RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 PNNQ9H307 717 aaKnown RBP8.99□□□□□ -0.97
MSH5-217ENST00000494458 SPDYE2BA6NHP3 402 aa8.98□□□□□ -0.97
MSH5-217ENST00000494458 SPDYE6P0CI01 402 aa8.98□□□□□ -0.97
MSH5-217ENST00000494458 SPDYE2Q495Y8 402 aa8.98□□□□□ -0.97
MSH5-217ENST00000494458 CADPS2Q86UW7 1296 aa8.98□□□□□ -0.97
MSH5-217ENST00000494458 CDCA7LQ96GN5 454 aa8.98□□□□□ -0.97
MSH5-217ENST00000494458 ORAI2Q96SN7 254 aa8.98□□□□□ -0.97
MSH5-217ENST00000494458 SUPT16HQ9Y5B9 1047 aaKnown RBP8.98□□□□□ -0.97
MSH5-217ENST00000494458 XIRP1Q702N8 1843 aaKnown RBP8.97□□□□□ -0.97
MSH5-217ENST00000494458 U2AF1L5P0DN76 240 aaPredicted RBP8.97□□□□□ -0.97
MSH5-217ENST00000494458 U2AF1Q01081 240 aaKnown RBP eCLIP8.97□□□□□ -0.97
MSH5-217ENST00000494458 GOLGA2Q08379 1002 aa8.97□□□□□ -0.97
MSH5-217ENST00000494458 ESCO1Q5FWF5 840 aa8.97□□□□□ -0.97
MSH5-217ENST00000494458 CCDC146Q8IYE0 955 aa8.97□□□□□ -0.97
MSH5-217ENST00000494458 USP19O94966 1318 aa8.97□□□□□ -0.97
MSH5-217ENST00000494458 KIF1AQ12756 1690 aa8.97□□□□□ -0.97
MSH5-217ENST00000494458 SBNO1A3KN83 1393 aa8.97□□□□□ -0.97
MSH5-217ENST00000494458 SLIT3O75094 1523 aa8.96□□□□□ -0.97
MSH5-217ENST00000494458 PHRF1Q9P1Y6 1649 aaKnown RBP8.96□□□□□ -0.98
MSH5-217ENST00000494458 E9PSI1 815 aa8.96□□□□□ -0.98
MSH5-217ENST00000494458 TMPOP42166 694 aaKnown RBP8.96□□□□□ -0.98
MSH5-217ENST00000494458 RRS1Q15050 365 aaKnown RBP8.96□□□□□ -0.98
MSH5-217ENST00000494458 TRIM35Q9UPQ4 493 aa8.96□□□□□ -0.98
MSH5-217ENST00000494458 IL16Q14005 1332 aa8.96□□□□□ -0.98
MSH5-217ENST00000494458 MAP3K19Q56UN5 1328 aa8.96□□□□□ -0.98
MSH5-217ENST00000494458 RGPD1P0DJD0 1748 aa8.96□□□□□ -0.98
MSH5-217ENST00000494458 PEAK1Q9H792 1746 aa8.96□□□□□ -0.98
MSH5-217ENST00000494458 TRPM3Q9HCF6 1732 aaPredicted RBP8.96□□□□□ -0.98
MSH5-217ENST00000494458 KDRP35968 1356 aa8.96□□□□□ -0.98
MSH5-217ENST00000494458 NFAT5O94916 1531 aa8.95□□□□□ -0.98
MSH5-217ENST00000494458 ATF3P18847 181 aa8.95□□□□□ -0.98
MSH5-217ENST00000494458 NLRP6P59044 892 aa8.95□□□□□ -0.98
MSH5-217ENST00000494458 PSME1Q06323 249 aa8.95□□□□□ -0.98
MSH5-217ENST00000494458 EIF4A2Q14240 407 aaKnown RBP8.95□□□□□ -0.98
MSH5-217ENST00000494458 ABTB2Q8N961 1025 aa8.95□□□□□ -0.98
MSH5-217ENST00000494458 RTL1A6NKG5 1358 aa8.95□□□□□ -0.98
MSH5-217ENST00000494458 FLT4P35916 1363 aa8.95□□□□□ -0.98
MSH5-217ENST00000494458 FOXO3O43524 673 aa8.94□□□□□ -0.98
MSH5-217ENST00000494458 HSP90AB2PQ58FF8 381 aa8.94□□□□□ -0.98
MSH5-217ENST00000494458 KRT28Q7Z3Y7 464 aa8.94□□□□□ -0.98
MSH5-217ENST00000494458 KCNH5Q8NCM2 988 aa8.94□□□□□ -0.98
MSH5-217ENST00000494458 ZNF335Q9H4Z2 1342 aaPredicted RBP8.94□□□□□ -0.98
MSH5-217ENST00000494458 MSH6P52701 1360 aa8.94□□□□□ -0.98
MSH5-217ENST00000494458 ARHGEF25Q86VW2 580 aa8.93□□□□□ -0.98
MSH5-217ENST00000494458 SPDYE1Q8NFV5 336 aaPredicted RBP8.93□□□□□ -0.98
MSH5-217ENST00000494458 IP6K1Q92551 441 aa8.93□□□□□ -0.98
MSH5-217ENST00000494458 RCAN3Q9UKA8 241 aa8.93□□□□□ -0.98
MSH5-217ENST00000494458 IGSF1Q8N6C5 1336 aa8.93□□□□□ -0.98
MSH5-217ENST00000494458 ARHGEF10O15013 1369 aa8.93□□□□□ -0.98
MSH5-217ENST00000494458 ALS2Q96Q42 1657 aa8.93□□□□□ -0.98
MSH5-217ENST00000494458 PXDNQ92626 1479 aa8.92□□□□□ -0.98
MSH5-217ENST00000494458 NCAPD2Q15021 1401 aa8.92□□□□□ -0.98
MSH5-217ENST00000494458 U2SURPO15042 1029 aaKnown RBP8.92□□□□□ -0.98
MSH5-217ENST00000494458 HOXC9P31274 260 aa8.92□□□□□ -0.98
MSH5-217ENST00000494458 NFE2L2Q16236 605 aa8.92□□□□□ -0.98
MSH5-217ENST00000494458 C14orf37Q86TY3 774 aa8.92□□□□□ -0.98
MSH5-217ENST00000494458 PHACTR3Q96KR7 559 aa8.92□□□□□ -0.98
MSH5-217ENST00000494458 SALL2Q9Y467 1007 aaPredicted RBP8.92□□□□□ -0.98
MSH5-217ENST00000494458 SOS2Q07890 1332 aaPredicted RBP8.91□□□□□ -0.98
MSH5-217ENST00000494458 NPHP3Q7Z494 1330 aa8.91□□□□□ -0.98
MSH5-217ENST00000494458 SENP3-EIF4A1A0A087X0R7 540 aa8.91□□□□□ -0.98
MSH5-217ENST00000494458 GCP02774 474 aa8.91□□□□□ -0.98
MSH5-217ENST00000494458 CT47B1P0C2W7 299 aaPredicted RBP8.91□□□□□ -0.98
MSH5-217ENST00000494458 ZNF853P0CG23 659 aa8.91□□□□□ -0.98
MSH5-217ENST00000494458 POTEIP0CG38 1075 aa8.91□□□□□ -0.98
MSH5-217ENST00000494458 PRKAR2BP31323 418 aa8.91□□□□□ -0.98
MSH5-217ENST00000494458 FKBP8Q14318 412 aa8.91□□□□□ -0.98
MSH5-217ENST00000494458 BRINP3Q76B58 766 aa8.91□□□□□ -0.98
MSH5-217ENST00000494458 SLAIN2Q9P270 581 aa8.91□□□□□ -0.98
MSH5-217ENST00000494458 SPATA31A3Q5VYP0 1347 aa8.9□□□□□ -0.98
MSH5-217ENST00000494458 PPM1GO15355 546 aaPredicted RBP8.9□□□□□ -0.98
MSH5-217ENST00000494458 EYA1Q99502 592 aa8.9□□□□□ -0.98
MSH5-217ENST00000494458 CLEC11AQ9Y240 323 aa8.9□□□□□ -0.98
MSH5-217ENST00000494458 LTBP4Q8N2S1 1624 aa8.9□□□□□ -0.99
MSH5-217ENST00000494458 MED1Q15648 1581 aaPredicted RBP8.9□□□□□ -0.99
MSH5-217ENST00000494458 RRP1P56182 461 aaKnown RBP8.89□□□□□ -0.99
MSH5-217ENST00000494458 RIPK4P57078 832 aa8.89□□□□□ -0.99
MSH5-217ENST00000494458 RRP7AQ9Y3A4 280 aaKnown RBP8.89□□□□□ -0.99
MSH5-217ENST00000494458 ABCC6O95255 1503 aa8.89□□□□□ -0.99
MSH5-217ENST00000494458 TNS3Q68CZ2 1445 aa8.88□□□□□ -0.99
MSH5-217ENST00000494458 CPDO75976 1380 aa8.88□□□□□ -0.99
MSH5-217ENST00000494458 PLEKHG2Q9H7P9 1386 aa8.88□□□□□ -0.99
MSH5-217ENST00000494458 MAPK8IP3Q9UPT6 1336 aa8.88□□□□□ -0.99
MSH5-217ENST00000494458 PAK3O75914 559 aaPredicted RBP8.88□□□□□ -0.99
MSH5-217ENST00000494458 NEFLP07196 543 aa8.88□□□□□ -0.99
MSH5-217ENST00000494458 HMOX1P09601 288 aa8.88□□□□□ -0.99
MSH5-217ENST00000494458 AMPHP49418 695 aa8.88□□□□□ -0.99
MSH5-217ENST00000494458 SULT6B1Q6IMI4 303 aa8.88□□□□□ -0.99
MSH5-217ENST00000494458 HTATSF1O43719 755 aaKnown RBP8.87□□□□□ -0.99
MSH5-217ENST00000494458 BRPF1P55201 1214 aaPredicted RBP8.87□□□□□ -0.99
MSH5-217ENST00000494458 NUTM2GQ5VZR2 741 aa8.87□□□□□ -0.99
MSH5-217ENST00000494458 AEBP1Q8IUX7 1158 aa8.87□□□□□ -0.99
MSH5-217ENST00000494458 MYH16Q9H6N6 1097 aa8.87□□□□□ -0.99
MSH5-217ENST00000494458 CRYBG1Q9Y4K1 1723 aa8.86□□□□□ -0.99
MSH5-217ENST00000494458 CALD1Q05682 793 aaKnown RBP8.86□□□□□ -0.99
MSH5-217ENST00000494458 LMOD3Q0VAK6 560 aa8.86□□□□□ -0.99
MSH5-217ENST00000494458 ZNF428Q96B54 188 aa8.86□□□□□ -0.99
MSH5-217ENST00000494458 PPP4R2Q9NY27 417 aa8.86□□□□□ -0.99
MSH5-217ENST00000494458 COL18A1P39060 1754 aa8.86□□□□□ -0.99
MSH5-217ENST00000494458 LMO7Q8WWI1 1683 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms