RNA–Protein interactions for RNA: ENST00000492692.1

CSMD3-206, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 1,830 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-206ENST00000492692 PAXBP1Q9Y5B6 917 aa13.47□□□□□ -0.25
CSMD3-206ENST00000492692 EIF3AQ14152 1382 aaKnown RBP13.47□□□□□ -0.25
CSMD3-206ENST00000492692 CCDC196A0A1B0GTZ2 297 aa13.46□□□□□ -0.25
CSMD3-206ENST00000492692 TSGA10IPQ3SY00 556 aa13.46□□□□□ -0.25
CSMD3-206ENST00000492692 TXLNBQ8N3L3 684 aa13.46□□□□□ -0.25
CSMD3-206ENST00000492692 ATG3Q9NT62 314 aa13.46□□□□□ -0.25
CSMD3-206ENST00000492692 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.46□□□□□ -0.25
CSMD3-206ENST00000492692 ITSN2Q9NZM3 1697 aa13.46□□□□□ -0.25
CSMD3-206ENST00000492692 LAMC1P11047 1609 aa13.46□□□□□ -0.26
CSMD3-206ENST00000492692 ATP6V1AP38606 617 aa13.46□□□□□ -0.26
CSMD3-206ENST00000492692 CALR3Q96L12 384 aaKnown RBP13.46□□□□□ -0.26
CSMD3-206ENST00000492692 RBSNQ9H1K0 784 aa13.46□□□□□ -0.26
CSMD3-206ENST00000492692 POLKQ9UBT6 870 aa13.46□□□□□ -0.26
CSMD3-206ENST00000492692 PDS5BQ9NTI5 1447 aa13.45□□□□□ -0.26
CSMD3-206ENST00000492692 KDM5DQ9BY66 1539 aa13.45□□□□□ -0.26
CSMD3-206ENST00000492692 ERICH4A6NGS2 130 aa13.45□□□□□ -0.26
CSMD3-206ENST00000492692 CTAGE5O15320 804 aa13.45□□□□□ -0.26
CSMD3-206ENST00000492692 SEC24BO95487 1268 aa13.45□□□□□ -0.26
CSMD3-206ENST00000492692 NCBP1Q09161 790 aaKnown RBP13.45□□□□□ -0.26
CSMD3-206ENST00000492692 SETDB1Q15047 1291 aa13.45□□□□□ -0.26
CSMD3-206ENST00000492692 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.45□□□□□ -0.26
CSMD3-206ENST00000492692 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.45□□□□□ -0.26
CSMD3-206ENST00000492692 IQGAP2Q13576 1575 aa13.44□□□□□ -0.26
CSMD3-206ENST00000492692 ANKRD33BA6NCL7 494 aa13.44□□□□□ -0.26
CSMD3-206ENST00000492692 MYO1CO00159 1063 aa13.44□□□□□ -0.26
CSMD3-206ENST00000492692 CCDC96Q2M329 555 aa13.44□□□□□ -0.26
CSMD3-206ENST00000492692 ZC3H12AQ5D1E8 599 aaKnown RBP13.44□□□□□ -0.26
CSMD3-206ENST00000492692 DNAJC21Q5F1R6 531 aaKnown RBP13.43□□□□□ -0.26
CSMD3-206ENST00000492692 SNX21Q969T3 373 aa13.43□□□□□ -0.26
CSMD3-206ENST00000492692 TACO1Q9BSH4 297 aaKnown RBP13.43□□□□□ -0.26
CSMD3-206ENST00000492692 CARD11Q9BXL7 1154 aa13.43□□□□□ -0.26
CSMD3-206ENST00000492692 CDK13Q14004 1512 aaKnown RBP13.43□□□□□ -0.26
CSMD3-206ENST00000492692 CLASP1Q7Z460 1538 aa13.43□□□□□ -0.26
CSMD3-206ENST00000492692 CEP170Q5SW79 1584 aa13.43□□□□□ -0.26
CSMD3-206ENST00000492692 RIOK3O14730 519 aaKnown RBP13.43□□□□□ -0.26
CSMD3-206ENST00000492692 NEFHP12036 1026 aa13.43□□□□□ -0.26
CSMD3-206ENST00000492692 RGL3Q3MIN7 710 aa13.43□□□□□ -0.26
CSMD3-206ENST00000492692 NOM1Q5C9Z4 860 aaKnown RBP13.43□□□□□ -0.26
CSMD3-206ENST00000492692 KIF1BPQ96EK5 621 aa13.43□□□□□ -0.26
CSMD3-206ENST00000492692 CEP89Q96ST8 783 aa13.43□□□□□ -0.26
CSMD3-206ENST00000492692 PAIP2Q9BPZ3 127 aaKnown RBP13.43□□□□□ -0.26
CSMD3-206ENST00000492692 NOL10Q9BSC4 688 aaKnown RBP13.43□□□□□ -0.26
CSMD3-206ENST00000492692 CWC15Q9P013 229 aaKnown RBP13.43□□□□□ -0.26
CSMD3-206ENST00000492692 MPHOSPH10O00566 681 aaKnown RBP13.42□□□□□ -0.26
CSMD3-206ENST00000492692 NRDCO43847 1150 aa13.42□□□□□ -0.26
CSMD3-206ENST00000492692 RABEP1Q15276 862 aa13.42□□□□□ -0.26
CSMD3-206ENST00000492692 HSCBQ8IWL3 235 aa13.42□□□□□ -0.26
CSMD3-206ENST00000492692 ZNF446Q9NWS9 450 aa13.42□□□□□ -0.26
CSMD3-206ENST00000492692 ZNF608Q9ULD9 1512 aaPredicted RBP13.42□□□□□ -0.26
CSMD3-206ENST00000492692 TTC31Q49AM3 519 aaPredicted RBP13.41□□□□□ -0.26
CSMD3-206ENST00000492692 MCTP2Q6DN12 878 aa13.41□□□□□ -0.26
CSMD3-206ENST00000492692 COQ9O75208 318 aa13.4□□□□□ -0.26
CSMD3-206ENST00000492692 BIRC2Q13490 618 aa13.4□□□□□ -0.26
CSMD3-206ENST00000492692 ZSCAN23Q3MJ62 389 aa13.4□□□□□ -0.26
CSMD3-206ENST00000492692 SLFNL1Q499Z3 407 aa13.4□□□□□ -0.26
CSMD3-206ENST00000492692 MAP9Q49MG5 647 aa13.4□□□□□ -0.26
CSMD3-206ENST00000492692 TSHZ1Q6ZSZ6 1077 aa13.4□□□□□ -0.26
CSMD3-206ENST00000492692 ZNF513Q8N8E2 541 aaPredicted RBP13.4□□□□□ -0.26
CSMD3-206ENST00000492692 ZNF397Q8NF99 534 aaPredicted RBP13.4□□□□□ -0.26
CSMD3-206ENST00000492692 CDCA7LQ96GN5 454 aa13.4□□□□□ -0.26
CSMD3-206ENST00000492692 TRERF1Q96PN7 1200 aa13.4□□□□□ -0.26
CSMD3-206ENST00000492692 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
CSMD3-206ENST00000492692 YEATS2Q9ULM3 1422 aa13.4□□□□□ -0.27
CSMD3-206ENST00000492692 PER1O15534 1290 aaPredicted RBP13.39□□□□□ -0.27
CSMD3-206ENST00000492692 NFATC2IPQ8NCF5 419 aa13.39□□□□□ -0.27
CSMD3-206ENST00000492692 TMX1Q9H3N1 280 aa13.39□□□□□ -0.27
CSMD3-206ENST00000492692 TRPM1Q7Z4N2 1603 aa13.39□□□□□ -0.27
CSMD3-206ENST00000492692 ST20-MTHFSA0A0A6YYL1 179 aa13.39□□□□□ -0.27
CSMD3-206ENST00000492692 DRC1Q96MC2 740 aa13.39□□□□□ -0.27
CSMD3-206ENST00000492692 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.39□□□□□ -0.27
CSMD3-206ENST00000492692 DDX49Q9Y6V7 483 aaKnown RBP13.39□□□□□ -0.27
CSMD3-206ENST00000492692 PLEKHG2Q9H7P9 1386 aa13.38□□□□□ -0.27
CSMD3-206ENST00000492692 ADCY10Q96PN6 1610 aa13.38□□□□□ -0.27
CSMD3-206ENST00000492692 PLIN1O60240 522 aa13.38□□□□□ -0.27
CSMD3-206ENST00000492692 IPO7O95373 1038 aaKnown RBP13.38□□□□□ -0.27
CSMD3-206ENST00000492692 SRPK2P78362 688 aaKnown RBP13.38□□□□□ -0.27
CSMD3-206ENST00000492692 SYT10Q6XYQ8 523 aa13.38□□□□□ -0.27
CSMD3-206ENST00000492692 IQUBQ8NA54 791 aa13.38□□□□□ -0.27
CSMD3-206ENST00000492692 TOMM22Q9NS69 142 aa13.38□□□□□ -0.27
CSMD3-206ENST00000492692 ANKRD30AQ9BXX3 1397 aa13.38□□□□□ -0.27
CSMD3-206ENST00000492692 CAMSAP2Q08AD1 1489 aa13.38□□□□□ -0.27
CSMD3-206ENST00000492692 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
CSMD3-206ENST00000492692 KIAA0586Q9BVV6 1533 aa13.38□□□□□ -0.27
CSMD3-206ENST00000492692 MAGEA9P43362 315 aa13.37□□□□□ -0.27
CSMD3-206ENST00000492692 PKD2Q13563 968 aa13.37□□□□□ -0.27
CSMD3-206ENST00000492692 LRSAM1Q6UWE0 723 aa13.37□□□□□ -0.27
CSMD3-206ENST00000492692 SHANK2Q9UPX8 1470 aa13.37□□□□□ -0.27
CSMD3-206ENST00000492692 H0YHG0 523 aa13.36□□□□□ -0.27
CSMD3-206ENST00000492692 MAP2K2P36507 400 aa13.36□□□□□ -0.27
CSMD3-206ENST00000492692 GYS2P54840 703 aa13.36□□□□□ -0.27
CSMD3-206ENST00000492692 IRX1P78414 480 aaPredicted RBP13.36□□□□□ -0.27
CSMD3-206ENST00000492692 SARNPP82979 210 aaKnown RBP13.36□□□□□ -0.27
CSMD3-206ENST00000492692 SRLQ86TD4 932 aa13.36□□□□□ -0.27
CSMD3-206ENST00000492692 ANKRD20A12PQ8NF67 263 aa13.36□□□□□ -0.27
CSMD3-206ENST00000492692 GPRASP1Q5JY77 1395 aa13.36□□□□□ -0.27
CSMD3-206ENST00000492692 COL17A1Q9UMD9 1497 aaPredicted RBP13.36□□□□□ -0.27
CSMD3-206ENST00000492692 FAM177BA6PVY3 158 aa13.36□□□□□ -0.27
CSMD3-206ENST00000492692 TPM3P06753 285 aa13.36□□□□□ -0.27
CSMD3-206ENST00000492692 C10orf67Q8IYJ2 551 aa13.36□□□□□ -0.27
CSMD3-206ENST00000492692 ZNF526Q8TF50 670 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms