RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 USP54Q70EL1 1684 aa28.96■■■□□ 2.23
CLTA-208ENST00000493185 USP31Q70CQ4 1352 aa28.96■■■□□ 2.23
CLTA-208ENST00000493185 RGPD5Q99666 1765 aa28.96■■■□□ 2.23
CLTA-208ENST00000493185 EDC4Q6P2E9 1401 aaKnown RBP28.95■■■□□ 2.23
CLTA-208ENST00000493185 AXIN2Q9Y2T1 843 aa28.95■■■□□ 2.22
CLTA-208ENST00000493185 WDR17Q8IZU2 1322 aa28.94■■■□□ 2.22
CLTA-208ENST00000493185 NINLQ9Y2I6 1382 aa28.94■■■□□ 2.22
CLTA-208ENST00000493185 EN1Q05925 392 aaPredicted RBP28.94■■■□□ 2.22
CLTA-208ENST00000493185 NME9Q86XW9 330 aa28.94■■■□□ 2.22
CLTA-208ENST00000493185 DISP2A7MBM2 1401 aa28.94■■■□□ 2.22
CLTA-208ENST00000493185 A0A1W2PP64 1363 aa28.93■■■□□ 2.22
CLTA-208ENST00000493185 TRIM37O94972 964 aa28.93■■■□□ 2.22
CLTA-208ENST00000493185 ABCC6O95255 1503 aa28.93■■■□□ 2.22
CLTA-208ENST00000493185 CSB-PGBD3P0DP91 1061 aa28.91■■■□□ 2.22
CLTA-208ENST00000493185 USP47Q96K76 1375 aa28.9■■■□□ 2.22
CLTA-208ENST00000493185 SRCAPQ6ZRS2 3230 aa28.9■■■□□ 2.22
CLTA-208ENST00000493185 PCGF6Q9BYE7 350 aa28.89■■■□□ 2.22
CLTA-208ENST00000493185 WNK3Q9BYP7 1800 aa28.89■■■□□ 2.22
CLTA-208ENST00000493185 CLSPNQ9HAW4 1339 aa28.89■■■□□ 2.21
CLTA-208ENST00000493185 LRRC37A3O60309 1634 aa28.87■■■□□ 2.21
CLTA-208ENST00000493185 C11orf95C9JLR9 678 aaPredicted RBP28.87■■■□□ 2.21
CLTA-208ENST00000493185 TIMELESSQ9UNS1 1208 aa28.87■■■□□ 2.21
CLTA-208ENST00000493185 LTN1O94822 1766 aa28.87■■■□□ 2.21
CLTA-208ENST00000493185 DDB1Q16531 1140 aa28.86■■■□□ 2.21
CLTA-208ENST00000493185 CDCA7Q9BWT1 371 aaPredicted RBP28.86■■■□□ 2.21
CLTA-208ENST00000493185 CARD10Q9BWT7 1032 aa28.86■■■□□ 2.21
CLTA-208ENST00000493185 APBA3O96018 575 aa28.85■■■□□ 2.21
CLTA-208ENST00000493185 TMF1P82094 1093 aa28.85■■■□□ 2.21
CLTA-208ENST00000493185 OVOS2A0A0G2JMS6 1433 aa28.84■■■□□ 2.21
CLTA-208ENST00000493185 OVOS2A0A0J9YW53 1432 aa28.84■■■□□ 2.21
CLTA-208ENST00000493185 OVOS2Q6IE36 1432 aa28.84■■■□□ 2.21
CLTA-208ENST00000493185 EZH2Q15910 746 aaKnown RBP28.83■■■□□ 2.21
CLTA-208ENST00000493185 PARD3Q8TEW0 1356 aa28.83■■■□□ 2.21
CLTA-208ENST00000493185 CCDC7Q96M83 1385 aa28.82■■■□□ 2.2
CLTA-208ENST00000493185 CAMKK2Q96RR4 588 aa28.81■■■□□ 2.2
CLTA-208ENST00000493185 PSDA5PKW4 1024 aaPredicted RBP28.8■■■□□ 2.2
CLTA-208ENST00000493185 PEAK1Q9H792 1746 aa28.8■■■□□ 2.2
CLTA-208ENST00000493185 ANKRD36BQ8N2N9 1353 aa28.79■■■□□ 2.2
CLTA-208ENST00000493185 CDCA8Q53HL2 280 aa28.78■■■□□ 2.2
CLTA-208ENST00000493185 ERBB3P21860 1342 aa28.77■■■□□ 2.2
CLTA-208ENST00000493185 SBF2Q86WG5 1849 aa28.76■■■□□ 2.19
CLTA-208ENST00000493185 COG3Q96JB2 828 aa28.76■■■□□ 2.19
CLTA-208ENST00000493185 RREB1Q92766 1687 aa28.74■■■□□ 2.19
CLTA-208ENST00000493185 NLRP2Q9NX02 1062 aa28.74■■■□□ 2.19
CLTA-208ENST00000493185 EXOC5O00471 708 aa28.73■■■□□ 2.19
CLTA-208ENST00000493185 ANKRD24Q8TF21 1146 aa28.73■■■□□ 2.19
CLTA-208ENST00000493185 R3HDM1Q15032 1099 aaKnown RBP28.72■■■□□ 2.19
CLTA-208ENST00000493185 MARCH10Q8NA82 808 aaPredicted RBP28.72■■■□□ 2.19
CLTA-208ENST00000493185 LRP5O75197 1615 aa28.72■■■□□ 2.19
CLTA-208ENST00000493185 IP6K1Q92551 441 aa28.7■■■□□ 2.18
CLTA-208ENST00000493185 BCL9O00512 1426 aa28.69■■■□□ 2.18
CLTA-208ENST00000493185 TNS2Q63HR2 1409 aa28.69■■■□□ 2.18
CLTA-208ENST00000493185 NUP188Q5SRE5 1749 aa28.69■■■□□ 2.18
CLTA-208ENST00000493185 BCL11BQ9C0K0 894 aaPredicted RBP28.68■■■□□ 2.18
CLTA-208ENST00000493185 RGPD3A6NKT7 1758 aaPredicted RBP28.67■■■□□ 2.18
CLTA-208ENST00000493185 RGPD4Q7Z3J3 1758 aa28.67■■■□□ 2.18
CLTA-208ENST00000493185 FAM208AQ9UK61 1670 aaKnown RBP28.67■■■□□ 2.18
CLTA-208ENST00000493185 IL2RBP14784 551 aa28.66■■■□□ 2.18
CLTA-208ENST00000493185 NBPF14Q5TI25 921 aa28.66■■■□□ 2.18
CLTA-208ENST00000493185 CCER1Q8TC90 406 aaPredicted RBP28.65■■■□□ 2.18
CLTA-208ENST00000493185 MAP3K19Q56UN5 1328 aa28.65■■■□□ 2.18
CLTA-208ENST00000493185 AMPHP49418 695 aa28.64■■■□□ 2.18
CLTA-208ENST00000493185 FYB1O15117 783 aa28.63■■■□□ 2.17
CLTA-208ENST00000493185 PLSCR1O15162 318 aa28.63■■■□□ 2.17
CLTA-208ENST00000493185 LTV1Q96GA3 475 aaPredicted RBP28.63■■■□□ 2.17
CLTA-208ENST00000493185 GGNBP2Q9H3C7 697 aa28.63■■■□□ 2.17
CLTA-208ENST00000493185 KIF20BQ96Q89 1820 aa28.63■■■□□ 2.17
CLTA-208ENST00000493185 MYOM1P52179 1685 aa28.61■■■□□ 2.17
CLTA-208ENST00000493185 HOXC9P31274 260 aa28.61■■■□□ 2.17
CLTA-208ENST00000493185 FBLN1P23142 703 aa28.6■■■□□ 2.17
CLTA-208ENST00000493185 PTF1AQ7RTS3 328 aa28.6■■■□□ 2.17
CLTA-208ENST00000493185 RTL1A6NKG5 1358 aa28.59■■■□□ 2.17
CLTA-208ENST00000493185 RRS1Q15050 365 aaKnown RBP28.56■■■□□ 2.16
CLTA-208ENST00000493185 NHSQ6T4R5 1651 aa28.55■■■□□ 2.16
CLTA-208ENST00000493185 NSD3Q9BZ95 1437 aa28.54■■■□□ 2.16
CLTA-208ENST00000493185 KAT6BQ8WYB5 2073 aa28.54■■■□□ 2.16
CLTA-208ENST00000493185 CARD14Q9BXL6 1004 aa28.53■■■□□ 2.16
CLTA-208ENST00000493185 RGPD2P0DJD1 1756 aa28.52■■■□□ 2.16
CLTA-208ENST00000493185 EIF4G2P78344 907 aaKnown RBP eCLIP28.52■■■□□ 2.16
CLTA-208ENST00000493185 KCNQ2O43526 872 aa28.51■■■□□ 2.15
CLTA-208ENST00000493185 ACSBG1Q96GR2 724 aa28.51■■■□□ 2.15
CLTA-208ENST00000493185 SMG6Q86US8 1419 aaKnown RBP28.51■■■□□ 2.15
CLTA-208ENST00000493185 POLR3GLQ9BT43 218 aa28.5■■■□□ 2.15
CLTA-208ENST00000493185 DDX54Q8TDD1 881 aaKnown RBP28.48■■■□□ 2.15
CLTA-208ENST00000493185 KIF24Q5T7B8 1368 aa28.48■■■□□ 2.15
CLTA-208ENST00000493185 TXNRD1Q16881 649 aa28.47■■■□□ 2.15
CLTA-208ENST00000493185 PROM2Q8N271 834 aa28.47■■■□□ 2.15
CLTA-208ENST00000493185 FLT4P35916 1363 aa28.47■■■□□ 2.15
CLTA-208ENST00000493185 BTAF1O14981 1849 aa28.46■■■□□ 2.15
CLTA-208ENST00000493185 CGNL1Q0VF96 1302 aa28.45■■■□□ 2.15
CLTA-208ENST00000493185 HSPA5P11021 654 aaKnown RBP28.45■■■□□ 2.14
CLTA-208ENST00000493185 ANO8Q9HCE9 1232 aaPredicted RBP28.45■■■□□ 2.14
CLTA-208ENST00000493185 INSRP06213 1382 aa28.45■■■□□ 2.14
CLTA-208ENST00000493185 HSP90AB2PQ58FF8 381 aa28.43■■■□□ 2.14
CLTA-208ENST00000493185 NBPF6Q5VWK0 638 aa28.43■■■□□ 2.14
CLTA-208ENST00000493185 NBPF4Q96M43 638 aa28.43■■■□□ 2.14
CLTA-208ENST00000493185 MEGF6O75095 1541 aa28.43■■■□□ 2.14
CLTA-208ENST00000493185 ZCRB1Q8TBF4 217 aaKnown RBP28.42■■■□□ 2.14
CLTA-208ENST00000493185 USHBP1Q8N6Y0 703 aa28.4■■■□□ 2.14
CLTA-208ENST00000493185 RAPGEF4Q8WZA2 1011 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms