RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 BCAR3O75815 825 aa11.03□□□□□ -0.64
RAF1-212ENST00000494557 FAM161AQ3B820 660 aa11.03□□□□□ -0.64
RAF1-212ENST00000494557 ZNF692Q9BU19 519 aaPredicted RBP11.03□□□□□ -0.64
RAF1-212ENST00000494557 USP35Q9P2H5 1018 aa11.03□□□□□ -0.64
RAF1-212ENST00000494557 ABCC4O15439 1325 aa11.02□□□□□ -0.64
RAF1-212ENST00000494557 TTC21AQ8NDW8 1320 aa11.02□□□□□ -0.64
RAF1-212ENST00000494557 CCDC146Q8IYE0 955 aa11.02□□□□□ -0.64
RAF1-212ENST00000494557 ABCA3Q99758 1704 aa11.02□□□□□ -0.65
RAF1-212ENST00000494557 LAMB4A4D0S4 1761 aa11.02□□□□□ -0.65
RAF1-212ENST00000494557 HDGFL2Q7Z4V5 671 aaPredicted RBP11.01□□□□□ -0.65
RAF1-212ENST00000494557 TBX22Q9Y458 520 aa11.01□□□□□ -0.65
RAF1-212ENST00000494557 MVPQ14764 893 aaKnown RBP11.01□□□□□ -0.65
RAF1-212ENST00000494557 IGHDP01880 384 aa11.01□□□□□ -0.65
RAF1-212ENST00000494557 CYB5RLQ6IPT4 315 aa11.01□□□□□ -0.65
RAF1-212ENST00000494557 UBR2Q8IWV8 1755 aa11□□□□□ -0.65
RAF1-212ENST00000494557 HDGFP51858 240 aaKnown RBP11□□□□□ -0.65
RAF1-212ENST00000494557 SMC5Q8IY18 1101 aa11□□□□□ -0.65
RAF1-212ENST00000494557 PMFBP1Q8TBY8 1022 aa11□□□□□ -0.65
RAF1-212ENST00000494557 IFT57Q9NWB7 429 aa11□□□□□ -0.65
RAF1-212ENST00000494557 ADGRL3Q9HAR2 1447 aa11□□□□□ -0.65
RAF1-212ENST00000494557 RLBP1P12271 317 aa10.99□□□□□ -0.65
RAF1-212ENST00000494557 SOS1Q07889 1333 aaPredicted RBP10.99□□□□□ -0.65
RAF1-212ENST00000494557 ATP10DQ9P241 1426 aa10.99□□□□□ -0.65
RAF1-212ENST00000494557 TTC21BQ7Z4L5 1316 aa10.99□□□□□ -0.65
RAF1-212ENST00000494557 PAK3O75914 559 aaPredicted RBP10.99□□□□□ -0.65
RAF1-212ENST00000494557 CCDC61Q9Y6R9 512 aa10.98□□□□□ -0.65
RAF1-212ENST00000494557 SHANK3Q9BYB0 1731 aa10.98□□□□□ -0.65
RAF1-212ENST00000494557 DIAPH1O60610 1272 aaKnown RBP10.98□□□□□ -0.65
RAF1-212ENST00000494557 ZBTB40Q9NUA8 1239 aa10.98□□□□□ -0.65
RAF1-212ENST00000494557 SBNO1A3KN83 1393 aa10.98□□□□□ -0.65
RAF1-212ENST00000494557 NFE2L2Q16236 605 aa10.97□□□□□ -0.65
RAF1-212ENST00000494557 DDRGK1Q96HY6 314 aa10.97□□□□□ -0.65
RAF1-212ENST00000494557 CABP1Q9NZU7 370 aa10.97□□□□□ -0.65
RAF1-212ENST00000494557 MRC1P22897 1456 aa10.97□□□□□ -0.65
RAF1-212ENST00000494557 ANP32AP39687 249 aaKnown RBP10.96□□□□□ -0.65
RAF1-212ENST00000494557 AEBP2Q6ZN18 517 aaPredicted RBP10.96□□□□□ -0.65
RAF1-212ENST00000494557 RGPD5Q99666 1765 aa10.96□□□□□ -0.65
RAF1-212ENST00000494557 PCDHB15Q9Y5E8 787 aa10.96□□□□□ -0.66
RAF1-212ENST00000494557 NUDT16Q96DE0 195 aaKnown RBP10.96□□□□□ -0.66
RAF1-212ENST00000494557 ARXQ96QS3 562 aa10.96□□□□□ -0.66
RAF1-212ENST00000494557 CICQ96RK0 1608 aaPredicted RBP10.95□□□□□ -0.66
RAF1-212ENST00000494557 MINK1Q8N4C8 1332 aaPredicted RBP10.95□□□□□ -0.66
RAF1-212ENST00000494557 WNK3Q9BYP7 1800 aa10.95□□□□□ -0.66
RAF1-212ENST00000494557 CALD1Q05682 793 aaKnown RBP10.94□□□□□ -0.66
RAF1-212ENST00000494557 ATF7IPQ6VMQ6 1270 aa10.94□□□□□ -0.66
RAF1-212ENST00000494557 AK9Q5TCS8 1911 aa10.94□□□□□ -0.66
RAF1-212ENST00000494557 IGSF1Q8N6C5 1336 aa10.94□□□□□ -0.66
RAF1-212ENST00000494557 TRIM27P14373 513 aa10.94□□□□□ -0.66
RAF1-212ENST00000494557 LTKP29376 864 aa10.94□□□□□ -0.66
RAF1-212ENST00000494557 ZKSCAN2Q63HK3 967 aa10.94□□□□□ -0.66
RAF1-212ENST00000494557 BABAM1Q9NWV8 329 aa10.94□□□□□ -0.66
RAF1-212ENST00000494557 C5P01031 1676 aa10.94□□□□□ -0.66
RAF1-212ENST00000494557 IL17RAQ96F46 866 aa10.94□□□□□ -0.66
RAF1-212ENST00000494557 DCCP43146 1447 aa10.93□□□□□ -0.66
RAF1-212ENST00000494557 CHGAP10645 457 aaKnown RBP10.93□□□□□ -0.66
RAF1-212ENST00000494557 SRPK2P78362 688 aaKnown RBP10.93□□□□□ -0.66
RAF1-212ENST00000494557 MRPL50Q8N5N7 158 aaKnown RBP10.93□□□□□ -0.66
RAF1-212ENST00000494557 GGNBP2Q9H3C7 697 aa10.93□□□□□ -0.66
RAF1-212ENST00000494557 NUP188Q5SRE5 1749 aa10.93□□□□□ -0.66
RAF1-212ENST00000494557 CFAP44Q96MT7 982 aa10.93□□□□□ -0.66
RAF1-212ENST00000494557 DDX19BQ9UMR2 479 aa10.93□□□□□ -0.66
RAF1-212ENST00000494557 FLT4P35916 1363 aa10.92□□□□□ -0.66
RAF1-212ENST00000494557 VAMP4O75379 141 aa10.92□□□□□ -0.66
RAF1-212ENST00000494557 DDIT3P35638 169 aa10.92□□□□□ -0.66
RAF1-212ENST00000494557 WAPLQ7Z5K2 1190 aa10.92□□□□□ -0.66
RAF1-212ENST00000494557 SSH1Q8WYL5 1049 aa10.92□□□□□ -0.66
RAF1-212ENST00000494557 HTATSF1O43719 755 aaKnown RBP10.92□□□□□ -0.66
RAF1-212ENST00000494557 PLCH1Q4KWH8 1693 aa10.91□□□□□ -0.66
RAF1-212ENST00000494557 DZIP1LQ8IYY4 767 aaKnown RBP10.91□□□□□ -0.66
RAF1-212ENST00000494557 ANTXR1Q9H6X2 564 aa10.91□□□□□ -0.66
RAF1-212ENST00000494557 POGKQ9P215 609 aa10.91□□□□□ -0.66
RAF1-212ENST00000494557 CEMIPQ8WUJ3 1361 aa10.91□□□□□ -0.66
RAF1-212ENST00000494557 LMOD3Q0VAK6 560 aa10.91□□□□□ -0.66
RAF1-212ENST00000494557 TBC1D32Q96NH3 1257 aa10.91□□□□□ -0.66
RAF1-212ENST00000494557 U2AF1L5P0DN76 240 aaPredicted RBP10.9□□□□□ -0.66
RAF1-212ENST00000494557 U2AF1Q01081 240 aaKnown RBP eCLIP10.9□□□□□ -0.66
RAF1-212ENST00000494557 PANK1Q8TE04 598 aa10.9□□□□□ -0.66
RAF1-212ENST00000494557 CHL1O00533 1208 aa10.9□□□□□ -0.67
RAF1-212ENST00000494557 ZBTB7BO15156 539 aaPredicted RBP10.9□□□□□ -0.67
RAF1-212ENST00000494557 NUCB1Q02818 461 aa10.9□□□□□ -0.67
RAF1-212ENST00000494557 DDX60Q8IY21 1712 aaKnown RBP10.89□□□□□ -0.67
RAF1-212ENST00000494557 PODXL2Q9NZ53 605 aa10.89□□□□□ -0.67
RAF1-212ENST00000494557 MSH6P52701 1360 aa10.89□□□□□ -0.67
RAF1-212ENST00000494557 TULP1O00294 542 aaPredicted RBP10.89□□□□□ -0.67
RAF1-212ENST00000494557 GNAI1P63096 354 aa10.89□□□□□ -0.67
RAF1-212ENST00000494557 EXOSC9Q06265 439 aaKnown RBP10.89□□□□□ -0.67
RAF1-212ENST00000494557 INTS3Q68E01 1043 aaKnown RBP10.89□□□□□ -0.67
RAF1-212ENST00000494557 HEG1Q9ULI3 1381 aa10.88□□□□□ -0.67
RAF1-212ENST00000494557 PHACTR3Q96KR7 559 aa10.88□□□□□ -0.67
RAF1-212ENST00000494557 RBM25P49756 843 aaKnown RBP10.88□□□□□ -0.67
RAF1-212ENST00000494557 RWDD1Q9H446 243 aaPredicted RBP10.88□□□□□ -0.67
RAF1-212ENST00000494557 NUTM2DQ5VT03 806 aaPredicted RBP10.88□□□□□ -0.67
RAF1-212ENST00000494557 NHSL1Q5SYE7 1610 aa10.87□□□□□ -0.67
RAF1-212ENST00000494557 RIPK4P57078 832 aa10.87□□□□□ -0.67
RAF1-212ENST00000494557 TNNQ9UQP3 1299 aa10.87□□□□□ -0.67
RAF1-212ENST00000494557 SALL2Q9Y467 1007 aaPredicted RBP10.87□□□□□ -0.67
RAF1-212ENST00000494557 ACEP12821 1306 aa10.87□□□□□ -0.67
RAF1-212ENST00000494557 NME9Q86XW9 330 aa10.87□□□□□ -0.67
RAF1-212ENST00000494557 CHMP4BQ9H444 224 aaKnown RBP10.87□□□□□ -0.67
RAF1-212ENST00000494557 PPM1GO15355 546 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms