RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 USP32Q8NFA0 1604 aa13.37□□□□□ -0.27
SNED1-211ENST00000491761 CCDC61Q9Y6R9 512 aa13.37□□□□□ -0.27
SNED1-211ENST00000491761 IFT57Q9NWB7 429 aa13.36□□□□□ -0.27
SNED1-211ENST00000491761 TWISTNBQ3B726 338 aaPredicted RBP13.36□□□□□ -0.27
SNED1-211ENST00000491761 FOXD4L6Q3SYB3 417 aaPredicted RBP13.36□□□□□ -0.27
SNED1-211ENST00000491761 FOXD4L3Q6VB84 417 aaPredicted RBP13.36□□□□□ -0.27
SNED1-211ENST00000491761 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
SNED1-211ENST00000491761 RSPH6AQ9H0K4 717 aa13.35□□□□□ -0.27
SNED1-211ENST00000491761 CHD1LQ86WJ1 897 aa13.35□□□□□ -0.27
SNED1-211ENST00000491761 GCC1Q96CN9 775 aa13.35□□□□□ -0.27
SNED1-211ENST00000491761 TBC1D2Q9BYX2 928 aa13.35□□□□□ -0.27
SNED1-211ENST00000491761 SMC5Q8IY18 1101 aa13.34□□□□□ -0.27
SNED1-211ENST00000491761 ZBTB40Q9NUA8 1239 aa13.34□□□□□ -0.27
SNED1-211ENST00000491761 CHMP5Q9NZZ3 219 aa13.34□□□□□ -0.27
SNED1-211ENST00000491761 NAP1L2Q9ULW6 460 aaPredicted RBP13.34□□□□□ -0.27
SNED1-211ENST00000491761 RRS1Q15050 365 aaKnown RBP13.34□□□□□ -0.27
SNED1-211ENST00000491761 ZC3H13Q5T200 1668 aaKnown RBP13.34□□□□□ -0.27
SNED1-211ENST00000491761 USP19O94966 1318 aa13.33□□□□□ -0.27
SNED1-211ENST00000491761 PIK3C2BO00750 1634 aa13.33□□□□□ -0.27
SNED1-211ENST00000491761 CFAP44Q96MT7 982 aa13.33□□□□□ -0.28
SNED1-211ENST00000491761 HSP90AA2PQ14568 343 aaPredicted RBP13.33□□□□□ -0.28
SNED1-211ENST00000491761 C1orf115Q9H7X2 142 aa13.33□□□□□ -0.28
SNED1-211ENST00000491761 MED14O60244 1454 aa13.33□□□□□ -0.28
SNED1-211ENST00000491761 SHPRHQ149N8 1683 aa13.33□□□□□ -0.28
SNED1-211ENST00000491761 PHACTR3Q96KR7 559 aa13.32□□□□□ -0.28
SNED1-211ENST00000491761 PTPRMP28827 1452 aa13.32□□□□□ -0.28
SNED1-211ENST00000491761 ARHGEF28Q8N1W1 1705 aaKnown RBP13.32□□□□□ -0.28
SNED1-211ENST00000491761 PPIP5K1Q6PFW1 1433 aa13.32□□□□□ -0.28
SNED1-211ENST00000491761 KCNJ4P48050 445 aa13.32□□□□□ -0.28
SNED1-211ENST00000491761 NGDNQ8NEJ9 315 aaKnown RBP13.32□□□□□ -0.28
SNED1-211ENST00000491761 ARHGAP45Q92619 1136 aa13.32□□□□□ -0.28
SNED1-211ENST00000491761 OS9Q13438 667 aaPredicted RBP13.32□□□□□ -0.28
SNED1-211ENST00000491761 ZRSR1Q15695 479 aaKnown RBP13.32□□□□□ -0.28
SNED1-211ENST00000491761 RTF1Q92541 710 aaKnown RBP13.31□□□□□ -0.28
SNED1-211ENST00000491761 NUCB1Q02818 461 aa13.31□□□□□ -0.28
SNED1-211ENST00000491761 MBIPQ9NS73 344 aa13.31□□□□□ -0.28
SNED1-211ENST00000491761 VAMP4O75379 141 aa13.3□□□□□ -0.28
SNED1-211ENST00000491761 MRPL50Q8N5N7 158 aaKnown RBP13.3□□□□□ -0.28
SNED1-211ENST00000491761 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
SNED1-211ENST00000491761 EDC4Q6P2E9 1401 aaKnown RBP13.3□□□□□ -0.28
SNED1-211ENST00000491761 PNPLA6Q8IY17 1366 aa13.3□□□□□ -0.28
SNED1-211ENST00000491761 ALKQ9UM73 1620 aa13.29□□□□□ -0.28
SNED1-211ENST00000491761 FGD1P98174 961 aa13.29□□□□□ -0.28
SNED1-211ENST00000491761 SULT6B1Q6IMI4 303 aa13.29□□□□□ -0.28
SNED1-211ENST00000491761 IL13P35225 146 aa13.29□□□□□ -0.28
SNED1-211ENST00000491761 ZNF330Q9Y3S2 320 aaPredicted RBP13.29□□□□□ -0.28
SNED1-211ENST00000491761 PKNOX2Q96KN3 472 aa13.29□□□□□ -0.28
SNED1-211ENST00000491761 GBP4Q96PP9 640 aa13.29□□□□□ -0.28
SNED1-211ENST00000491761 ATP7BP35670 1465 aa13.29□□□□□ -0.28
SNED1-211ENST00000491761 TSPYL6Q8N831 410 aa13.28□□□□□ -0.28
SNED1-211ENST00000491761 CDK11BP21127 795 aaKnown RBP13.28□□□□□ -0.28
SNED1-211ENST00000491761 DRC7Q8IY82 874 aa13.28□□□□□ -0.28
SNED1-211ENST00000491761 SIGLEC1Q9BZZ2 1709 aa13.27□□□□□ -0.28
SNED1-211ENST00000491761 GOLGA6L4A6NEF3 574 aa13.27□□□□□ -0.28
SNED1-211ENST00000491761 DCTN1Q14203 1278 aa13.27□□□□□ -0.28
SNED1-211ENST00000491761 LTV1Q96GA3 475 aaPredicted RBP13.27□□□□□ -0.28
SNED1-211ENST00000491761 ARHGEF40Q8TER5 1519 aa13.27□□□□□ -0.29
SNED1-211ENST00000491761 DDX11L8A8MPP1 907 aa13.27□□□□□ -0.29
SNED1-211ENST00000491761 BMP2KLQ5H9B9 411 aa13.27□□□□□ -0.29
SNED1-211ENST00000491761 ZBTB7BO15156 539 aaPredicted RBP13.26□□□□□ -0.29
SNED1-211ENST00000491761 ADGRB2O60241 1585 aa13.26□□□□□ -0.29
SNED1-211ENST00000491761 FAM83GA6ND36 823 aa13.26□□□□□ -0.29
SNED1-211ENST00000491761 CDC45O75419 566 aa13.26□□□□□ -0.29
SNED1-211ENST00000491761 PREX1Q8TCU6 1659 aa13.26□□□□□ -0.29
SNED1-211ENST00000491761 COL3A1P02461 1466 aaPredicted RBP13.25□□□□□ -0.29
SNED1-211ENST00000491761 HMMRO75330 724 aa13.25□□□□□ -0.29
SNED1-211ENST00000491761 AMPHP49418 695 aa13.25□□□□□ -0.29
SNED1-211ENST00000491761 BRPF1P55201 1214 aaPredicted RBP13.25□□□□□ -0.29
SNED1-211ENST00000491761 C8orf58Q8NAV2 365 aa13.25□□□□□ -0.29
SNED1-211ENST00000491761 TMEM131LA2VDJ0 1609 aa13.25□□□□□ -0.29
SNED1-211ENST00000491761 FAM135BQ49AJ0 1406 aa13.25□□□□□ -0.29
SNED1-211ENST00000491761 MCM4P33991 863 aa13.25□□□□□ -0.29
SNED1-211ENST00000491761 NCKAP5LQ9HCH0 1330 aa13.25□□□□□ -0.29
SNED1-211ENST00000491761 TULP1O00294 542 aaPredicted RBP13.25□□□□□ -0.29
SNED1-211ENST00000491761 A2ML1A8K2U0 1454 aa13.25□□□□□ -0.29
SNED1-211ENST00000491761 CD163L1Q9NR16 1453 aa13.24□□□□□ -0.29
SNED1-211ENST00000491761 SLC4A10Q6U841 1118 aa13.24□□□□□ -0.29
SNED1-211ENST00000491761 STK31Q9BXU1 1019 aa13.24□□□□□ -0.29
SNED1-211ENST00000491761 TNRQ92752 1358 aa13.24□□□□□ -0.29
SNED1-211ENST00000491761 SIRT1Q96EB6 747 aa13.24□□□□□ -0.29
SNED1-211ENST00000491761 AATKQ6ZMQ8 1374 aa13.23□□□□□ -0.29
SNED1-211ENST00000491761 PTMSP20962 102 aa13.23□□□□□ -0.29
SNED1-211ENST00000491761 METP08581 1390 aa13.23□□□□□ -0.29
SNED1-211ENST00000491761 TTC21BQ7Z4L5 1316 aa13.22□□□□□ -0.29
SNED1-211ENST00000491761 CHAF1AQ13111 956 aaPredicted RBP13.22□□□□□ -0.29
SNED1-211ENST00000491761 DDX49Q9Y6V7 483 aaKnown RBP13.22□□□□□ -0.29
SNED1-211ENST00000491761 MEX3CQ5U5Q3 659 aaKnown RBP13.22□□□□□ -0.29
SNED1-211ENST00000491761 MCM10Q7L590 875 aa13.22□□□□□ -0.29
SNED1-211ENST00000491761 TSPYL4Q9UJ04 414 aa13.22□□□□□ -0.29
SNED1-211ENST00000491761 RICTORQ6R327 1708 aa13.22□□□□□ -0.29
SNED1-211ENST00000491761 ACEP12821 1306 aa13.21□□□□□ -0.29
SNED1-211ENST00000491761 TRAK2O60296 914 aa13.21□□□□□ -0.29
SNED1-211ENST00000491761 PIP4K2BP78356 416 aa13.21□□□□□ -0.29
SNED1-211ENST00000491761 EIF4A2Q14240 407 aaKnown RBP13.21□□□□□ -0.29
SNED1-211ENST00000491761 DLC1Q96QB1 1528 aa13.21□□□□□ -0.29
SNED1-211ENST00000491761 RPAP2Q8IXW5 612 aaPredicted RBP13.21□□□□□ -0.29
SNED1-211ENST00000491761 LRRC7Q96NW7 1537 aa13.21□□□□□ -0.29
SNED1-211ENST00000491761 AEBP1Q8IUX7 1158 aa13.21□□□□□ -0.3
SNED1-211ENST00000491761 FAM13BQ9NYF5 915 aa13.21□□□□□ -0.3
SNED1-211ENST00000491761 NLRP1Q9C000 1473 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms