654 DMTNQ08495 405 aa3.49□□□□□ -1.85
MDC1-208ENST00000494654 MMRN1Q13201 1228 aa3.49□□□□□ -1.85
MDC1-208ENST00000494654 PDE3BQ13370 1112 aa3.49□□□□□ -1.85
MDC1-208ENST00000494654 NUDT18Q6ZVK8 323 aa3.49□□□□□ -1.85
MDC1-208ENST00000494654 CENPQQ7L2Z9 268 aaPredicted RBP3.49□□□□□ -1.85
MDC1-208ENST00000494654 TTC13Q8NBP0 860 aa3.49□□□□□ -1.85
MDC1-208ENST00000494654 EXOC6Q8TAG9 804 aa3.49□□□□□ -1.85
MDC1-208ENST00000494654 FBXO41Q8TF61 875 aa3.49□□□□□ -1.85
MDC1-208ENST00000494654 HIRIP3Q9BW71 556 aaPredicted RBP3.49□□□□□ -1.85
MDC1-208ENST00000494654 PLSCR2Q9NRY7 297 aa3.49□□□□□ -1.85
MDC1-208ENST00000494654 UNC13BO14795 1591 aa3.49□□□□□ -1.85
MDC1-208ENST00000494654 MYO3AQ8NEV4 1616 aa3.48□□□□□ -1.85
MDC1-208ENST00000494654 ERBB4Q15303 1308 aa3.48□□□□□ -1.85
MDC1-208ENST00000494654 ITSN1Q15811 1721 aa3.48□□□□□ -1.85
MDC1-208ENST00000494654 ONECUT3O60422 494 aaPredicted RBP3.48□□□□□ -1.85
MDC1-208ENST00000494654 XRCC6P12956 609 aaKnown RBP eCLIP3.48□□□□□ -1.85
MDC1-208ENST00000494654 RGS3P49796 1198 aa3.48□□□□□ -1.85
MDC1-208ENST00000494654 BCAMP50895 628 aa3.48□□□□□ -1.85
MDC1-208ENST00000494654 CNGB1Q14028 1251 aaPredicted RBP3.48□□□□□ -1.85
MDC1-208ENST00000494654 BECN1Q14457 450 aa3.48□□□□□ -1.85
MDC1-208ENST00000494654 TATDN2Q93075 761 aa3.48□□□□□ -1.85
MDC1-208ENST00000494654 PNMA3Q9UL41 463 aa3.48□□□□□ -1.85
MDC1-208ENST00000494654 ADGRG1Q9Y653 693 aa3.48□□□□□ -1.85
MDC1-208ENST00000494654 KIAA0586Q9BVV6 1533 aa3.48□□□□□ -1.85
MDC1-208ENST00000494654 PARD3Q8TEW0 1356 aa3.48□□□□□ -1.85
MDC1-208ENST00000494654 ADGRL2O95490 1459 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 PZPP20742 1482 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 MYBBP1AQ9BQG0 1328 aaKnown RBP3.47□□□□□ -1.85
MDC1-208ENST00000494654 ADGRB2O60241 1585 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 DIP2BQ9P265 1576 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 DDX11L8A8MPP1 907 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 GNPATO15228 680 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 OFD1O75665 1012 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 FCHSD2O94868 740 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 KIF20AO95235 890 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 PTMSP20962 102 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 CCDC173Q0VFZ6 552 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 TAF3Q5VWG9 929 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 KIAA1211Q6ZU35 1233 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 KCTD12Q96CX2 325 aaKnown RBP3.47□□□□□ -1.85
MDC1-208ENST00000494654 TRIM44Q96DX7 344 aaPredicted RBP3.47□□□□□ -1.85
MDC1-208ENST00000494654 STAC3Q96MF2 364 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 ARXQ96QS3 562 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 EYA1Q99502 592 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 REPIN1Q9BWE0 567 aaKnown RBP3.47□□□□□ -1.85
MDC1-208ENST00000494654 SLC4A5Q9BY07 1137 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 GRPEL1Q9HAV7 217 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 SLC24A3Q9HC58 644 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 RABGEF1Q9UJ41 708 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 RCAN3Q9UKA8 241 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 NAP1L2Q9ULW6 460 aaPredicted RBP3.47□□□□□ -1.85
MDC1-208ENST00000494654 ROCK1Q13464 1354 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 MAGI1Q96QZ7 1491 aaPredicted RBP3.47□□□□□ -1.85
MDC1-208ENST00000494654 KIF20BQ96Q89 1820 aa3.47□□□□□ -1.85
MDC1-208ENST00000494654 IQGAP2Q13576 1575 aa3.46□□□□□ -1.85
MDC1-208ENST00000494654 USP19O94966 1318 aa3.46□□□□□ -1.85
MDC1-208ENST00000494654 PRG4Q92954 1404 aaPredicted RBP3.46□□□□□ -1.86
MDC1-208ENST00000494654 IQGAP3Q86VI3 1631 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 RAPGEF6Q8TEU7 1601 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 MADDQ8WXG6 1647 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 TK2O00142 265 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 DYNC1I1O14576 645 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 ZMYND10O75800 440 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 LETM1O95202 739 aaPredicted RBP3.46□□□□□ -1.86
MDC1-208ENST00000494654 RIPK4P57078 832 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 HIC1Q14526 733 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 TPRNQ4KMQ1 711 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 SMYD5Q6GMV2 418 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 SAMD7Q7Z3H4 446 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 CCDC102AQ96A19 550 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 ZFRQ96KR1 1074 aaKnown RBP3.46□□□□□ -1.86
MDC1-208ENST00000494654 PANK2Q9BZ23 570 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 ANTXR1Q9H6X2 564 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 MTUS2Q5JR59 1369 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 USP47Q96K76 1375 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 ANKRD30AQ9BXX3 1397 aa3.46□□□□□ -1.86
MDC1-208ENST00000494654 MAPK8IP3Q9UPT6 1336 aa3.45□□□□□ -1.86
MDC1-208ENST00000494654 ABCA10Q8WWZ4 1543 aa3.45□□□□□ -1.86
MDC1-208ENST00000494654 SETD1AO15047 1707 aaKnown RBP3.45□□□□□ -1.86
MDC1-208ENST00000494654 RCCD1A6NED2 376 aa3.45□□□□□ -1.86
MDC1-208ENST00000494654 SOCS7O14512 581 aa3.45□□□□□ -1.86
MDC1-208ENST00000494654 MCM4P33991 863 aa3.45□□□□□ -1.86
MDC1-208ENST00000494654 RANGAP1P46060 587 aaPredicted RBP3.45□□□□□ -1.86
MDC1-208ENST00000494654 HSPA2P54652 639 aa3.45□□□□□ -1.86
MDC1-208ENST00000494654 FAM50AQ14320 339 aaKnown RBP3.45□□□□□ -1.86
MDC1-208ENST00000494654 HS1BP3Q53T59 392 aa3.45□□□□□ -1.86
MDC1-208ENST00000494654 SWT1Q5T5J6 900 aaKnown RBP3.45□□□□□ -1.86
MDC1-208ENST00000494654 BARGINQ6ZT62 677 aa3.45□□□□□ -1.86
MDC1-208ENST00000494654 METTL3Q86U44 580 aaKnown RBP3.45□□□□□ -1.86
MDC1-208ENST00000494654 ZSCAN30Q86W11 494 aa3.45□□□□□ -1.86
MDC1-208ENST00000494654 PXYLP1Q8TE99 480 aa3.45□□□□□ -1.86
MDC1-208ENST00000494654 PNISRQ8TF01 805 aaKnown RBP3.45□□□□□ -1.86
MDC1-208ENST00000494654 PPP1R9BQ96SB3 815 aa3.45□□□□□ -1.86
MDC1-208ENST00000494654 CRBNQ96SW2 442 aa3.45□□□□□ -1.86
MDC1-208ENST00000494654 CCDC94Q9BW85 323 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms