RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 ALG2Q9H553 416 aa11.72□□□□□ -0.53
MSL3-217ENST00000494268 WASF2Q9Y6W5 498 aa11.72□□□□□ -0.53
MSL3-217ENST00000494268 NRG2O14511 850 aaPredicted RBP11.71□□□□□ -0.53
MSL3-217ENST00000494268 SEMA3FQ13275 785 aa11.71□□□□□ -0.53
MSL3-217ENST00000494268 HDGFL1Q5TGJ6 251 aa11.71□□□□□ -0.53
MSL3-217ENST00000494268 CEP126Q9P2H0 1117 aa11.71□□□□□ -0.53
MSL3-217ENST00000494268 FAM187AA6NFU0 413 aa11.7□□□□□ -0.54
MSL3-217ENST00000494268 NR3C2P08235 984 aa11.7□□□□□ -0.54
MSL3-217ENST00000494268 FSHRP23945 695 aa11.7□□□□□ -0.54
MSL3-217ENST00000494268 RAB15P59190 212 aa11.7□□□□□ -0.54
MSL3-217ENST00000494268 HPS1Q92902 700 aa11.7□□□□□ -0.54
MSL3-217ENST00000494268 CDV3Q9UKY7 258 aaKnown RBP11.7□□□□□ -0.54
MSL3-217ENST00000494268 MCCD1P59942 119 aaPredicted RBP11.69□□□□□ -0.54
MSL3-217ENST00000494268 ESPNB1AK53 854 aa11.68□□□□□ -0.54
MSL3-217ENST00000494268 NNTQ13423 1086 aa11.68□□□□□ -0.54
MSL3-217ENST00000494268 NBPF20Q3BBV1 942 aa11.68□□□□□ -0.54
MSL3-217ENST00000494268 SOX11P35716 441 aa11.67□□□□□ -0.54
MSL3-217ENST00000494268 NR5A1Q13285 461 aa11.67□□□□□ -0.54
MSL3-217ENST00000494268 INTS6LQ5JSJ4 861 aaKnown RBP11.67□□□□□ -0.54
MSL3-217ENST00000494268 ERICH6Q7L0X2 663 aa11.66□□□□□ -0.54
MSL3-217ENST00000494268 GLMNQ92990 594 aa11.66□□□□□ -0.54
MSL3-217ENST00000494268 LAPTM4AQ15012 233 aa11.65□□□□□ -0.54
MSL3-217ENST00000494268 TSGA10IPQ3SY00 556 aa11.65□□□□□ -0.54
MSL3-217ENST00000494268 ARID3CA6NKF2 412 aa11.64□□□□□ -0.55
MSL3-217ENST00000494268 PKDCCQ504Y2 493 aa11.64□□□□□ -0.55
MSL3-217ENST00000494268 PHTF2Q8N3S3 785 aa11.64□□□□□ -0.55
MSL3-217ENST00000494268 ZNF592Q92610 1267 aa11.64□□□□□ -0.55
MSL3-217ENST00000494268 PIK3CDO00329 1044 aa11.63□□□□□ -0.55
MSL3-217ENST00000494268 DGAT1O75907 488 aa11.63□□□□□ -0.55
MSL3-217ENST00000494268 CCDC116Q8IYX3 515 aa11.63□□□□□ -0.55
MSL3-217ENST00000494268 KLF16Q9BXK1 252 aaPredicted RBP11.63□□□□□ -0.55
MSL3-217ENST00000494268 TMPRSS4Q9NRS4 437 aa11.63□□□□□ -0.55
MSL3-217ENST00000494268 ERVH48-1M5A8F1 160 aa11.62□□□□□ -0.55
MSL3-217ENST00000494268 PPP1R26Q5T8A7 1209 aaPredicted RBP11.62□□□□□ -0.55
MSL3-217ENST00000494268 CALR3Q96L12 384 aaKnown RBP11.62□□□□□ -0.55
MSL3-217ENST00000494268 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
MSL3-217ENST00000494268 CCDC85AQ96PX6 553 aaPredicted RBP11.61□□□□□ -0.55
MSL3-217ENST00000494268 SEPT12Q8IYM1 358 aa11.6□□□□□ -0.55
MSL3-217ENST00000494268 ITPKCQ96DU7 683 aa11.6□□□□□ -0.55
MSL3-217ENST00000494268 UCN2Q96RP3 112 aa11.6□□□□□ -0.55
MSL3-217ENST00000494268 SUPT5HO00267 1087 aaKnown RBP11.59□□□□□ -0.55
MSL3-217ENST00000494268 AVPP01185 164 aa11.59□□□□□ -0.55
MSL3-217ENST00000494268 WDR4P57081 412 aaKnown RBP11.59□□□□□ -0.55
MSL3-217ENST00000494268 RNF20Q5VTR2 975 aa11.59□□□□□ -0.55
MSL3-217ENST00000494268 RNF135Q8IUD6 432 aa11.59□□□□□ -0.55
MSL3-217ENST00000494268 ZFAND3Q9H8U3 227 aa11.59□□□□□ -0.55
MSL3-217ENST00000494268 ZIC2O95409 532 aaPredicted RBP11.58□□□□□ -0.56
MSL3-217ENST00000494268 TIMP2P16035 220 aa11.58□□□□□ -0.56
MSL3-217ENST00000494268 CDCA7Q9BWT1 371 aaPredicted RBP11.58□□□□□ -0.56
MSL3-217ENST00000494268 MYT1Q01538 1121 aa11.57□□□□□ -0.56
MSL3-217ENST00000494268 DHX9Q08211 1270 aaKnown RBP11.57□□□□□ -0.56
MSL3-217ENST00000494268 Q6ZNB5 142 aa11.57□□□□□ -0.56
MSL3-217ENST00000494268 C1orf115Q9H7X2 142 aa11.57□□□□□ -0.56
MSL3-217ENST00000494268 PCDHB11Q9Y5F2 797 aa11.57□□□□□ -0.56
MSL3-217ENST00000494268 EMILIN1Q9Y6C2 1016 aa11.57□□□□□ -0.56
MSL3-217ENST00000494268 TBC1D9Q6ZT07 1266 aa11.56□□□□□ -0.56
MSL3-217ENST00000494268 ZNF784Q8NCA9 323 aaPredicted RBP11.56□□□□□ -0.56
MSL3-217ENST00000494268 CHIC2Q9UKJ5 165 aa11.56□□□□□ -0.56
MSL3-217ENST00000494268 ST8SIA5O15466 376 aa11.55□□□□□ -0.56
MSL3-217ENST00000494268 CAPN5O15484 640 aaPredicted RBP11.55□□□□□ -0.56
MSL3-217ENST00000494268 SKIP12755 728 aa11.55□□□□□ -0.56
MSL3-217ENST00000494268 LCE2BO14633 110 aa11.54□□□□□ -0.56
MSL3-217ENST00000494268 LILRA1O75019 489 aa11.54□□□□□ -0.56
MSL3-217ENST00000494268 SCTRP47872 440 aa11.54□□□□□ -0.56
MSL3-217ENST00000494268 CBLBQ13191 982 aa11.54□□□□□ -0.56
MSL3-217ENST00000494268 PLPP7Q8NBV4 271 aa11.54□□□□□ -0.56
MSL3-217ENST00000494268 CYLDQ9NQC7 956 aa11.54□□□□□ -0.56
MSL3-217ENST00000494268 PGPEP1Q9NXJ5 209 aa11.54□□□□□ -0.56
MSL3-217ENST00000494268 ADD1P35611 737 aaKnown RBP11.53□□□□□ -0.56
MSL3-217ENST00000494268 TRAF7Q6Q0C0 670 aa11.53□□□□□ -0.56
MSL3-217ENST00000494268 TFIP11Q9UBB9 837 aaKnown RBP11.53□□□□□ -0.56
MSL3-217ENST00000494268 AXIN1O15169 862 aa11.52□□□□□ -0.57
MSL3-217ENST00000494268 AAASQ9NRG9 546 aa11.52□□□□□ -0.57
MSL3-217ENST00000494268 DACH1Q9UI36 760 aa11.52□□□□□ -0.57
MSL3-217ENST00000494268 DOLKQ9UPQ8 538 aa11.52□□□□□ -0.57
MSL3-217ENST00000494268 SMCPP49901 116 aaPredicted RBP11.51□□□□□ -0.57
MSL3-217ENST00000494268 CCDC125Q86Z20 511 aa11.51□□□□□ -0.57
MSL3-217ENST00000494268 DEPDC4Q8N2C3 294 aa11.51□□□□□ -0.57
MSL3-217ENST00000494268 PPP1R12CQ9BZL4 782 aa11.51□□□□□ -0.57
MSL3-217ENST00000494268 PALM3A6NDB9 673 aaPredicted RBP11.5□□□□□ -0.57
MSL3-217ENST00000494268 CTC1Q2NKJ3 1217 aa11.5□□□□□ -0.57
MSL3-217ENST00000494268 OXLD1Q5BKU9 147 aa11.5□□□□□ -0.57
MSL3-217ENST00000494268 CRIPAKQ8N1N5 446 aa11.5□□□□□ -0.57
MSL3-217ENST00000494268 NFATC2IPQ8NCF5 419 aa11.5□□□□□ -0.57
MSL3-217ENST00000494268 ATP9BO43861 1147 aa11.49□□□□□ -0.57
MSL3-217ENST00000494268 ERVK-9P63128 1117 aa11.49□□□□□ -0.57
MSL3-217ENST00000494268 MAP7D1Q3KQU3 841 aa11.49□□□□□ -0.57
MSL3-217ENST00000494268 USP17L5A8MUK1 530 aa11.48□□□□□ -0.57
MSL3-217ENST00000494268 CC2D2BQ6DHV5 1058 aa11.48□□□□□ -0.57
MSL3-217ENST00000494268 Q6ZVU0 165 aa11.48□□□□□ -0.57
MSL3-217ENST00000494268 BMP1P13497 986 aa11.47□□□□□ -0.57
MSL3-217ENST00000494268 NCOA4Q13772 614 aa11.47□□□□□ -0.57
MSL3-217ENST00000494268 AGBL1Q96MI9 1066 aa11.47□□□□□ -0.57
MSL3-217ENST00000494268 USP4Q13107 963 aa11.46□□□□□ -0.57
MSL3-217ENST00000494268 KDF1Q8NAX2 398 aaPredicted RBP11.46□□□□□ -0.57
MSL3-217ENST00000494268 OSBPL3Q9H4L5 887 aa11.46□□□□□ -0.57
MSL3-217ENST00000494268 MAFBQ9Y5Q3 323 aaPredicted RBP11.46□□□□□ -0.57
MSL3-217ENST00000494268 USP17L3A6NCW0 530 aa11.45□□□□□ -0.58
MSL3-217ENST00000494268 USP17L4A6NCW7 530 aa11.45□□□□□ -0.58
MSL3-217ENST00000494268 CFAP70Q5T0N1 1121 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms