RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 DYNC1I1O14576 645 aa11.92□□□□□ -0.5
ERCC3-208ENST00000491292 CABP1Q9NZU7 370 aa11.92□□□□□ -0.5
ERCC3-208ENST00000491292 HCLS1P14317 486 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-208ENST00000491292 SYCP2Q9BX26 1530 aa11.91□□□□□ -0.5
ERCC3-208ENST00000491292 EIF4G3O43432 1585 aaKnown RBP11.91□□□□□ -0.5
ERCC3-208ENST00000491292 KRT24Q2M2I5 525 aa11.91□□□□□ -0.5
ERCC3-208ENST00000491292 GPT2Q8TD30 523 aa11.91□□□□□ -0.5
ERCC3-208ENST00000491292 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
ERCC3-208ENST00000491292 IFT57Q9NWB7 429 aa11.91□□□□□ -0.5
ERCC3-208ENST00000491292 ZBTB7BO15156 539 aaPredicted RBP11.9□□□□□ -0.5
ERCC3-208ENST00000491292 PLEKHM2Q8IWE5 1019 aa11.9□□□□□ -0.5
ERCC3-208ENST00000491292 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
ERCC3-208ENST00000491292 ZNF428Q96B54 188 aa11.9□□□□□ -0.5
ERCC3-208ENST00000491292 TMX3Q96JJ7 454 aa11.9□□□□□ -0.5
ERCC3-208ENST00000491292 NAP1L2Q9ULW6 460 aaPredicted RBP11.9□□□□□ -0.5
ERCC3-208ENST00000491292 KIF3AQ9Y496 699 aa11.9□□□□□ -0.5
ERCC3-208ENST00000491292 ADCY5O95622 1261 aa11.9□□□□□ -0.5
ERCC3-208ENST00000491292 TTC22Q5TAA0 569 aa11.9□□□□□ -0.5
ERCC3-208ENST00000491292 PRAM1Q96QH2 718 aa11.9□□□□□ -0.5
ERCC3-208ENST00000491292 TARBP1Q13395 1621 aaKnown RBP11.9□□□□□ -0.5
ERCC3-208ENST00000491292 F6X3S4 739 aa11.89□□□□□ -0.51
ERCC3-208ENST00000491292 GSPT1P15170 499 aaKnown RBP11.89□□□□□ -0.51
ERCC3-208ENST00000491292 PHACTR3Q96KR7 559 aa11.89□□□□□ -0.51
ERCC3-208ENST00000491292 RRS1Q15050 365 aaKnown RBP11.89□□□□□ -0.51
ERCC3-208ENST00000491292 C8orf58Q8NAV2 365 aa11.89□□□□□ -0.51
ERCC3-208ENST00000491292 ZNF445P59923 1031 aa11.89□□□□□ -0.51
ERCC3-208ENST00000491292 PDCL2Q8N4E4 241 aa11.89□□□□□ -0.51
ERCC3-208ENST00000491292 USP26Q9BXU7 913 aa11.89□□□□□ -0.51
ERCC3-208ENST00000491292 IL1RAPL2Q9NP60 686 aa11.89□□□□□ -0.51
ERCC3-208ENST00000491292 CEP170Q5SW79 1584 aa11.89□□□□□ -0.51
ERCC3-208ENST00000491292 NUP160Q12769 1436 aa11.89□□□□□ -0.51
ERCC3-208ENST00000491292 SLC4A2P04920 1241 aa11.89□□□□□ -0.51
ERCC3-208ENST00000491292 KIF2CQ99661 725 aa11.89□□□□□ -0.51
ERCC3-208ENST00000491292 MBIPQ9NS73 344 aa11.88□□□□□ -0.51
ERCC3-208ENST00000491292 EMILIN1Q9Y6C2 1016 aa11.88□□□□□ -0.51
ERCC3-208ENST00000491292 NLRP1Q9C000 1473 aa11.88□□□□□ -0.51
ERCC3-208ENST00000491292 ADGBQ8N7X0 1667 aa11.88□□□□□ -0.51
ERCC3-208ENST00000491292 NOLC1Q14978 699 aaKnown RBP eCLIP11.88□□□□□ -0.51
ERCC3-208ENST00000491292 RTF1Q92541 710 aaKnown RBP11.88□□□□□ -0.51
ERCC3-208ENST00000491292 VGFO15240 615 aaPredicted RBP11.88□□□□□ -0.51
ERCC3-208ENST00000491292 GADD45BO75293 160 aaPredicted RBP11.88□□□□□ -0.51
ERCC3-208ENST00000491292 ALDH1L2Q3SY69 923 aa11.88□□□□□ -0.51
ERCC3-208ENST00000491292 SMC3Q9UQE7 1217 aa11.88□□□□□ -0.51
ERCC3-208ENST00000491292 ADAMTS12P58397 1594 aa11.87□□□□□ -0.51
ERCC3-208ENST00000491292 NOS1P29475 1434 aa11.87□□□□□ -0.51
ERCC3-208ENST00000491292 HMGN5P82970 282 aaKnown RBP11.87□□□□□ -0.51
ERCC3-208ENST00000491292 VAMP4O75379 141 aa11.87□□□□□ -0.51
ERCC3-208ENST00000491292 CAMK4Q16566 473 aa11.87□□□□□ -0.51
ERCC3-208ENST00000491292 GIMAP6Q6P9H5 292 aa11.87□□□□□ -0.51
ERCC3-208ENST00000491292 GOLGA6L6A8MZA4 724 aa11.87□□□□□ -0.51
ERCC3-208ENST00000491292 C14orf37Q86TY3 774 aa11.87□□□□□ -0.51
ERCC3-208ENST00000491292 MRPL50Q8N5N7 158 aaKnown RBP11.87□□□□□ -0.51
ERCC3-208ENST00000491292 FOSBP53539 338 aa11.86□□□□□ -0.51
ERCC3-208ENST00000491292 FKBP5Q13451 457 aaPredicted RBP11.86□□□□□ -0.51
ERCC3-208ENST00000491292 MCM10Q7L590 875 aa11.86□□□□□ -0.51
ERCC3-208ENST00000491292 FERMT3Q86UX7 667 aa11.86□□□□□ -0.51
ERCC3-208ENST00000491292 MEIS3Q99687 375 aa11.86□□□□□ -0.51
ERCC3-208ENST00000491292 STK31Q9BXU1 1019 aa11.86□□□□□ -0.51
ERCC3-208ENST00000491292 TRPM1Q7Z4N2 1603 aa11.86□□□□□ -0.51
ERCC3-208ENST00000491292 NPC1L1Q9UHC9 1359 aa11.86□□□□□ -0.51
ERCC3-208ENST00000491292 USP48Q86UV5 1035 aa11.86□□□□□ -0.51
ERCC3-208ENST00000491292 PRDM15P57071 1507 aaPredicted RBP11.86□□□□□ -0.51
ERCC3-208ENST00000491292 FYB1O15117 783 aa11.86□□□□□ -0.51
ERCC3-208ENST00000491292 NFE2L2Q16236 605 aa11.86□□□□□ -0.51
ERCC3-208ENST00000491292 FGD1P98174 961 aa11.85□□□□□ -0.51
ERCC3-208ENST00000491292 FCHSD2O94868 740 aa11.85□□□□□ -0.51
ERCC3-208ENST00000491292 LMOD3Q0VAK6 560 aa11.85□□□□□ -0.51
ERCC3-208ENST00000491292 MLECQ14165 292 aa11.85□□□□□ -0.51
ERCC3-208ENST00000491292 ABCC2Q92887 1545 aa11.85□□□□□ -0.51
ERCC3-208ENST00000491292 SHANK2Q9UPX8 1470 aa11.85□□□□□ -0.51
ERCC3-208ENST00000491292 SIRT2Q8IXJ6 389 aa11.85□□□□□ -0.51
ERCC3-208ENST00000491292 DIAPH3Q9NSV4 1193 aa11.85□□□□□ -0.51
ERCC3-208ENST00000491292 CGNQ9P2M7 1197 aaKnown RBP11.85□□□□□ -0.51
ERCC3-208ENST00000491292 CNPY2Q9Y2B0 182 aa11.85□□□□□ -0.51
ERCC3-208ENST00000491292 CCDC94Q9BW85 323 aaPredicted RBP11.84□□□□□ -0.51
ERCC3-208ENST00000491292 NUTM1Q86Y26 1132 aa11.84□□□□□ -0.51
ERCC3-208ENST00000491292 C16orf45Q96MC5 204 aaPredicted RBP11.84□□□□□ -0.51
ERCC3-208ENST00000491292 TRIM5Q9C035 493 aa11.84□□□□□ -0.51
ERCC3-208ENST00000491292 ZNF500O60304 480 aaPredicted RBP11.84□□□□□ -0.51
ERCC3-208ENST00000491292 AK9Q5TCS8 1911 aa11.84□□□□□ -0.51
ERCC3-208ENST00000491292 ABCC11Q96J66 1382 aa11.84□□□□□ -0.51
ERCC3-208ENST00000491292 HS1BP3Q53T59 392 aa11.83□□□□□ -0.51
ERCC3-208ENST00000491292 TRERF1Q96PN7 1200 aa11.83□□□□□ -0.51
ERCC3-208ENST00000491292 CDK19Q9BWU1 502 aa11.83□□□□□ -0.51
ERCC3-208ENST00000491292 SULT6B1Q6IMI4 303 aa11.83□□□□□ -0.52
ERCC3-208ENST00000491292 EIF2AK4Q9P2K8 1649 aaKnown RBP11.83□□□□□ -0.52
ERCC3-208ENST00000491292 PBRM1Q86U86 1689 aa11.83□□□□□ -0.52
ERCC3-208ENST00000491292 LTV1Q96GA3 475 aaPredicted RBP11.83□□□□□ -0.52
ERCC3-208ENST00000491292 WDR33Q9C0J8 1336 aaKnown RBP11.83□□□□□ -0.52
ERCC3-208ENST00000491292 ERICH4A6NGS2 130 aa11.83□□□□□ -0.52
ERCC3-208ENST00000491292 MCM5P33992 734 aa11.83□□□□□ -0.52
ERCC3-208ENST00000491292 COG3Q96JB2 828 aa11.83□□□□□ -0.52
ERCC3-208ENST00000491292 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
ERCC3-208ENST00000491292 U2AF2P26368 475 aaKnown RBP eCLIP11.82□□□□□ -0.52
ERCC3-208ENST00000491292 CKAP2LQ8IYA6 745 aa11.82□□□□□ -0.52
ERCC3-208ENST00000491292 PPIP5K1Q6PFW1 1433 aa11.82□□□□□ -0.52
ERCC3-208ENST00000491292 TRAPPC8Q9Y2L5 1435 aa11.82□□□□□ -0.52
ERCC3-208ENST00000491292 CEBPZQ03701 1054 aaKnown RBP11.82□□□□□ -0.52
ERCC3-208ENST00000491292 TPD52L1Q16890 204 aaPredicted RBP11.82□□□□□ -0.52
ERCC3-208ENST00000491292 EIF2S2P20042 333 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms