RNA–Protein interactions for RNA: ENST00000492983.1

ATP13A3-209, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-209ENST00000492983 KCTD17Q8N5Z5 321 aa8.58□□□□□ -1.04
ATP13A3-209ENST00000492983 TRIM34Q9BYJ4 488 aa8.58□□□□□ -1.04
ATP13A3-209ENST00000492983 WASF2Q9Y6W5 498 aa8.58□□□□□ -1.04
ATP13A3-209ENST00000492983 SOCS7O14512 581 aa8.57□□□□□ -1.04
ATP13A3-209ENST00000492983 NR6A1Q15406 480 aa8.57□□□□□ -1.04
ATP13A3-209ENST00000492983 MRPL14Q6P1L8 145 aaKnown RBP8.56□□□□□ -1.04
ATP13A3-209ENST00000492983 MPNDQ8N594 471 aa8.56□□□□□ -1.04
ATP13A3-209ENST00000492983 NUDT12Q9BQG2 462 aa8.56□□□□□ -1.04
ATP13A3-209ENST00000492983 POM121CA8CG34 1229 aa8.55□□□□□ -1.04
ATP13A3-209ENST00000492983 KLF16Q9BXK1 252 aaPredicted RBP8.55□□□□□ -1.04
ATP13A3-209ENST00000492983 DESI1Q6ICB0 168 aa8.54□□□□□ -1.04
ATP13A3-209ENST00000492983 LYPD8Q6UX82 237 aa8.54□□□□□ -1.04
ATP13A3-209ENST00000492983 TLL2Q9Y6L7 1015 aa8.54□□□□□ -1.04
ATP13A3-209ENST00000492983 SOBPA7XYQ1 873 aa8.53□□□□□ -1.04
ATP13A3-209ENST00000492983 TIMP2P16035 220 aa8.53□□□□□ -1.04
ATP13A3-209ENST00000492983 IRF5Q13568 498 aa8.53□□□□□ -1.04
ATP13A3-209ENST00000492983 CCDC97Q96F63 343 aaPredicted RBP8.53□□□□□ -1.04
ATP13A3-209ENST00000492983 CTHP32929 405 aa8.51□□□□□ -1.05
ATP13A3-209ENST00000492983 VAC14Q08AM6 782 aa8.51□□□□□ -1.05
ATP13A3-209ENST00000492983 NNTQ13423 1086 aa8.51□□□□□ -1.05
ATP13A3-209ENST00000492983 CALR3Q96L12 384 aaKnown RBP8.51□□□□□ -1.05
ATP13A3-209ENST00000492983 GPR37L1O60883 481 aa8.5□□□□□ -1.05
ATP13A3-209ENST00000492983 PURBQ96QR8 312 aaKnown RBP8.5□□□□□ -1.05
ATP13A3-209ENST00000492983 MAP10Q9P2G4 905 aa8.5□□□□□ -1.05
ATP13A3-209ENST00000492983 CCNYL3P0C7X3 344 aa8.49□□□□□ -1.05
ATP13A3-209ENST00000492983 RASSF7Q02833 373 aa8.49□□□□□ -1.05
ATP13A3-209ENST00000492983 WASHC4Q2M389 1173 aa8.49□□□□□ -1.05
ATP13A3-209ENST00000492983 TMEM151AQ8N4L1 468 aa8.49□□□□□ -1.05
ATP13A3-209ENST00000492983 GLMNQ92990 594 aa8.49□□□□□ -1.05
ATP13A3-209ENST00000492983 SERPINA10Q9UK55 444 aa8.49□□□□□ -1.05
ATP13A3-209ENST00000492983 ADH1CP00326 375 aa8.48□□□□□ -1.05
ATP13A3-209ENST00000492983 KRT76Q01546 638 aa8.48□□□□□ -1.05
ATP13A3-209ENST00000492983 PTPRNQ16849 979 aa8.48□□□□□ -1.05
ATP13A3-209ENST00000492983 VARSP26640 1264 aaKnown RBP8.47□□□□□ -1.05
ATP13A3-209ENST00000492983 SCARF1Q14162 830 aa8.47□□□□□ -1.05
ATP13A3-209ENST00000492983 HDGFL1Q5TGJ6 251 aa8.47□□□□□ -1.05
ATP13A3-209ENST00000492983 PNMA1Q8ND90 353 aa8.47□□□□□ -1.05
ATP13A3-209ENST00000492983 UNC93B1Q9H1C4 597 aa8.47□□□□□ -1.05
ATP13A3-209ENST00000492983 PPFIA3O75145 1194 aa8.46□□□□□ -1.06
ATP13A3-209ENST00000492983 GDF11O95390 407 aa8.46□□□□□ -1.06
ATP13A3-209ENST00000492983 F12P00748 615 aaPredicted RBP8.46□□□□□ -1.06
ATP13A3-209ENST00000492983 ZNF511Q8NB15 262 aa8.46□□□□□ -1.06
ATP13A3-209ENST00000492983 EVA1BQ9NVM1 165 aa8.46□□□□□ -1.06
ATP13A3-209ENST00000492983 WDR4P57081 412 aaKnown RBP8.45□□□□□ -1.06
ATP13A3-209ENST00000492983 LINC01559Q495D7 138 aa8.45□□□□□ -1.06
ATP13A3-209ENST00000492983 BAP1Q92560 729 aa8.45□□□□□ -1.06
ATP13A3-209ENST00000492983 FKBPLQ9UIM3 349 aa8.45□□□□□ -1.06
ATP13A3-209ENST00000492983 ADAMTS19Q8TE59 1207 aa8.44□□□□□ -1.06
ATP13A3-209ENST00000492983 KCNH2Q12809 1159 aa8.43□□□□□ -1.06
ATP13A3-209ENST00000492983 CDK15Q96Q40 435 aa8.42□□□□□ -1.06
ATP13A3-209ENST00000492983 ADAMTS8Q9UP79 889 aa8.42□□□□□ -1.06
ATP13A3-209ENST00000492983 FBXO45P0C2W1 286 aa8.41□□□□□ -1.06
ATP13A3-209ENST00000492983 SEMA3FQ13275 785 aa8.41□□□□□ -1.06
ATP13A3-209ENST00000492983 GPR161Q8N6U8 529 aaKnown RBP8.41□□□□□ -1.06
ATP13A3-209ENST00000492983 ZFAND3Q9H8U3 227 aa8.41□□□□□ -1.06
ATP13A3-209ENST00000492983 ZBBXA8MT70 800 aa8.4□□□□□ -1.06
ATP13A3-209ENST00000492983 RNF225M0QZC1 329 aaPredicted RBP8.4□□□□□ -1.06
ATP13A3-209ENST00000492983 NR1H3Q13133 447 aa8.4□□□□□ -1.06
ATP13A3-209ENST00000492983 MAN1A2O60476 641 aa8.39□□□□□ -1.07
ATP13A3-209ENST00000492983 NR3C2P08235 984 aa8.39□□□□□ -1.07
ATP13A3-209ENST00000492983 RFX1P22670 979 aa8.39□□□□□ -1.07
ATP13A3-209ENST00000492983 EIF4G2P78344 907 aaKnown RBP eCLIP8.39□□□□□ -1.07
ATP13A3-209ENST00000492983 ITPKCQ96DU7 683 aa8.39□□□□□ -1.07
ATP13A3-209ENST00000492983 ALG2Q9H553 416 aa8.39□□□□□ -1.07
ATP13A3-209ENST00000492983 SOS2Q07890 1332 aaPredicted RBP8.38□□□□□ -1.07
ATP13A3-209ENST00000492983 ZIC2O95409 532 aaPredicted RBP8.38□□□□□ -1.07
ATP13A3-209ENST00000492983 ARMC2Q8NEN0 867 aa8.38□□□□□ -1.07
ATP13A3-209ENST00000492983 DNMT3LQ9UJW3 386 aa8.38□□□□□ -1.07
ATP13A3-209ENST00000492983 ZC3H4Q9UPT8 1303 aaKnown RBP8.37□□□□□ -1.07
ATP13A3-209ENST00000492983 ZNF385CQ66K41 422 aaPredicted RBP8.37□□□□□ -1.07
ATP13A3-209ENST00000492983 MEIOBQ8N635 442 aa8.37□□□□□ -1.07
ATP13A3-209ENST00000492983 DNMT3AQ9Y6K1 912 aaPredicted RBP8.37□□□□□ -1.07
ATP13A3-209ENST00000492983 SOX11P35716 441 aa8.36□□□□□ -1.07
ATP13A3-209ENST00000492983 PTK2Q05397 1052 aa8.36□□□□□ -1.07
ATP13A3-209ENST00000492983 NBPF14Q5TI25 921 aa8.36□□□□□ -1.07
ATP13A3-209ENST00000492983 FAM174AQ8TBP5 190 aa8.36□□□□□ -1.07
ATP13A3-209ENST00000492983 C6orf118Q5T5N4 469 aa8.35□□□□□ -1.07
ATP13A3-209ENST00000492983 PDXDC2PQ6P474 469 aa8.35□□□□□ -1.07
ATP13A3-209ENST00000492983 LINC00528Q8N1L1 170 aa8.35□□□□□ -1.07
ATP13A3-209ENST00000492983 CNTNAP3BQ96NU0 1288 aa8.35□□□□□ -1.07
ATP13A3-209ENST00000492983 CNTNAP3Q9BZ76 1288 aa8.35□□□□□ -1.07
ATP13A3-209ENST00000492983 PPP1R12CQ9BZL4 782 aa8.35□□□□□ -1.07
ATP13A3-209ENST00000492983 PCDHB9Q9Y5E1 797 aa8.35□□□□□ -1.07
ATP13A3-209ENST00000492983 ARHGEF15O94989 841 aa8.34□□□□□ -1.07
ATP13A3-209ENST00000492983 IGHA1P01876 353 aa8.34□□□□□ -1.07
ATP13A3-209ENST00000492983 NANOS1Q8WY41 292 aaKnown RBP8.34□□□□□ -1.07
ATP13A3-209ENST00000492983 ARHGAP9Q9BRR9 750 aa8.34□□□□□ -1.07
ATP13A3-209ENST00000492983 CARD14Q9BXL6 1004 aa8.34□□□□□ -1.07
ATP13A3-209ENST00000492983 TFIP11Q9UBB9 837 aaKnown RBP8.34□□□□□ -1.07
ATP13A3-209ENST00000492983 MAGEB6P1A0A0J9YX57 407 aa8.33□□□□□ -1.08
ATP13A3-209ENST00000492983 PALM3A6NDB9 673 aaPredicted RBP8.33□□□□□ -1.08
ATP13A3-209ENST00000492983 LMOD1P29536 600 aaPredicted RBP8.33□□□□□ -1.08
ATP13A3-209ENST00000492983 GRM5P41594 1212 aa8.33□□□□□ -1.08
ATP13A3-209ENST00000492983 NR5A1Q13285 461 aa8.33□□□□□ -1.08
ATP13A3-209ENST00000492983 AGERQ15109 404 aa8.33□□□□□ -1.08
ATP13A3-209ENST00000492983 XP32Q5T750 250 aa8.33□□□□□ -1.08
ATP13A3-209ENST00000492983 ZBTB33Q86T24 672 aa8.33□□□□□ -1.08
ATP13A3-209ENST00000492983 GPKOWQ92917 476 aaPredicted RBP eCLIP8.33□□□□□ -1.08
ATP13A3-209ENST00000492983 UCN2Q96RP3 112 aa8.33□□□□□ -1.08
ATP13A3-209ENST00000492983 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms