RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 SMPD1P17405 629 aa14.67□□□□□ -0.06
HMGB3P14-201ENST00000494195 GRM5P41594 1212 aa14.67□□□□□ -0.06
HMGB3P14-201ENST00000494195 KCTD15Q96SI1 283 aaPredicted RBP14.66□□□□□ -0.06
HMGB3P14-201ENST00000494195 TRAK2O60296 914 aa14.65□□□□□ -0.06
HMGB3P14-201ENST00000494195 NR5A1Q13285 461 aa14.65□□□□□ -0.06
HMGB3P14-201ENST00000494195 POM121CA8CG34 1229 aa14.64□□□□□ -0.07
HMGB3P14-201ENST00000494195 FSHRP23945 695 aa14.64□□□□□ -0.07
HMGB3P14-201ENST00000494195 FAM187AA6NFU0 413 aa14.63□□□□□ -0.07
HMGB3P14-201ENST00000494195 SEMA3FQ13275 785 aa14.63□□□□□ -0.07
HMGB3P14-201ENST00000494195 ESPNB1AK53 854 aa14.61□□□□□ -0.07
HMGB3P14-201ENST00000494195 DGAT1O75907 488 aa14.61□□□□□ -0.07
HMGB3P14-201ENST00000494195 NNTQ13423 1086 aa14.61□□□□□ -0.07
HMGB3P14-201ENST00000494195 ALG2Q9H553 416 aa14.61□□□□□ -0.07
HMGB3P14-201ENST00000494195 PKDCCQ504Y2 493 aa14.6□□□□□ -0.07
HMGB3P14-201ENST00000494195 INTS6LQ5JSJ4 861 aaKnown RBP14.6□□□□□ -0.07
HMGB3P14-201ENST00000494195 CEP126Q9P2H0 1117 aa14.6□□□□□ -0.07
HMGB3P14-201ENST00000494195 GIGYF1O75420 1035 aaPredicted RBP14.59□□□□□ -0.07
HMGB3P14-201ENST00000494195 SEPT12Q8IYM1 358 aa14.59□□□□□ -0.07
HMGB3P14-201ENST00000494195 TIMELESSQ9UNS1 1208 aa14.58□□□□□ -0.08
HMGB3P14-201ENST00000494195 NR3C2P08235 984 aa14.57□□□□□ -0.08
HMGB3P14-201ENST00000494195 RNF20Q5VTR2 975 aa14.57□□□□□ -0.08
HMGB3P14-201ENST00000494195 CCDC116Q8IYX3 515 aa14.57□□□□□ -0.08
HMGB3P14-201ENST00000494195 HPS1Q92902 700 aa14.57□□□□□ -0.08
HMGB3P14-201ENST00000494195 DHX9Q08211 1270 aaKnown RBP14.56□□□□□ -0.08
HMGB3P14-201ENST00000494195 ADAMTS19Q8TE59 1207 aa14.56□□□□□ -0.08
HMGB3P14-201ENST00000494195 AVPP01185 164 aa14.55□□□□□ -0.08
HMGB3P14-201ENST00000494195 HDGFL1Q5TGJ6 251 aa14.55□□□□□ -0.08
HMGB3P14-201ENST00000494195 CCDC125Q86Z20 511 aa14.55□□□□□ -0.08
HMGB3P14-201ENST00000494195 RAB15P59190 212 aa14.54□□□□□ -0.08
HMGB3P14-201ENST00000494195 GLMNQ92990 594 aa14.54□□□□□ -0.08
HMGB3P14-201ENST00000494195 SLFNL1Q499Z3 407 aa14.53□□□□□ -0.08
HMGB3P14-201ENST00000494195 ZNF777Q9ULD5 760 aaPredicted RBP14.53□□□□□ -0.08
HMGB3P14-201ENST00000494195 EMILIN1Q9Y6C2 1016 aa14.53□□□□□ -0.08
HMGB3P14-201ENST00000494195 PPP1R26Q5T8A7 1209 aaPredicted RBP14.51□□□□□ -0.09
HMGB3P14-201ENST00000494195 PHTF2Q8N3S3 785 aa14.51□□□□□ -0.09
HMGB3P14-201ENST00000494195 ERVH48-1M5A8F1 160 aa14.5□□□□□ -0.09
HMGB3P14-201ENST00000494195 WDR4P57081 412 aaKnown RBP14.5□□□□□ -0.09
HMGB3P14-201ENST00000494195 RNF135Q8IUD6 432 aa14.5□□□□□ -0.09
HMGB3P14-201ENST00000494195 CALR3Q96L12 384 aaKnown RBP14.5□□□□□ -0.09
HMGB3P14-201ENST00000494195 KLF16Q9BXK1 252 aaPredicted RBP14.5□□□□□ -0.09
HMGB3P14-201ENST00000494195 CTC1Q2NKJ3 1217 aa14.49□□□□□ -0.09
HMGB3P14-201ENST00000494195 PGPEP1Q9NXJ5 209 aa14.49□□□□□ -0.09
HMGB3P14-201ENST00000494195 TIMP2P16035 220 aa14.48□□□□□ -0.09
HMGB3P14-201ENST00000494195 ZIC2O95409 532 aaPredicted RBP14.47□□□□□ -0.09
HMGB3P14-201ENST00000494195 SMCPP49901 116 aaPredicted RBP14.47□□□□□ -0.09
HMGB3P14-201ENST00000494195 Q6ZNB5 142 aa14.47□□□□□ -0.09
HMGB3P14-201ENST00000494195 ITPKCQ96DU7 683 aa14.47□□□□□ -0.09
HMGB3P14-201ENST00000494195 MYT1Q01538 1121 aa14.46□□□□□ -0.09
HMGB3P14-201ENST00000494195 CRIPAKQ8N1N5 446 aa14.46□□□□□ -0.09
HMGB3P14-201ENST00000494195 TRIM52Q96A61 297 aa14.46□□□□□ -0.09
HMGB3P14-201ENST00000494195 CCDC85AQ96PX6 553 aaPredicted RBP14.46□□□□□ -0.09
HMGB3P14-201ENST00000494195 TMPRSS4Q9NRS4 437 aa14.46□□□□□ -0.09
HMGB3P14-201ENST00000494195 CHIC2Q9UKJ5 165 aa14.46□□□□□ -0.09
HMGB3P14-201ENST00000494195 NFATC2IPQ8NCF5 419 aa14.45□□□□□ -0.1
HMGB3P14-201ENST00000494195 ZFAND3Q9H8U3 227 aa14.45□□□□□ -0.1
HMGB3P14-201ENST00000494195 PCDHB11Q9Y5F2 797 aa14.45□□□□□ -0.1
HMGB3P14-201ENST00000494195 PIK3CDO00329 1044 aa14.44□□□□□ -0.1
HMGB3P14-201ENST00000494195 CAPN5O15484 640 aaPredicted RBP14.44□□□□□ -0.1
HMGB3P14-201ENST00000494195 ZNF784Q8NCA9 323 aaPredicted RBP14.44□□□□□ -0.1
HMGB3P14-201ENST00000494195 UCN2Q96RP3 112 aa14.44□□□□□ -0.1
HMGB3P14-201ENST00000494195 AXIN1O15169 862 aa14.42□□□□□ -0.1
HMGB3P14-201ENST00000494195 MAP7D1Q3KQU3 841 aa14.42□□□□□ -0.1
HMGB3P14-201ENST00000494195 PLPP7Q8NBV4 271 aa14.42□□□□□ -0.1
HMGB3P14-201ENST00000494195 DOLKQ9UPQ8 538 aa14.42□□□□□ -0.1
HMGB3P14-201ENST00000494195 AAASQ9NRG9 546 aa14.41□□□□□ -0.1
HMGB3P14-201ENST00000494195 SKIP12755 728 aa14.4□□□□□ -0.1
HMGB3P14-201ENST00000494195 TSGA10IPQ3SY00 556 aa14.4□□□□□ -0.1
HMGB3P14-201ENST00000494195 ARID3CA6NKF2 412 aa14.39□□□□□ -0.11
HMGB3P14-201ENST00000494195 ST8SIA5O15466 376 aa14.39□□□□□ -0.11
HMGB3P14-201ENST00000494195 LILRA1O75019 489 aa14.39□□□□□ -0.11
HMGB3P14-201ENST00000494195 ERVK-9P63128 1117 aa14.39□□□□□ -0.11
HMGB3P14-201ENST00000494195 TRAF7Q6Q0C0 670 aa14.39□□□□□ -0.11
HMGB3P14-201ENST00000494195 CYLDQ9NQC7 956 aa14.39□□□□□ -0.11
HMGB3P14-201ENST00000494195 CC2D2BQ6DHV5 1058 aa14.38□□□□□ -0.11
HMGB3P14-201ENST00000494195 TBC1D9Q6ZT07 1266 aa14.38□□□□□ -0.11
HMGB3P14-201ENST00000494195 CDCA7Q9BWT1 371 aaPredicted RBP14.38□□□□□ -0.11
HMGB3P14-201ENST00000494195 Q6ZVU0 165 aa14.37□□□□□ -0.11
HMGB3P14-201ENST00000494195 ATP9BO43861 1147 aa14.36□□□□□ -0.11
HMGB3P14-201ENST00000494195 CBLBQ13191 982 aa14.36□□□□□ -0.11
HMGB3P14-201ENST00000494195 MEIOBQ8N635 442 aa14.36□□□□□ -0.11
HMGB3P14-201ENST00000494195 USP17L5A8MUK1 530 aa14.35□□□□□ -0.11
HMGB3P14-201ENST00000494195 LCE2BO14633 110 aa14.35□□□□□ -0.11
HMGB3P14-201ENST00000494195 LZTS3O60299 673 aaPredicted RBP14.35□□□□□ -0.11
HMGB3P14-201ENST00000494195 SCTRP47872 440 aa14.35□□□□□ -0.11
HMGB3P14-201ENST00000494195 OXLD1Q5BKU9 147 aa14.35□□□□□ -0.11
HMGB3P14-201ENST00000494195 MYCP01106 439 aaPredicted RBP14.34□□□□□ -0.11
HMGB3P14-201ENST00000494195 ADD1P35611 737 aaKnown RBP14.34□□□□□ -0.11
HMGB3P14-201ENST00000494195 USP4Q13107 963 aa14.34□□□□□ -0.11
HMGB3P14-201ENST00000494195 SIRT1Q96EB6 747 aa14.34□□□□□ -0.11
HMGB3P14-201ENST00000494195 PPP1R12CQ9BZL4 782 aa14.34□□□□□ -0.11
HMGB3P14-201ENST00000494195 ESF1Q9H501 851 aaKnown RBP14.34□□□□□ -0.11
HMGB3P14-201ENST00000494195 PALM3A6NDB9 673 aaPredicted RBP14.33□□□□□ -0.12
HMGB3P14-201ENST00000494195 TFIP11Q9UBB9 837 aaKnown RBP14.33□□□□□ -0.12
HMGB3P14-201ENST00000494195 ADH1AP07327 375 aa14.32□□□□□ -0.12
HMGB3P14-201ENST00000494195 PLEKHM2Q8IWE5 1019 aa14.32□□□□□ -0.12
HMGB3P14-201ENST00000494195 EML3Q32P44 896 aa14.31□□□□□ -0.12
HMGB3P14-201ENST00000494195 C1orf115Q9H7X2 142 aa14.31□□□□□ -0.12
HMGB3P14-201ENST00000494195 MAFBQ9Y5Q3 323 aaPredicted RBP14.31□□□□□ -0.12
HMGB3P14-201ENST00000494195 USP17L3A6NCW0 530 aa14.3□□□□□ -0.12
HMGB3P14-201ENST00000494195 USP17L4A6NCW7 530 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms