RNA–Protein interactions for RNA: ENST00000492403.1

EPHB4-208, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-208ENST00000492403 PCMTD1Q96MG8 357 aaPredicted RBP14.44□□□□□ -0.1
EPHB4-208ENST00000492403 C8orf37Q96NL8 207 aa14.44□□□□□ -0.1
EPHB4-208ENST00000492403 NHSL1Q5SYE7 1610 aa14.44□□□□□ -0.1
EPHB4-208ENST00000492403 HIC1Q14526 733 aa14.43□□□□□ -0.1
EPHB4-208ENST00000492403 CCDC82Q8N4S0 544 aa14.43□□□□□ -0.1
EPHB4-208ENST00000492403 DDX17Q92841 729 aaKnown RBP14.43□□□□□ -0.1
EPHB4-208ENST00000492403 NGLY1Q96IV0 654 aa14.43□□□□□ -0.1
EPHB4-208ENST00000492403 ROBO2Q9HCK4 1378 aa14.43□□□□□ -0.1
EPHB4-208ENST00000492403 C1orf167Q5SNV9 1468 aa14.43□□□□□ -0.1
EPHB4-208ENST00000492403 TRAK2O60296 914 aa14.42□□□□□ -0.1
EPHB4-208ENST00000492403 FCHSD2O94868 740 aa14.42□□□□□ -0.1
EPHB4-208ENST00000492403 CLUAP1Q96AJ1 413 aa14.42□□□□□ -0.1
EPHB4-208ENST00000492403 TRPC6Q9Y210 931 aa14.42□□□□□ -0.1
EPHB4-208ENST00000492403 AFF2P51816 1311 aa14.41□□□□□ -0.1
EPHB4-208ENST00000492403 ADGRF5Q8IZF2 1346 aa14.41□□□□□ -0.1
EPHB4-208ENST00000492403 LRP6O75581 1613 aa14.41□□□□□ -0.1
EPHB4-208ENST00000492403 ADAMTS2O95450 1211 aa14.41□□□□□ -0.1
EPHB4-208ENST00000492403 ORAI2Q96SN7 254 aa14.41□□□□□ -0.1
EPHB4-208ENST00000492403 LRPPRCP42704 1394 aaKnown RBP14.41□□□□□ -0.1
EPHB4-208ENST00000492403 NPHP3Q7Z494 1330 aa14.41□□□□□ -0.1
EPHB4-208ENST00000492403 CD44P16070 742 aaKnown RBP14.4□□□□□ -0.1
EPHB4-208ENST00000492403 MAP3K9P80192 1104 aa14.4□□□□□ -0.1
EPHB4-208ENST00000492403 TMEM132EQ6IEE7 984 aa14.39□□□□□ -0.11
EPHB4-208ENST00000492403 PLPP6Q8IY26 295 aa14.39□□□□□ -0.11
EPHB4-208ENST00000492403 PNPLA6Q8IY17 1366 aa14.38□□□□□ -0.11
EPHB4-208ENST00000492403 OSBPP22059 807 aa14.38□□□□□ -0.11
EPHB4-208ENST00000492403 FECHP22830 423 aa14.38□□□□□ -0.11
EPHB4-208ENST00000492403 WAPLQ7Z5K2 1190 aa14.38□□□□□ -0.11
EPHB4-208ENST00000492403 QTRT2Q9H974 415 aaKnown RBP14.38□□□□□ -0.11
EPHB4-208ENST00000492403 CCDC9Q9Y3X0 531 aaKnown RBP14.38□□□□□ -0.11
EPHB4-208ENST00000492403 MS4A3Q96HJ5 214 aa14.37□□□□□ -0.11
EPHB4-208ENST00000492403 POGKQ9P215 609 aa14.37□□□□□ -0.11
EPHB4-208ENST00000492403 IFT172Q9UG01 1749 aa14.36□□□□□ -0.11
EPHB4-208ENST00000492403 MICALL2Q8IY33 904 aa14.36□□□□□ -0.11
EPHB4-208ENST00000492403 CDC42BPGQ6DT37 1551 aa14.35□□□□□ -0.11
EPHB4-208ENST00000492403 SPATA31E1Q6ZUB1 1445 aa14.35□□□□□ -0.11
EPHB4-208ENST00000492403 PRAG1Q86YV5 1406 aa14.35□□□□□ -0.11
EPHB4-208ENST00000492403 FOXO3O43524 673 aa14.35□□□□□ -0.11
EPHB4-208ENST00000492403 RBM6P78332 1123 aaKnown RBP14.35□□□□□ -0.11
EPHB4-208ENST00000492403 GIGYF2Q6Y7W6 1299 aaKnown RBP14.35□□□□□ -0.11
EPHB4-208ENST00000492403 SOS2Q07890 1332 aaPredicted RBP14.35□□□□□ -0.11
EPHB4-208ENST00000492403 ABCC11Q96J66 1382 aa14.34□□□□□ -0.11
EPHB4-208ENST00000492403 USP21Q9UK80 565 aa14.34□□□□□ -0.11
EPHB4-208ENST00000492403 LAMC1P11047 1609 aa14.33□□□□□ -0.11
EPHB4-208ENST00000492403 YTHDC2Q9H6S0 1430 aaKnown RBP14.33□□□□□ -0.11
EPHB4-208ENST00000492403 MS4A1P11836 297 aa14.33□□□□□ -0.12
EPHB4-208ENST00000492403 PSME1Q06323 249 aa14.33□□□□□ -0.12
EPHB4-208ENST00000492403 PIK3C2GO75747 1445 aa14.32□□□□□ -0.12
EPHB4-208ENST00000492403 KNDC1Q76NI1 1749 aa14.32□□□□□ -0.12
EPHB4-208ENST00000492403 XPCQ01831 940 aaPredicted RBP14.32□□□□□ -0.12
EPHB4-208ENST00000492403 SAFB2Q14151 953 aaKnown RBP eCLIP14.32□□□□□ -0.12
EPHB4-208ENST00000492403 MCM6Q14566 821 aa14.32□□□□□ -0.12
EPHB4-208ENST00000492403 CFAP70Q5T0N1 1121 aa14.32□□□□□ -0.12
EPHB4-208ENST00000492403 DPY19L2Q6NUT2 758 aa14.32□□□□□ -0.12
EPHB4-208ENST00000492403 C14orf93Q9H972 538 aaKnown RBP14.32□□□□□ -0.12
EPHB4-208ENST00000492403 TRPC5Q9UL62 973 aaPredicted RBP14.32□□□□□ -0.12
EPHB4-208ENST00000492403 TIE1P35590 1138 aa14.31□□□□□ -0.12
EPHB4-208ENST00000492403 NEUROD1Q13562 356 aa14.31□□□□□ -0.12
EPHB4-208ENST00000492403 SIRT1Q96EB6 747 aa14.31□□□□□ -0.12
EPHB4-208ENST00000492403 TONSLQ96HA7 1378 aa14.31□□□□□ -0.12
EPHB4-208ENST00000492403 TECPR2O15040 1411 aa14.31□□□□□ -0.12
EPHB4-208ENST00000492403 CDK12Q9NYV4 1490 aaPredicted RBP14.31□□□□□ -0.12
EPHB4-208ENST00000492403 TTLL13PA6NNM8 815 aa14.3□□□□□ -0.12
EPHB4-208ENST00000492403 PIP4P2Q8N4L2 257 aa14.3□□□□□ -0.12
EPHB4-208ENST00000492403 DCAF11Q8TEB1 546 aa14.3□□□□□ -0.12
EPHB4-208ENST00000492403 PRAM1Q96QH2 718 aa14.3□□□□□ -0.12
EPHB4-208ENST00000492403 KRT28Q7Z3Y7 464 aa14.29□□□□□ -0.12
EPHB4-208ENST00000492403 DDX12PQ92771 950 aa14.29□□□□□ -0.12
EPHB4-208ENST00000492403 UPF1Q92900 1129 aaKnown RBP eCLIP14.29□□□□□ -0.12
EPHB4-208ENST00000492403 STAC3Q96MF2 364 aa14.29□□□□□ -0.12
EPHB4-208ENST00000492403 MYOM2P54296 1465 aa14.29□□□□□ -0.12
EPHB4-208ENST00000492403 KIF1AQ12756 1690 aa14.29□□□□□ -0.12
EPHB4-208ENST00000492403 SH3D19Q5HYK7 790 aa14.28□□□□□ -0.12
EPHB4-208ENST00000492403 NECTIN2Q92692 538 aa14.28□□□□□ -0.12
EPHB4-208ENST00000492403 FMN2Q9NZ56 1722 aa14.27□□□□□ -0.12
EPHB4-208ENST00000492403 PLEKHH1Q9ULM0 1364 aa14.27□□□□□ -0.12
EPHB4-208ENST00000492403 C2orf72A6NCS6 295 aa14.27□□□□□ -0.13
EPHB4-208ENST00000492403 CENPBP07199 599 aaPredicted RBP14.27□□□□□ -0.13
EPHB4-208ENST00000492403 TRAK1Q9UPV9 953 aa14.27□□□□□ -0.13
EPHB4-208ENST00000492403 EIF3AQ14152 1382 aaKnown RBP14.26□□□□□ -0.13
EPHB4-208ENST00000492403 PTGER2P43116 358 aa14.26□□□□□ -0.13
EPHB4-208ENST00000492403 COL22A1Q8NFW1 1626 aaPredicted RBP14.26□□□□□ -0.13
EPHB4-208ENST00000492403 PXDNQ92626 1479 aa14.25□□□□□ -0.13
EPHB4-208ENST00000492403 ATAD2Q6PL18 1390 aa14.24□□□□□ -0.13
EPHB4-208ENST00000492403 PTGDRQ13258 359 aa14.24□□□□□ -0.13
EPHB4-208ENST00000492403 FNBP4Q8N3X1 1017 aaPredicted RBP14.24□□□□□ -0.13
EPHB4-208ENST00000492403 SPATA31A3Q5VYP0 1347 aa14.23□□□□□ -0.13
EPHB4-208ENST00000492403 PMFBP1Q8TBY8 1022 aa14.23□□□□□ -0.13
EPHB4-208ENST00000492403 REPIN1Q9BWE0 567 aaKnown RBP14.23□□□□□ -0.13
EPHB4-208ENST00000492403 MARF1Q9Y4F3 1742 aaKnown RBP14.23□□□□□ -0.13
EPHB4-208ENST00000492403 GPRASP1Q5JY77 1395 aa14.22□□□□□ -0.13
EPHB4-208ENST00000492403 SIN3AQ96ST3 1273 aa14.22□□□□□ -0.13
EPHB4-208ENST00000492403 HIRIP3Q9BW71 556 aaPredicted RBP14.22□□□□□ -0.13
EPHB4-208ENST00000492403 TRIM35Q9UPQ4 493 aa14.22□□□□□ -0.13
EPHB4-208ENST00000492403 NRXN1Q9ULB1 1477 aa14.22□□□□□ -0.13
EPHB4-208ENST00000492403 RGS12O14924 1447 aa14.22□□□□□ -0.13
EPHB4-208ENST00000492403 RGPD8O14715 1765 aaPredicted RBP14.22□□□□□ -0.13
EPHB4-208ENST00000492403 KIF3CO14782 793 aa14.21□□□□□ -0.13
EPHB4-208ENST00000492403 NGDNQ8NEJ9 315 aaKnown RBP14.21□□□□□ -0.13
EPHB4-208ENST00000492403 CCDC97Q96F63 343 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms