RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 CDV3Q9UKY7 258 aaKnown RBP11.4□□□□□ -0.58
SSB-212ENST00000494051 NNTQ13423 1086 aa11.39□□□□□ -0.59
SSB-212ENST00000494051 KCTD15Q96SI1 283 aaPredicted RBP11.39□□□□□ -0.59
SSB-212ENST00000494051 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
SSB-212ENST00000494051 NR5A1Q13285 461 aa11.38□□□□□ -0.59
SSB-212ENST00000494051 NBPF20Q3BBV1 942 aa11.38□□□□□ -0.59
SSB-212ENST00000494051 LOC100996750A0A140TA64 210 aa11.36□□□□□ -0.59
SSB-212ENST00000494051 RAB15P59190 212 aa11.36□□□□□ -0.59
SSB-212ENST00000494051 KRTAP4-6Q9BYQ5 205 aa11.36□□□□□ -0.59
SSB-212ENST00000494051 NR3C2P08235 984 aa11.35□□□□□ -0.59
SSB-212ENST00000494051 MCCD1P59942 119 aaPredicted RBP11.35□□□□□ -0.59
SSB-212ENST00000494051 PROSER2Q86WR7 435 aaPredicted RBP11.35□□□□□ -0.59
SSB-212ENST00000494051 ZNF592Q92610 1267 aa11.35□□□□□ -0.59
SSB-212ENST00000494051 GIGYF1O75420 1035 aaPredicted RBP11.34□□□□□ -0.59
SSB-212ENST00000494051 AVPP01185 164 aa11.34□□□□□ -0.59
SSB-212ENST00000494051 MYT1Q01538 1121 aa11.34□□□□□ -0.59
SSB-212ENST00000494051 A6NJR5 290 aa11.33□□□□□ -0.6
SSB-212ENST00000494051 INTS6LQ5JSJ4 861 aaKnown RBP11.33□□□□□ -0.6
SSB-212ENST00000494051 CCDC116Q8IYX3 515 aa11.33□□□□□ -0.6
SSB-212ENST00000494051 WDR4P57081 412 aaKnown RBP11.32□□□□□ -0.6
SSB-212ENST00000494051 SEMA3FQ13275 785 aa11.32□□□□□ -0.6
SSB-212ENST00000494051 ST8SIA5O15466 376 aa11.31□□□□□ -0.6
SSB-212ENST00000494051 CEP126Q9P2H0 1117 aa11.31□□□□□ -0.6
SSB-212ENST00000494051 POM121CA8CG34 1229 aa11.3□□□□□ -0.6
SSB-212ENST00000494051 ESPNB1AK53 854 aa11.3□□□□□ -0.6
SSB-212ENST00000494051 AXIN1O15169 862 aa11.3□□□□□ -0.6
SSB-212ENST00000494051 CTC1Q2NKJ3 1217 aa11.3□□□□□ -0.6
SSB-212ENST00000494051 PPP1R26Q5T8A7 1209 aaPredicted RBP11.3□□□□□ -0.6
SSB-212ENST00000494051 FNBP4Q8N3X1 1017 aaPredicted RBP11.3□□□□□ -0.6
SSB-212ENST00000494051 CAPN5O15484 640 aaPredicted RBP11.29□□□□□ -0.6
SSB-212ENST00000494051 ZIC2O95409 532 aaPredicted RBP11.29□□□□□ -0.6
SSB-212ENST00000494051 SOX11P35716 441 aa11.29□□□□□ -0.6
SSB-212ENST00000494051 DHX9Q08211 1270 aaKnown RBP11.29□□□□□ -0.6
SSB-212ENST00000494051 ITPKCQ96DU7 683 aa11.29□□□□□ -0.6
SSB-212ENST00000494051 AAASQ9NRG9 546 aa11.29□□□□□ -0.6
SSB-212ENST00000494051 EMILIN1Q9Y6C2 1016 aa11.29□□□□□ -0.6
SSB-212ENST00000494051 TIMP2P16035 220 aa11.28□□□□□ -0.6
SSB-212ENST00000494051 RNF20Q5VTR2 975 aa11.28□□□□□ -0.6
SSB-212ENST00000494051 SEPT12Q8IYM1 358 aa11.28□□□□□ -0.6
SSB-212ENST00000494051 KLF16Q9BXK1 252 aaPredicted RBP11.28□□□□□ -0.6
SSB-212ENST00000494051 ZFAND3Q9H8U3 227 aa11.28□□□□□ -0.6
SSB-212ENST00000494051 ERVH48-1M5A8F1 160 aa11.27□□□□□ -0.61
SSB-212ENST00000494051 SMCPP49901 116 aaPredicted RBP11.27□□□□□ -0.61
SSB-212ENST00000494051 C14orf37Q86TY3 774 aa11.26□□□□□ -0.61
SSB-212ENST00000494051 CRIPAKQ8N1N5 446 aa11.26□□□□□ -0.61
SSB-212ENST00000494051 ZMYND15Q9H091 742 aa11.26□□□□□ -0.61
SSB-212ENST00000494051 TMPRSS4Q9NRS4 437 aa11.26□□□□□ -0.61
SSB-212ENST00000494051 PGPEP1Q9NXJ5 209 aa11.26□□□□□ -0.61
SSB-212ENST00000494051 SLFNL1Q499Z3 407 aa11.25□□□□□ -0.61
SSB-212ENST00000494051 ALG2Q9H553 416 aa11.25□□□□□ -0.61
SSB-212ENST00000494051 TRAK2O60296 914 aa11.24□□□□□ -0.61
SSB-212ENST00000494051 HDGFL1Q5TGJ6 251 aa11.24□□□□□ -0.61
SSB-212ENST00000494051 RNF135Q8IUD6 432 aa11.23□□□□□ -0.61
SSB-212ENST00000494051 DACH1Q9UI36 760 aa11.23□□□□□ -0.61
SSB-212ENST00000494051 PCDHB11Q9Y5F2 797 aa11.23□□□□□ -0.61
SSB-212ENST00000494051 ZNF784Q8NCA9 323 aaPredicted RBP11.22□□□□□ -0.61
SSB-212ENST00000494051 ADAMTS19Q8TE59 1207 aa11.22□□□□□ -0.61
SSB-212ENST00000494051 CCDC125Q86Z20 511 aa11.21□□□□□ -0.61
SSB-212ENST00000494051 CYLDQ9NQC7 956 aa11.21□□□□□ -0.61
SSB-212ENST00000494051 ZNF777Q9ULD5 760 aaPredicted RBP11.21□□□□□ -0.61
SSB-212ENST00000494051 BMP1P13497 986 aa11.2□□□□□ -0.62
SSB-212ENST00000494051 CBLBQ13191 982 aa11.2□□□□□ -0.62
SSB-212ENST00000494051 PHTF2Q8N3S3 785 aa11.2□□□□□ -0.62
SSB-212ENST00000494051 CCDC85AQ96PX6 553 aaPredicted RBP11.2□□□□□ -0.62
SSB-212ENST00000494051 TSGA10IPQ3SY00 556 aa11.19□□□□□ -0.62
SSB-212ENST00000494051 GLMNQ92990 594 aa11.19□□□□□ -0.62
SSB-212ENST00000494051 PIK3CDO00329 1044 aa11.18□□□□□ -0.62
SSB-212ENST00000494051 TRIM52Q96A61 297 aa11.18□□□□□ -0.62
SSB-212ENST00000494051 ATP13A2Q9NQ11 1180 aa11.18□□□□□ -0.62
SSB-212ENST00000494051 LILRA1O75019 489 aa11.17□□□□□ -0.62
SSB-212ENST00000494051 CALR3Q96L12 384 aaKnown RBP11.17□□□□□ -0.62
SSB-212ENST00000494051 CDCA7Q9BWT1 371 aaPredicted RBP11.17□□□□□ -0.62
SSB-212ENST00000494051 ESF1Q9H501 851 aaKnown RBP11.17□□□□□ -0.62
SSB-212ENST00000494051 DOLKQ9UPQ8 538 aa11.17□□□□□ -0.62
SSB-212ENST00000494051 UPP2O95045 317 aa11.16□□□□□ -0.62
SSB-212ENST00000494051 ADD1P35611 737 aaKnown RBP11.16□□□□□ -0.62
SSB-212ENST00000494051 MRPL14Q6P1L8 145 aaKnown RBP11.16□□□□□ -0.62
SSB-212ENST00000494051 TRIM46Q7Z4K8 759 aa11.16□□□□□ -0.62
SSB-212ENST00000494051 MEIOBQ8N635 442 aa11.16□□□□□ -0.62
SSB-212ENST00000494051 SKIP12755 728 aa11.15□□□□□ -0.62
SSB-212ENST00000494051 SCTRP47872 440 aa11.15□□□□□ -0.62
SSB-212ENST00000494051 CC2D2BQ6DHV5 1058 aa11.15□□□□□ -0.62
SSB-212ENST00000494051 Q6ZVU0 165 aa11.15□□□□□ -0.62
SSB-212ENST00000494051 AGBL1Q96MI9 1066 aa11.15□□□□□ -0.62
SSB-212ENST00000494051 ERVK-9P63128 1117 aa11.14□□□□□ -0.63
SSB-212ENST00000494051 SCARF1Q14162 830 aa11.14□□□□□ -0.63
SSB-212ENST00000494051 OXLD1Q5BKU9 147 aa11.14□□□□□ -0.63
SSB-212ENST00000494051 C6orf118Q5T5N4 469 aa11.14□□□□□ -0.63
SSB-212ENST00000494051 PLPP7Q8NBV4 271 aa11.14□□□□□ -0.63
SSB-212ENST00000494051 PURBQ96QR8 312 aaKnown RBP11.14□□□□□ -0.63
SSB-212ENST00000494051 BMP2P12643 396 aa11.13□□□□□ -0.63
SSB-212ENST00000494051 RELBQ01201 579 aa11.13□□□□□ -0.63
SSB-212ENST00000494051 MAP7D1Q3KQU3 841 aa11.13□□□□□ -0.63
SSB-212ENST00000494051 TSEN34Q9BSV6 310 aaKnown RBP11.13□□□□□ -0.63
SSB-212ENST00000494051 GMPR2Q9P2T1 348 aaKnown RBP11.13□□□□□ -0.63
SSB-212ENST00000494051 MYCP01106 439 aaPredicted RBP11.12□□□□□ -0.63
SSB-212ENST00000494051 LINC00528Q8N1L1 170 aa11.12□□□□□ -0.63
SSB-212ENST00000494051 ZFP42Q96MM3 310 aa11.12□□□□□ -0.63
SSB-212ENST00000494051 CHIC2Q9UKJ5 165 aa11.12□□□□□ -0.63
SSB-212ENST00000494051 ADH1AP07327 375 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms