RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 ERVK-7P63135 1459 aa8.3□□□□□ -1.08
EWSR1-220ENST00000493426 ZCCHC11Q5TAX3 1644 aaKnown RBP8.29□□□□□ -1.08
EWSR1-220ENST00000493426 HNRNPMP52272 730 aaKnown RBP eCLIP8.29□□□□□ -1.08
EWSR1-220ENST00000493426 PPP4R3BQ5MIZ7 849 aa8.29□□□□□ -1.08
EWSR1-220ENST00000493426 FTSJ3Q8IY81 847 aaKnown RBP8.29□□□□□ -1.08
EWSR1-220ENST00000493426 PROM2Q8N271 834 aa8.29□□□□□ -1.08
EWSR1-220ENST00000493426 PIBF1Q8WXW3 757 aa8.29□□□□□ -1.08
EWSR1-220ENST00000493426 CLEC11AQ9Y240 323 aa8.29□□□□□ -1.08
EWSR1-220ENST00000493426 NSD2O96028 1365 aa8.29□□□□□ -1.08
EWSR1-220ENST00000493426 PIK3R4Q99570 1358 aa8.29□□□□□ -1.08
EWSR1-220ENST00000493426 ZNF518AQ6AHZ1 1483 aa8.29□□□□□ -1.08
EWSR1-220ENST00000493426 ADGRB2O60241 1585 aa8.29□□□□□ -1.08
EWSR1-220ENST00000493426 SHPRHQ149N8 1683 aa8.29□□□□□ -1.08
EWSR1-220ENST00000493426 CLTCL1P53675 1640 aa8.29□□□□□ -1.08
EWSR1-220ENST00000493426 USP32Q8NFA0 1604 aa8.29□□□□□ -1.08
EWSR1-220ENST00000493426 KDM5AP29375 1690 aaKnown RBP8.28□□□□□ -1.08
EWSR1-220ENST00000493426 MYOM2P54296 1465 aa8.28□□□□□ -1.08
EWSR1-220ENST00000493426 KIF24Q5T7B8 1368 aa8.28□□□□□ -1.08
EWSR1-220ENST00000493426 CDC45O75419 566 aa8.28□□□□□ -1.08
EWSR1-220ENST00000493426 TPM3P06753 285 aa8.28□□□□□ -1.08
EWSR1-220ENST00000493426 TRIM27P14373 513 aa8.28□□□□□ -1.08
EWSR1-220ENST00000493426 ZNF710Q8N1W2 664 aa8.28□□□□□ -1.08
EWSR1-220ENST00000493426 PDCL2Q8N4E4 241 aa8.28□□□□□ -1.08
EWSR1-220ENST00000493426 ANKRD7Q92527 254 aa8.28□□□□□ -1.08
EWSR1-220ENST00000493426 CFAP53Q96M91 514 aa8.28□□□□□ -1.08
EWSR1-220ENST00000493426 FBXO3Q9UK99 471 aa8.28□□□□□ -1.08
EWSR1-220ENST00000493426 ARHGAP5Q13017 1502 aa8.28□□□□□ -1.08
EWSR1-220ENST00000493426 ASXL2Q76L83 1435 aa8.28□□□□□ -1.08
EWSR1-220ENST00000493426 MED14O60244 1454 aa8.27□□□□□ -1.09
EWSR1-220ENST00000493426 VGFO15240 615 aaPredicted RBP8.27□□□□□ -1.09
EWSR1-220ENST00000493426 CD2BP2O95400 341 aaKnown RBP8.27□□□□□ -1.09
EWSR1-220ENST00000493426 GABPB1Q06547 395 aaPredicted RBP8.27□□□□□ -1.09
EWSR1-220ENST00000493426 SLC20A2Q08357 652 aa8.27□□□□□ -1.09
EWSR1-220ENST00000493426 TBC1D9Q6ZT07 1266 aa8.27□□□□□ -1.09
EWSR1-220ENST00000493426 CREBRFQ8IUR6 639 aa8.27□□□□□ -1.09
EWSR1-220ENST00000493426 IL17RAQ96F46 866 aa8.27□□□□□ -1.09
EWSR1-220ENST00000493426 MAP3K4Q9Y6R4 1608 aa8.27□□□□□ -1.09
EWSR1-220ENST00000493426 TRPM2O94759 1503 aa8.27□□□□□ -1.09
EWSR1-220ENST00000493426 CFAP74Q9C0B2 1584 aa8.27□□□□□ -1.09
EWSR1-220ENST00000493426 SPHKAPQ2M3C7 1700 aa8.26□□□□□ -1.09
EWSR1-220ENST00000493426 CTIFO43310 598 aaKnown RBP8.26□□□□□ -1.09
EWSR1-220ENST00000493426 MCM2P49736 904 aa8.26□□□□□ -1.09
EWSR1-220ENST00000493426 FKBP5Q13451 457 aaPredicted RBP8.26□□□□□ -1.09
EWSR1-220ENST00000493426 NOLC1Q14978 699 aaKnown RBP eCLIP8.26□□□□□ -1.09
EWSR1-220ENST00000493426 MCTP1Q6DN14 999 aa8.26□□□□□ -1.09
EWSR1-220ENST00000493426 CAVIN1Q6NZI2 390 aaKnown RBP8.26□□□□□ -1.09
EWSR1-220ENST00000493426 GPT2Q8TD30 523 aa8.26□□□□□ -1.09
EWSR1-220ENST00000493426 SSH1Q8WYL5 1049 aa8.26□□□□□ -1.09
EWSR1-220ENST00000493426 SYAP1Q96A49 352 aaPredicted RBP8.26□□□□□ -1.09
EWSR1-220ENST00000493426 DIAPH3Q9NSV4 1193 aa8.26□□□□□ -1.09
EWSR1-220ENST00000493426 KIF3AQ9Y496 699 aa8.26□□□□□ -1.09
EWSR1-220ENST00000493426 PPRC1Q5VV67 1664 aaKnown RBP8.26□□□□□ -1.09
EWSR1-220ENST00000493426 PPIP5K1Q6PFW1 1433 aa8.26□□□□□ -1.09
EWSR1-220ENST00000493426 TRAPPC8Q9Y2L5 1435 aa8.26□□□□□ -1.09
EWSR1-220ENST00000493426 MYO3AQ8NEV4 1616 aa8.25□□□□□ -1.09
EWSR1-220ENST00000493426 SYCP2Q9BX26 1530 aa8.25□□□□□ -1.09
EWSR1-220ENST00000493426 PITPNM1O00562 1244 aa8.25□□□□□ -1.09
EWSR1-220ENST00000493426 ZBTB7BO15156 539 aaPredicted RBP8.25□□□□□ -1.09
EWSR1-220ENST00000493426 PHF14O94880 888 aa8.25□□□□□ -1.09
EWSR1-220ENST00000493426 FAM69CQ0P6D2 419 aa8.25□□□□□ -1.09
EWSR1-220ENST00000493426 CHRDL2Q6WN34 429 aa8.25□□□□□ -1.09
EWSR1-220ENST00000493426 MORC1Q86VD1 984 aa8.25□□□□□ -1.09
EWSR1-220ENST00000493426 USP26Q9BXU7 913 aa8.25□□□□□ -1.09
EWSR1-220ENST00000493426 SMC4Q9NTJ3 1288 aa8.25□□□□□ -1.09
EWSR1-220ENST00000493426 TMEM63CQ9P1W3 806 aa8.25□□□□□ -1.09
EWSR1-220ENST00000493426 ZDHHC9Q9Y397 364 aa8.25□□□□□ -1.09
EWSR1-220ENST00000493426 CEP152O94986 1710 aa8.25□□□□□ -1.09
EWSR1-220ENST00000493426 NRXN1Q9ULB1 1477 aa8.25□□□□□ -1.09
EWSR1-220ENST00000493426 PRR29P0C7W0 189 aa8.24□□□□□ -1.09
EWSR1-220ENST00000493426 GTF2E1P29083 439 aaPredicted RBP8.24□□□□□ -1.09
EWSR1-220ENST00000493426 PDE4CQ08493 712 aa8.24□□□□□ -1.09
EWSR1-220ENST00000493426 CUL4AQ13619 759 aa8.24□□□□□ -1.09
EWSR1-220ENST00000493426 TMEM57Q8N5G2 664 aa8.24□□□□□ -1.09
EWSR1-220ENST00000493426 INTS4Q96HW7 963 aaKnown RBP8.24□□□□□ -1.09
EWSR1-220ENST00000493426 TSPY26PQ9H489 355 aa8.24□□□□□ -1.09
EWSR1-220ENST00000493426 OGFRQ9NZT2 677 aa8.24□□□□□ -1.09
EWSR1-220ENST00000493426 NOB1Q9ULX3 412 aaKnown RBP8.24□□□□□ -1.09
EWSR1-220ENST00000493426 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.24□□□□□ -1.091e-15■■■□□ 15.7
EWSR1-220ENST00000493426 ABCC1P33527 1531 aa8.24□□□□□ -1.09
EWSR1-220ENST00000493426 EPB41L2O43491 1005 aaKnown RBP8.23□□□□□ -1.09
EWSR1-220ENST00000493426 PRPF40AO75400 957 aaKnown RBP8.23□□□□□ -1.09
EWSR1-220ENST00000493426 BRD1O95696 1058 aa8.23□□□□□ -1.09
EWSR1-220ENST00000493426 EXOSC9Q06265 439 aaKnown RBP8.23□□□□□ -1.09
EWSR1-220ENST00000493426 ITPRIPQ8IWB1 547 aa8.23□□□□□ -1.09
EWSR1-220ENST00000493426 TMEM87AQ8NBN3 555 aa8.23□□□□□ -1.09
EWSR1-220ENST00000493426 PLEKHF1Q96S99 279 aa8.23□□□□□ -1.09
EWSR1-220ENST00000493426 LNPKQ9C0E8 428 aa8.23□□□□□ -1.09
EWSR1-220ENST00000493426 TMEM51Q9NW97 253 aa8.23□□□□□ -1.09
EWSR1-220ENST00000493426 ZHX1Q9UKY1 873 aaPredicted RBP8.23□□□□□ -1.09
EWSR1-220ENST00000493426 TSPOAP1O95153 1857 aa8.22□□□□□ -1.09
EWSR1-220ENST00000493426 A0A0U1RQG5 324 aaPredicted RBP8.22□□□□□ -1.09
EWSR1-220ENST00000493426 ST18O60284 1047 aa8.22□□□□□ -1.09
EWSR1-220ENST00000493426 ATP2B3Q16720 1220 aa8.22□□□□□ -1.09
EWSR1-220ENST00000493426 USP25Q9UHP3 1055 aa8.22□□□□□ -1.09
EWSR1-220ENST00000493426 TRIM35Q9UPQ4 493 aa8.22□□□□□ -1.09
EWSR1-220ENST00000493426 SETBP1Q9Y6X0 1596 aa8.22□□□□□ -1.09
EWSR1-220ENST00000493426 ATAD2Q6PL18 1390 aa8.22□□□□□ -1.09
EWSR1-220ENST00000493426 PTCH1Q13635 1447 aa8.21□□□□□ -1.09
EWSR1-220ENST00000493426 TMPOP42166 694 aaKnown RBP8.21□□□□□ -1.1
EWSR1-220ENST00000493426 MTHFSP49914 203 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms