RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 FAM135BQ49AJ0 1406 aa17.59■□□□□ 0.41
ZIC4-215ENST00000493664 NFE2L2Q16236 605 aa17.59■□□□□ 0.41
ZIC4-215ENST00000493664 TNPO1Q92973 898 aaKnown RBP17.59■□□□□ 0.41
ZIC4-215ENST00000493664 KIF2CQ99661 725 aa17.59■□□□□ 0.41
ZIC4-215ENST00000493664 ARHGAP31Q2M1Z3 1444 aa17.59■□□□□ 0.41
ZIC4-215ENST00000493664 BMP2KLQ5H9B9 411 aa17.59■□□□□ 0.41
ZIC4-215ENST00000493664 MBIPQ9NS73 344 aa17.59■□□□□ 0.41
ZIC4-215ENST00000493664 TMEM131LA2VDJ0 1609 aa17.58■□□□□ 0.41
ZIC4-215ENST00000493664 FAM83GA6ND36 823 aa17.58■□□□□ 0.4
ZIC4-215ENST00000493664 DDIT3P35638 169 aa17.58■□□□□ 0.4
ZIC4-215ENST00000493664 MAP2P11137 1827 aaKnown RBP17.58■□□□□ 0.4
ZIC4-215ENST00000493664 TBC1D9Q6ZT07 1266 aa17.58■□□□□ 0.4
ZIC4-215ENST00000493664 ARHGEF40Q8TER5 1519 aa17.57■□□□□ 0.4
ZIC4-215ENST00000493664 DCTN1Q14203 1278 aa17.57■□□□□ 0.4
ZIC4-215ENST00000493664 KIF20BQ96Q89 1820 aa17.57■□□□□ 0.4
ZIC4-215ENST00000493664 HSP90AA1P07900 732 aaKnown RBP17.57■□□□□ 0.4
ZIC4-215ENST00000493664 NME9Q86XW9 330 aa17.57■□□□□ 0.4
ZIC4-215ENST00000493664 C8orf58Q8NAV2 365 aa17.57■□□□□ 0.4
ZIC4-215ENST00000493664 NCOA3Q9Y6Q9 1424 aa17.57■□□□□ 0.4
ZIC4-215ENST00000493664 SNX21Q969T3 373 aa17.56■□□□□ 0.4
ZIC4-215ENST00000493664 TSPOAP1O95153 1857 aa17.56■□□□□ 0.4
ZIC4-215ENST00000493664 DDX11L8A8MPP1 907 aa17.55■□□□□ 0.4
ZIC4-215ENST00000493664 TWISTNBQ3B726 338 aaPredicted RBP17.55■□□□□ 0.4
ZIC4-215ENST00000493664 GCC1Q96CN9 775 aa17.55■□□□□ 0.4
ZIC4-215ENST00000493664 CLTCQ00610 1675 aaKnown RBP17.55■□□□□ 0.4
ZIC4-215ENST00000493664 ALKQ9UM73 1620 aa17.55■□□□□ 0.4
ZIC4-215ENST00000493664 NCKAP5LQ9HCH0 1330 aa17.55■□□□□ 0.4
ZIC4-215ENST00000493664 PREX1Q8TCU6 1659 aa17.55■□□□□ 0.4
ZIC4-215ENST00000493664 RRS1Q15050 365 aaKnown RBP17.55■□□□□ 0.4
ZIC4-215ENST00000493664 GNAI1P63096 354 aa17.54■□□□□ 0.4
ZIC4-215ENST00000493664 BRPF1P55201 1214 aaPredicted RBP17.54■□□□□ 0.4
ZIC4-215ENST00000493664 IL13P35225 146 aa17.53■□□□□ 0.4
ZIC4-215ENST00000493664 NEO1Q92859 1461 aa17.53■□□□□ 0.4
ZIC4-215ENST00000493664 ZNF428Q96B54 188 aa17.53■□□□□ 0.4
ZIC4-215ENST00000493664 GRPEL1Q9HAV7 217 aa17.53■□□□□ 0.4
ZIC4-215ENST00000493664 KIF13AQ9H1H9 1805 aa17.53■□□□□ 0.4
ZIC4-215ENST00000493664 IFT57Q9NWB7 429 aa17.52■□□□□ 0.4
ZIC4-215ENST00000493664 MRE11P49959 708 aa17.52■□□□□ 0.4
ZIC4-215ENST00000493664 PTCH1Q13635 1447 aa17.52■□□□□ 0.39
ZIC4-215ENST00000493664 ARHGAP45Q92619 1136 aa17.52■□□□□ 0.39
ZIC4-215ENST00000493664 ABCC4O15439 1325 aa17.51■□□□□ 0.39
ZIC4-215ENST00000493664 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
ZIC4-215ENST00000493664 GAS2L3Q86XJ1 694 aa17.51■□□□□ 0.39
ZIC4-215ENST00000493664 CDC42BPGQ6DT37 1551 aa17.51■□□□□ 0.39
ZIC4-215ENST00000493664 ZNF853P0CG23 659 aa17.51■□□□□ 0.39
ZIC4-215ENST00000493664 RAB3GAP1Q15042 981 aa17.51■□□□□ 0.39
ZIC4-215ENST00000493664 KRT24Q2M2I5 525 aa17.51■□□□□ 0.39
ZIC4-215ENST00000493664 C16orf71Q8IYS4 520 aaPredicted RBP17.51■□□□□ 0.39
ZIC4-215ENST00000493664 AK9Q5TCS8 1911 aa17.51■□□□□ 0.39
ZIC4-215ENST00000493664 GSPT1P15170 499 aaKnown RBP17.5■□□□□ 0.39
ZIC4-215ENST00000493664 GAS2L2Q8NHY3 880 aa17.5■□□□□ 0.39
ZIC4-215ENST00000493664 K7ELQ4 463 aaPredicted RBP17.5■□□□□ 0.39
ZIC4-215ENST00000493664 RICTORQ6R327 1708 aa17.5■□□□□ 0.39
ZIC4-215ENST00000493664 PIK3R4Q99570 1358 aa17.5■□□□□ 0.39
ZIC4-215ENST00000493664 CALD1Q05682 793 aaKnown RBP17.49■□□□□ 0.39
ZIC4-215ENST00000493664 APBB1O00213 710 aa17.49■□□□□ 0.39
ZIC4-215ENST00000493664 SSFA2P28290 1259 aa17.49■□□□□ 0.39
ZIC4-215ENST00000493664 GLIPR1L2Q4G1C9 344 aa17.49■□□□□ 0.39
ZIC4-215ENST00000493664 GBP4Q96PP9 640 aa17.49■□□□□ 0.39
ZIC4-215ENST00000493664 CFAP44Q96MT7 982 aa17.49■□□□□ 0.39
ZIC4-215ENST00000493664 DLG5Q8TDM6 1919 aa17.48■□□□□ 0.39
ZIC4-215ENST00000493664 CHMP4BQ9H444 224 aaKnown RBP17.48■□□□□ 0.39
ZIC4-215ENST00000493664 OTUD7AQ8TE49 926 aaPredicted RBP17.47■□□□□ 0.39
ZIC4-215ENST00000493664 CIZ1Q9ULV3 898 aaPredicted RBP17.47■□□□□ 0.39
ZIC4-215ENST00000493664 CDC45O75419 566 aa17.47■□□□□ 0.39
ZIC4-215ENST00000493664 TXNDC2Q86VQ3 553 aa17.47■□□□□ 0.39
ZIC4-215ENST00000493664 PLEKHM2Q8IWE5 1019 aa17.47■□□□□ 0.39
ZIC4-215ENST00000493664 AEBP1Q8IUX7 1158 aa17.46■□□□□ 0.39
ZIC4-215ENST00000493664 MLECQ14165 292 aa17.46■□□□□ 0.38
ZIC4-215ENST00000493664 API5Q9BZZ5 524 aaKnown RBP17.46■□□□□ 0.38
ZIC4-215ENST00000493664 ATP7BP35670 1465 aa17.45■□□□□ 0.38
ZIC4-215ENST00000493664 RIMS2Q9UQ26 1411 aa17.45■□□□□ 0.38
ZIC4-215ENST00000493664 WASLO00401 505 aaPredicted RBP17.45■□□□□ 0.38
ZIC4-215ENST00000493664 COG3Q96JB2 828 aa17.45■□□□□ 0.38
ZIC4-215ENST00000493664 KNDC1Q76NI1 1749 aa17.44■□□□□ 0.38
ZIC4-215ENST00000493664 NAP1L5Q96NT1 182 aaPredicted RBP17.44■□□□□ 0.38
ZIC4-215ENST00000493664 SMARCA5O60264 1052 aaPredicted RBP17.44■□□□□ 0.38
ZIC4-215ENST00000493664 ERBB4Q15303 1308 aa17.44■□□□□ 0.38
ZIC4-215ENST00000493664 NUDT16Q96DE0 195 aaKnown RBP17.43■□□□□ 0.38
ZIC4-215ENST00000493664 DCTPP1Q9H773 170 aa17.43■□□□□ 0.38
ZIC4-215ENST00000493664 CLCN1P35523 988 aa17.43■□□□□ 0.38
ZIC4-215ENST00000493664 ZMYND15Q9H091 742 aa17.43■□□□□ 0.38
ZIC4-215ENST00000493664 MCM10Q7L590 875 aa17.42■□□□□ 0.38
ZIC4-215ENST00000493664 EDC4Q6P2E9 1401 aaKnown RBP17.42■□□□□ 0.38
ZIC4-215ENST00000493664 CPS1P31327 1500 aa17.42■□□□□ 0.38
ZIC4-215ENST00000493664 LMOD3Q0VAK6 560 aa17.42■□□□□ 0.38
ZIC4-215ENST00000493664 CPSF1Q10570 1443 aaKnown RBP17.42■□□□□ 0.38
ZIC4-215ENST00000493664 TTC22Q5TAA0 569 aa17.41■□□□□ 0.38
ZIC4-215ENST00000493664 SULT6B1Q6IMI4 303 aa17.41■□□□□ 0.38
ZIC4-215ENST00000493664 CDK12Q9NYV4 1490 aaPredicted RBP17.41■□□□□ 0.38
ZIC4-215ENST00000493664 NUTM2FA1L443 756 aa17.4■□□□□ 0.38
ZIC4-215ENST00000493664 SOX12O15370 315 aa17.4■□□□□ 0.38
ZIC4-215ENST00000493664 PKP1Q13835 747 aa17.4■□□□□ 0.38
ZIC4-215ENST00000493664 METP08581 1390 aa17.4■□□□□ 0.38
ZIC4-215ENST00000493664 A2ML1A8K2U0 1454 aa17.39■□□□□ 0.37
ZIC4-215ENST00000493664 BAG4O95429 457 aaKnown RBP17.39■□□□□ 0.37
ZIC4-215ENST00000493664 SKOR2Q2VWA4 1001 aaPredicted RBP17.39■□□□□ 0.37
ZIC4-215ENST00000493664 MIS18AQ9NYP9 233 aa17.39■□□□□ 0.37
ZIC4-215ENST00000493664 ESPNB1AK53 854 aa17.39■□□□□ 0.37
ZIC4-215ENST00000493664 MEIS3Q99687 375 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms