RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 POM121Q96HA1 1249 aa9.24□□□□□ -0.93
ITGB1-216ENST00000493758 KLF16Q9BXK1 252 aaPredicted RBP9.24□□□□□ -0.93
ITGB1-216ENST00000493758 A6NJR5 290 aa9.23□□□□□ -0.93
ITGB1-216ENST00000493758 SOX11P35716 441 aa9.23□□□□□ -0.93
ITGB1-216ENST00000493758 Q6ZNB5 142 aa9.23□□□□□ -0.93
ITGB1-216ENST00000493758 ABL2P42684 1182 aa9.22□□□□□ -0.93
ITGB1-216ENST00000493758 DZIP3Q86Y13 1208 aaKnown RBP9.22□□□□□ -0.93
ITGB1-216ENST00000493758 WWC1Q8IX03 1113 aa9.22□□□□□ -0.93
ITGB1-216ENST00000493758 HPS1Q92902 700 aa9.22□□□□□ -0.93
ITGB1-216ENST00000493758 KCTD15Q96SI1 283 aaPredicted RBP9.22□□□□□ -0.93
ITGB1-216ENST00000493758 NR3C2P08235 984 aa9.21□□□□□ -0.94
ITGB1-216ENST00000493758 EIF4G2P78344 907 aaKnown RBP eCLIP9.21□□□□□ -0.94
ITGB1-216ENST00000493758 INTS6LQ5JSJ4 861 aaKnown RBP9.21□□□□□ -0.94
ITGB1-216ENST00000493758 FNBP4Q8N3X1 1017 aaPredicted RBP9.21□□□□□ -0.94
ITGB1-216ENST00000493758 DHX9Q08211 1270 aaKnown RBP9.2□□□□□ -0.94
ITGB1-216ENST00000493758 ARID5BQ14865 1188 aa9.2□□□□□ -0.94
ITGB1-216ENST00000493758 CCDC116Q8IYX3 515 aa9.2□□□□□ -0.94
ITGB1-216ENST00000493758 TIMP2P16035 220 aa9.19□□□□□ -0.94
ITGB1-216ENST00000493758 TRAF7Q6Q0C0 670 aa9.19□□□□□ -0.94
ITGB1-216ENST00000493758 PROSER2Q86WR7 435 aaPredicted RBP9.19□□□□□ -0.94
ITGB1-216ENST00000493758 AAASQ9NRG9 546 aa9.19□□□□□ -0.94
ITGB1-216ENST00000493758 PCDHB9Q9Y5E1 797 aa9.19□□□□□ -0.94
ITGB1-216ENST00000493758 GTF3C3Q9Y5Q9 886 aa9.19□□□□□ -0.94
ITGB1-216ENST00000493758 EMILIN1Q9Y6C2 1016 aa9.19□□□□□ -0.94
ITGB1-216ENST00000493758 VAC14Q08AM6 782 aa9.17□□□□□ -0.94
ITGB1-216ENST00000493758 TRIM52Q96A61 297 aa9.17□□□□□ -0.94
ITGB1-216ENST00000493758 AXIN1O15169 862 aa9.16□□□□□ -0.94
ITGB1-216ENST00000493758 RNF20Q5VTR2 975 aa9.16□□□□□ -0.94
ITGB1-216ENST00000493758 WDR4P57081 412 aaKnown RBP9.15□□□□□ -0.94
ITGB1-216ENST00000493758 PPP1R26Q5T8A7 1209 aaPredicted RBP9.15□□□□□ -0.94
ITGB1-216ENST00000493758 CLUAP1Q96AJ1 413 aa9.15□□□□□ -0.94
ITGB1-216ENST00000493758 CHIC2Q9UKJ5 165 aa9.15□□□□□ -0.94
ITGB1-216ENST00000493758 MEIOBQ8N635 442 aa9.14□□□□□ -0.95
ITGB1-216ENST00000493758 ITPKCQ96DU7 683 aa9.14□□□□□ -0.95
ITGB1-216ENST00000493758 PGPEP1Q9NXJ5 209 aa9.14□□□□□ -0.95
ITGB1-216ENST00000493758 CEP126Q9P2H0 1117 aa9.14□□□□□ -0.95
ITGB1-216ENST00000493758 ST8SIA5O15466 376 aa9.13□□□□□ -0.95
ITGB1-216ENST00000493758 CAPN5O15484 640 aaPredicted RBP9.13□□□□□ -0.95
ITGB1-216ENST00000493758 GIGYF1O75420 1035 aaPredicted RBP9.13□□□□□ -0.95
ITGB1-216ENST00000493758 ZIC2O95409 532 aaPredicted RBP9.13□□□□□ -0.95
ITGB1-216ENST00000493758 Q6ZVU0 165 aa9.13□□□□□ -0.95
ITGB1-216ENST00000493758 ALG2Q9H553 416 aa9.13□□□□□ -0.95
ITGB1-216ENST00000493758 PHTF2Q8N3S3 785 aa9.12□□□□□ -0.95
ITGB1-216ENST00000493758 ERVH48-1M5A8F1 160 aa9.11□□□□□ -0.95
ITGB1-216ENST00000493758 NFATC2IPQ8NCF5 419 aa9.11□□□□□ -0.95
ITGB1-216ENST00000493758 ERVK-9P63128 1117 aa9.1□□□□□ -0.95
ITGB1-216ENST00000493758 SEMA3FQ13275 785 aa9.1□□□□□ -0.95
ITGB1-216ENST00000493758 ZNF784Q8NCA9 323 aaPredicted RBP9.1□□□□□ -0.95
ITGB1-216ENST00000493758 ZFAND3Q9H8U3 227 aa9.1□□□□□ -0.95
ITGB1-216ENST00000493758 ATP13A2Q9NQ11 1180 aa9.1□□□□□ -0.95
ITGB1-216ENST00000493758 LILRA1O75019 489 aa9.09□□□□□ -0.95
ITGB1-216ENST00000493758 ADAMTS19Q8TE59 1207 aa9.09□□□□□ -0.95
ITGB1-216ENST00000493758 POM121CA8CG34 1229 aa9.08□□□□□ -0.96
ITGB1-216ENST00000493758 TRAK2O60296 914 aa9.07□□□□□ -0.96
ITGB1-216ENST00000493758 SLFNL1Q499Z3 407 aa9.07□□□□□ -0.96
ITGB1-216ENST00000493758 TRIM46Q7Z4K8 759 aa9.07□□□□□ -0.96
ITGB1-216ENST00000493758 MAP7D1Q3KQU3 841 aa9.06□□□□□ -0.96
ITGB1-216ENST00000493758 MRPL14Q6P1L8 145 aaKnown RBP9.06□□□□□ -0.96
ITGB1-216ENST00000493758 RNF135Q8IUD6 432 aa9.06□□□□□ -0.96
ITGB1-216ENST00000493758 LINC00528Q8N1L1 170 aa9.06□□□□□ -0.96
ITGB1-216ENST00000493758 CCDC85AQ96PX6 553 aaPredicted RBP9.06□□□□□ -0.96
ITGB1-216ENST00000493758 SENP2Q9HC62 589 aa9.06□□□□□ -0.96
ITGB1-216ENST00000493758 ADH1AP07327 375 aa9.05□□□□□ -0.96
ITGB1-216ENST00000493758 CC2D2BQ6DHV5 1058 aa9.05□□□□□ -0.96
ITGB1-216ENST00000493758 ERICH6Q7L0X2 663 aa9.05□□□□□ -0.96
ITGB1-216ENST00000493758 KIFC2Q96AC6 838 aa9.05□□□□□ -0.96
ITGB1-216ENST00000493758 TRIM47Q96LD4 638 aa9.05□□□□□ -0.96
ITGB1-216ENST00000493758 TSEN34Q9BSV6 310 aaKnown RBP9.05□□□□□ -0.96
ITGB1-216ENST00000493758 TMPRSS4Q9NRS4 437 aa9.05□□□□□ -0.96
ITGB1-216ENST00000493758 DACH1Q9UI36 760 aa9.05□□□□□ -0.96
ITGB1-216ENST00000493758 BMP1P13497 986 aa9.04□□□□□ -0.96
ITGB1-216ENST00000493758 GLMNQ92990 594 aa9.04□□□□□ -0.96
ITGB1-216ENST00000493758 ZMYND15Q9H091 742 aa9.04□□□□□ -0.96
ITGB1-216ENST00000493758 PCDHB11Q9Y5F2 797 aa9.04□□□□□ -0.96
ITGB1-216ENST00000493758 LZTS3O60299 673 aaPredicted RBP9.03□□□□□ -0.96
ITGB1-216ENST00000493758 RAB15P59190 212 aa9.03□□□□□ -0.96
ITGB1-216ENST00000493758 UCN2Q96RP3 112 aa9.03□□□□□ -0.96
ITGB1-216ENST00000493758 DOLKQ9UPQ8 538 aa9.03□□□□□ -0.96
ITGB1-216ENST00000493758 SPINT1O43278 529 aa9.02□□□□□ -0.97
ITGB1-216ENST00000493758 UPP2O95045 317 aa9.02□□□□□ -0.97
ITGB1-216ENST00000493758 CBLBQ13191 982 aa9.02□□□□□ -0.97
ITGB1-216ENST00000493758 SCARF1Q14162 830 aa9.02□□□□□ -0.97
ITGB1-216ENST00000493758 KDF1Q8NAX2 398 aaPredicted RBP9.02□□□□□ -0.97
ITGB1-216ENST00000493758 PLPP7Q8NBV4 271 aa9.02□□□□□ -0.97
ITGB1-216ENST00000493758 ADD1P35611 737 aaKnown RBP9.01□□□□□ -0.97
ITGB1-216ENST00000493758 SCTRP47872 440 aa9.01□□□□□ -0.97
ITGB1-216ENST00000493758 CYP2U1Q7Z449 544 aa9.01□□□□□ -0.97
ITGB1-216ENST00000493758 PLEKHM2Q8IWE5 1019 aa9.01□□□□□ -0.97
ITGB1-216ENST00000493758 CYLDQ9NQC7 956 aa9.01□□□□□ -0.97
ITGB1-216ENST00000493758 GMPR2Q9P2T1 348 aaKnown RBP9.01□□□□□ -0.97
ITGB1-216ENST00000493758 PIK3CDO00329 1044 aa9□□□□□ -0.97
ITGB1-216ENST00000493758 HDGFL1Q5TGJ6 251 aa9□□□□□ -0.97
ITGB1-216ENST00000493758 SIRT1Q96EB6 747 aa9□□□□□ -0.97
ITGB1-216ENST00000493758 OSBPL3Q9H4L5 887 aa9□□□□□ -0.97
ITGB1-216ENST00000493758 MYCP01106 439 aaPredicted RBP8.99□□□□□ -0.97
ITGB1-216ENST00000493758 ZFP42Q96MM3 310 aa8.99□□□□□ -0.97
ITGB1-216ENST00000493758 USP4Q13107 963 aa8.98□□□□□ -0.97
ITGB1-216ENST00000493758 PURBQ96QR8 312 aaKnown RBP8.98□□□□□ -0.97
ITGB1-216ENST00000493758 CDCA7Q9BWT1 371 aaPredicted RBP8.98□□□□□ -0.97
ITGB1-216ENST00000493758 USP17L5A8MUK1 530 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms