RNA–Protein interactions for RNA: ENST00000494065.2

DEPDC5-220, Transcript of DEP domain containing 5, humanhuman

TSL 3

Gene DEPDC5, Length 414 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-220ENST00000494065 SPATA31A3Q5VYP0 1347 aa11.68□□□□□ -0.54
DEPDC5-220ENST00000494065 POTEFA5A3E0 1075 aa11.68□□□□□ -0.54
DEPDC5-220ENST00000494065 XPCQ01831 940 aaPredicted RBP11.68□□□□□ -0.54
DEPDC5-220ENST00000494065 TRIM26Q12899 539 aaPredicted RBP11.68□□□□□ -0.54
DEPDC5-220ENST00000494065 TRPC5Q9UL62 973 aaPredicted RBP11.68□□□□□ -0.54
DEPDC5-220ENST00000494065 SEC24BO95487 1268 aa11.67□□□□□ -0.54
DEPDC5-220ENST00000494065 PSME1Q06323 249 aa11.67□□□□□ -0.54
DEPDC5-220ENST00000494065 SAFB2Q14151 953 aaKnown RBP eCLIP11.67□□□□□ -0.54
DEPDC5-220ENST00000494065 FNBP4Q8N3X1 1017 aaPredicted RBP11.67□□□□□ -0.54
DEPDC5-220ENST00000494065 QTRT2Q9H974 415 aaKnown RBP11.67□□□□□ -0.54
DEPDC5-220ENST00000494065 USP21Q9UK80 565 aa11.67□□□□□ -0.54
DEPDC5-220ENST00000494065 TRPM3Q9HCF6 1732 aaPredicted RBP11.66□□□□□ -0.54
DEPDC5-220ENST00000494065 PLCB2Q00722 1185 aa11.66□□□□□ -0.54
DEPDC5-220ENST00000494065 COLQQ9Y215 455 aaPredicted RBP11.66□□□□□ -0.54
DEPDC5-220ENST00000494065 KDM2AQ9Y2K7 1162 aa11.66□□□□□ -0.54
DEPDC5-220ENST00000494065 NWD2Q9ULI1 1742 aa11.66□□□□□ -0.54
DEPDC5-220ENST00000494065 KRT28Q7Z3Y7 464 aa11.65□□□□□ -0.54
DEPDC5-220ENST00000494065 TRAK1Q9UPV9 953 aa11.65□□□□□ -0.54
DEPDC5-220ENST00000494065 ATAD2Q6PL18 1390 aa11.65□□□□□ -0.55
DEPDC5-220ENST00000494065 PLCH1Q4KWH8 1693 aa11.65□□□□□ -0.55
DEPDC5-220ENST00000494065 ATP7BP35670 1465 aa11.64□□□□□ -0.55
DEPDC5-220ENST00000494065 HAP1P54257 671 aaPredicted RBP11.64□□□□□ -0.55
DEPDC5-220ENST00000494065 UPF1Q92900 1129 aaKnown RBP eCLIP11.64□□□□□ -0.55
DEPDC5-220ENST00000494065 PCGF6Q9BYE7 350 aa11.64□□□□□ -0.55
DEPDC5-220ENST00000494065 ALS2Q96Q42 1657 aa11.64□□□□□ -0.55
DEPDC5-220ENST00000494065 SLIT2O94813 1529 aa11.64□□□□□ -0.55
DEPDC5-220ENST00000494065 GPRASP1Q5JY77 1395 aa11.64□□□□□ -0.55
DEPDC5-220ENST00000494065 BCL9LQ86UU0 1499 aa11.63□□□□□ -0.55
DEPDC5-220ENST00000494065 MINK1Q8N4C8 1332 aaPredicted RBP11.63□□□□□ -0.55
DEPDC5-220ENST00000494065 TOPAZ1Q8N9V7 1692 aa11.63□□□□□ -0.55
DEPDC5-220ENST00000494065 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
DEPDC5-220ENST00000494065 WASLO00401 505 aaPredicted RBP11.62□□□□□ -0.55
DEPDC5-220ENST00000494065 HIRIP3Q9BW71 556 aaPredicted RBP11.62□□□□□ -0.55
DEPDC5-220ENST00000494065 PRR36Q9H6K5 1346 aa11.6□□□□□ -0.55
DEPDC5-220ENST00000494065 CRYBG1Q9Y4K1 1723 aa11.6□□□□□ -0.55
DEPDC5-220ENST00000494065 GLI3P10071 1580 aa11.6□□□□□ -0.55
DEPDC5-220ENST00000494065 RALGAPBQ86X10 1494 aa11.6□□□□□ -0.55
DEPDC5-220ENST00000494065 L3MBTL3Q96JM7 780 aaPredicted RBP11.6□□□□□ -0.55
DEPDC5-220ENST00000494065 NRAPQ86VF7 1730 aa11.6□□□□□ -0.55
DEPDC5-220ENST00000494065 COL14A1Q05707 1796 aaKnown RBP11.59□□□□□ -0.55
DEPDC5-220ENST00000494065 QRICH2Q9H0J4 1663 aa11.59□□□□□ -0.55
DEPDC5-220ENST00000494065 LMOD2Q6P5Q4 547 aa11.59□□□□□ -0.55
DEPDC5-220ENST00000494065 UNC5CLQ8IV45 518 aa11.59□□□□□ -0.55
DEPDC5-220ENST00000494065 PMFBP1Q8TBY8 1022 aa11.59□□□□□ -0.55
DEPDC5-220ENST00000494065 CFAP44Q96MT7 982 aa11.59□□□□□ -0.55
DEPDC5-220ENST00000494065 GJD4Q96KN9 370 aaPredicted RBP11.58□□□□□ -0.56
DEPDC5-220ENST00000494065 TRPM1Q7Z4N2 1603 aa11.57□□□□□ -0.56
DEPDC5-220ENST00000494065 PHRF1Q9P1Y6 1649 aaKnown RBP11.57□□□□□ -0.56
DEPDC5-220ENST00000494065 DPY19L2Q6NUT2 758 aa11.57□□□□□ -0.56
DEPDC5-220ENST00000494065 NGDNQ8NEJ9 315 aaKnown RBP11.57□□□□□ -0.56
DEPDC5-220ENST00000494065 TMEM121BQ9BXQ6 578 aaPredicted RBP11.57□□□□□ -0.56
DEPDC5-220ENST00000494065 PPP1R37O75864 691 aa11.56□□□□□ -0.56
DEPDC5-220ENST00000494065 BOLA1Q9Y3E2 137 aa11.56□□□□□ -0.56
DEPDC5-220ENST00000494065 CENPJQ9HC77 1338 aaPredicted RBP11.56□□□□□ -0.56
DEPDC5-220ENST00000494065 POLR3AO14802 1390 aaPredicted RBP11.55□□□□□ -0.56
DEPDC5-220ENST00000494065 VPS72Q15906 364 aa11.55□□□□□ -0.56
DEPDC5-220ENST00000494065 CABLES1Q8TDN4 633 aa11.55□□□□□ -0.56
DEPDC5-220ENST00000494065 NUDT16Q96DE0 195 aaKnown RBP11.55□□□□□ -0.56
DEPDC5-220ENST00000494065 NRKQ7Z2Y5 1582 aa11.54□□□□□ -0.56
DEPDC5-220ENST00000494065 MICALL2Q8IY33 904 aa11.53□□□□□ -0.56
DEPDC5-220ENST00000494065 CDK19Q9BWU1 502 aa11.53□□□□□ -0.56
DEPDC5-220ENST00000494065 BRD4O60885 1362 aaPredicted RBP11.53□□□□□ -0.56
DEPDC5-220ENST00000494065 PPIP5K1Q6PFW1 1433 aa11.52□□□□□ -0.56
DEPDC5-220ENST00000494065 BRWD3Q6RI45 1802 aa11.52□□□□□ -0.57
DEPDC5-220ENST00000494065 CCDC125Q86Z20 511 aa11.52□□□□□ -0.57
DEPDC5-220ENST00000494065 CCDC9Q9Y3X0 531 aaKnown RBP11.52□□□□□ -0.57
DEPDC5-220ENST00000494065 ROCK2O75116 1388 aaKnown RBP11.52□□□□□ -0.57
DEPDC5-220ENST00000494065 BLMP54132 1417 aaPredicted RBP11.52□□□□□ -0.57
DEPDC5-220ENST00000494065 EP400Q96L91 3159 aa11.51□□□□□ -0.57
DEPDC5-220ENST00000494065 G3V3G9 751 aa11.51□□□□□ -0.57
DEPDC5-220ENST00000494065 NBPF1Q3BBV0 1214 aa11.51□□□□□ -0.57
DEPDC5-220ENST00000494065 PRDM11Q9NQV5 511 aa11.51□□□□□ -0.57
DEPDC5-220ENST00000494065 THSD7AQ9UPZ6 1657 aa11.5□□□□□ -0.57
DEPDC5-220ENST00000494065 PLEKHG3A1L390 1219 aa11.5□□□□□ -0.57
DEPDC5-220ENST00000494065 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
DEPDC5-220ENST00000494065 SRPK2P78362 688 aaKnown RBP11.5□□□□□ -0.57
DEPDC5-220ENST00000494065 L3MBTL2Q969R5 705 aa11.5□□□□□ -0.57
DEPDC5-220ENST00000494065 ACEP12821 1306 aa11.5□□□□□ -0.57
DEPDC5-220ENST00000494065 FAM83GA6ND36 823 aa11.49□□□□□ -0.57
DEPDC5-220ENST00000494065 SEPT12Q8IYM1 358 aa11.49□□□□□ -0.57
DEPDC5-220ENST00000494065 BTG4Q9NY30 223 aa11.49□□□□□ -0.57
DEPDC5-220ENST00000494065 KIAA0232Q92628 1395 aa11.49□□□□□ -0.57
DEPDC5-220ENST00000494065 A0A0G2JS52 829 aa11.48□□□□□ -0.57
DEPDC5-220ENST00000494065 MYT1Q01538 1121 aa11.48□□□□□ -0.57
DEPDC5-220ENST00000494065 USP19O94966 1318 aa11.48□□□□□ -0.57
DEPDC5-220ENST00000494065 EVC2Q86UK5 1308 aa11.48□□□□□ -0.57
DEPDC5-220ENST00000494065 LMO7Q8WWI1 1683 aa11.47□□□□□ -0.57
DEPDC5-220ENST00000494065 USP6P35125 1406 aa11.47□□□□□ -0.57
DEPDC5-220ENST00000494065 CPDO75976 1380 aa11.47□□□□□ -0.57
DEPDC5-220ENST00000494065 NBPF8Q3BBV2 869 aa11.47□□□□□ -0.57
DEPDC5-220ENST00000494065 MAMSTRQ6ZN01 415 aa11.47□□□□□ -0.57
DEPDC5-220ENST00000494065 RGPD1P0DJD0 1748 aa11.46□□□□□ -0.57
DEPDC5-220ENST00000494065 SBNO2Q9Y2G9 1366 aa11.46□□□□□ -0.57
DEPDC5-220ENST00000494065 SPATA31A5Q5VU36 1347 aa11.46□□□□□ -0.57
DEPDC5-220ENST00000494065 SPATA31A7Q8IWB4 1347 aa11.46□□□□□ -0.57
DEPDC5-220ENST00000494065 ONECUT3O60422 494 aaPredicted RBP11.46□□□□□ -0.57
DEPDC5-220ENST00000494065 POTEJP0CG39 1038 aa11.46□□□□□ -0.57
DEPDC5-220ENST00000494065 ZEB1P37275 1124 aaPredicted RBP11.46□□□□□ -0.57
DEPDC5-220ENST00000494065 SF3B2Q13435 895 aaKnown RBP11.46□□□□□ -0.57
DEPDC5-220ENST00000494065 KRT27Q7Z3Y8 459 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms