RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 FAM83GA6ND36 823 aa15.45■□□□□ 0.06
SHOX2-205ENST00000490689 F6X3S4 739 aa15.45■□□□□ 0.06
SHOX2-205ENST00000490689 CEBPZQ03701 1054 aaKnown RBP15.45■□□□□ 0.06
SHOX2-205ENST00000490689 NFE2L2Q16236 605 aa15.45■□□□□ 0.06
SHOX2-205ENST00000490689 KIF14Q15058 1648 aa15.45■□□□□ 0.06
SHOX2-205ENST00000490689 CDK19Q9BWU1 502 aa15.44■□□□□ 0.06
SHOX2-205ENST00000490689 ZNF521Q96K83 1311 aa15.44■□□□□ 0.06
SHOX2-205ENST00000490689 ZNF608Q9ULD9 1512 aaPredicted RBP15.44■□□□□ 0.06
SHOX2-205ENST00000490689 HCLS1P14317 486 aaPredicted RBP15.44■□□□□ 0.06
SHOX2-205ENST00000490689 ALDH1L2Q3SY69 923 aa15.44■□□□□ 0.06
SHOX2-205ENST00000490689 SDSP20132 328 aa15.43■□□□□ 0.06
SHOX2-205ENST00000490689 GNL2Q13823 731 aaKnown RBP15.43■□□□□ 0.06
SHOX2-205ENST00000490689 CAMK4Q16566 473 aa15.43■□□□□ 0.06
SHOX2-205ENST00000490689 NGDNQ8NEJ9 315 aaKnown RBP15.43■□□□□ 0.06
SHOX2-205ENST00000490689 PIK3C2GO75747 1445 aa15.43■□□□□ 0.06
SHOX2-205ENST00000490689 TSPYL6Q8N831 410 aa15.43■□□□□ 0.06
SHOX2-205ENST00000490689 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.43■□□□□ 0.06
SHOX2-205ENST00000490689 BCORL1Q5H9F3 1711 aa15.43■□□□□ 0.06
SHOX2-205ENST00000490689 UBTFL1P0CB47 393 aaPredicted RBP15.43■□□□□ 0.06
SHOX2-205ENST00000490689 MCM10Q7L590 875 aa15.43■□□□□ 0.06
SHOX2-205ENST00000490689 GNAI2P04899 355 aa15.43■□□□□ 0.06
SHOX2-205ENST00000490689 PPP4R3BQ5MIZ7 849 aa15.43■□□□□ 0.06
SHOX2-205ENST00000490689 LRSAM1Q6UWE0 723 aa15.43■□□□□ 0.06
SHOX2-205ENST00000490689 TSC1Q92574 1164 aa15.43■□□□□ 0.06
SHOX2-205ENST00000490689 LRRCC1Q9C099 1032 aa15.43■□□□□ 0.06
SHOX2-205ENST00000490689 ARHGEF12Q9NZN5 1544 aa15.42■□□□□ 0.06
SHOX2-205ENST00000490689 FAM135AQ9P2D6 1515 aa15.42■□□□□ 0.06
SHOX2-205ENST00000490689 ERBB4Q15303 1308 aa15.42■□□□□ 0.06
SHOX2-205ENST00000490689 ADCY5O95622 1261 aa15.42■□□□□ 0.06
SHOX2-205ENST00000490689 A2MP01023 1474 aa15.42■□□□□ 0.06
SHOX2-205ENST00000490689 DNMT1P26358 1616 aaKnown RBP15.42■□□□□ 0.06
SHOX2-205ENST00000490689 RBM25P49756 843 aaKnown RBP15.42■□□□□ 0.06
SHOX2-205ENST00000490689 HOMER1Q86YM7 354 aa15.42■□□□□ 0.06
SHOX2-205ENST00000490689 EMILIN1Q9Y6C2 1016 aa15.42■□□□□ 0.06
SHOX2-205ENST00000490689 DYNC1I1O14576 645 aa15.42■□□□□ 0.06
SHOX2-205ENST00000490689 IFIT2P09913 472 aaKnown RBP15.42■□□□□ 0.06
SHOX2-205ENST00000490689 RPAP2Q8IXW5 612 aaPredicted RBP15.42■□□□□ 0.06
SHOX2-205ENST00000490689 RUFY2Q8WXA3 655 aa15.42■□□□□ 0.06
SHOX2-205ENST00000490689 KDM5CP41229 1560 aa15.41■□□□□ 0.06
SHOX2-205ENST00000490689 TRMT2AQ8IZ69 625 aaKnown RBP15.41■□□□□ 0.06
SHOX2-205ENST00000490689 TMX3Q96JJ7 454 aa15.41■□□□□ 0.06
SHOX2-205ENST00000490689 GCC2Q8IWJ2 1684 aa15.41■□□□□ 0.06
SHOX2-205ENST00000490689 CD2BP2O95400 341 aaKnown RBP15.41■□□□□ 0.06
SHOX2-205ENST00000490689 TTC22Q5TAA0 569 aa15.41■□□□□ 0.06
SHOX2-205ENST00000490689 NUTM1Q86Y26 1132 aa15.41■□□□□ 0.06
SHOX2-205ENST00000490689 C9orf78Q9NZ63 289 aaPredicted RBP15.41■□□□□ 0.06
SHOX2-205ENST00000490689 DTNBO60941 627 aa15.41■□□□□ 0.06
SHOX2-205ENST00000490689 STK3Q13188 491 aa15.41■□□□□ 0.06
SHOX2-205ENST00000490689 FMNL2Q96PY5 1086 aa15.41■□□□□ 0.06
SHOX2-205ENST00000490689 A0A0G2JS52 829 aa15.4■□□□□ 0.06
SHOX2-205ENST00000490689 OTUD7AQ8TE49 926 aaPredicted RBP15.4■□□□□ 0.06
SHOX2-205ENST00000490689 PKP1Q13835 747 aa15.4■□□□□ 0.06
SHOX2-205ENST00000490689 CWC27Q6UX04 472 aaKnown RBP15.4■□□□□ 0.06
SHOX2-205ENST00000490689 POLR3AO14802 1390 aaPredicted RBP15.4■□□□□ 0.06
SHOX2-205ENST00000490689 CCDC192P0DO97 292 aa15.4■□□□□ 0.06
SHOX2-205ENST00000490689 WDR62O43379 1518 aa15.4■□□□□ 0.06
SHOX2-205ENST00000490689 C17orf53Q8N3J3 647 aaPredicted RBP15.39■□□□□ 0.05
SHOX2-205ENST00000490689 MBIPQ9NS73 344 aa15.39■□□□□ 0.05
SHOX2-205ENST00000490689 MAGI2Q86UL8 1455 aa15.39■□□□□ 0.05
SHOX2-205ENST00000490689 GORABQ5T7V8 394 aa15.39■□□□□ 0.05
SHOX2-205ENST00000490689 LETM1O95202 739 aaPredicted RBP15.38■□□□□ 0.05
SHOX2-205ENST00000490689 GNAI3P08754 354 aa15.38■□□□□ 0.05
SHOX2-205ENST00000490689 CCDC112Q8NEF3 446 aa15.38■□□□□ 0.05
SHOX2-205ENST00000490689 NUTM2GQ5VZR2 741 aa15.38■□□□□ 0.05
SHOX2-205ENST00000490689 GIMAP6Q6P9H5 292 aa15.38■□□□□ 0.05
SHOX2-205ENST00000490689 FILIP1Q7Z7B0 1213 aa15.38■□□□□ 0.05
SHOX2-205ENST00000490689 C16orf45Q96MC5 204 aaPredicted RBP15.38■□□□□ 0.05
SHOX2-205ENST00000490689 CCDC83Q8IWF9 413 aa15.38■□□□□ 0.05
SHOX2-205ENST00000490689 ATAD2Q6PL18 1390 aa15.37■□□□□ 0.05
SHOX2-205ENST00000490689 C8orf58Q8NAV2 365 aa15.37■□□□□ 0.05
SHOX2-205ENST00000490689 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
SHOX2-205ENST00000490689 ERICH4A6NGS2 130 aa15.37■□□□□ 0.05
SHOX2-205ENST00000490689 LARP1BQ659C4 914 aaKnown RBP15.37■□□□□ 0.05
SHOX2-205ENST00000490689 TPM4P67936 248 aa15.37■□□□□ 0.05
SHOX2-205ENST00000490689 NOLC1Q14978 699 aaKnown RBP eCLIP15.37■□□□□ 0.05
SHOX2-205ENST00000490689 CKAP2LQ8IYA6 745 aa15.37■□□□□ 0.05
SHOX2-205ENST00000490689 MEIS3Q99687 375 aa15.37■□□□□ 0.05
SHOX2-205ENST00000490689 TNMDQ9H2S6 317 aa15.37■□□□□ 0.05
SHOX2-205ENST00000490689 NOL7Q9UMY1 257 aaKnown RBP15.36■□□□□ 0.05
SHOX2-205ENST00000490689 KRT24Q2M2I5 525 aa15.36■□□□□ 0.05
SHOX2-205ENST00000490689 CREBRFQ8IUR6 639 aa15.36■□□□□ 0.05
SHOX2-205ENST00000490689 CNTROBQ8N137 903 aa15.36■□□□□ 0.05
SHOX2-205ENST00000490689 GRIN2AQ12879 1464 aa15.36■□□□□ 0.05
SHOX2-205ENST00000490689 MX1P20591 662 aa15.36■□□□□ 0.05
SHOX2-205ENST00000490689 PLEKHM2Q8IWE5 1019 aa15.36■□□□□ 0.05
SHOX2-205ENST00000490689 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.36■□□□□ 0.05
SHOX2-205ENST00000490689 MCM5P33992 734 aa15.36■□□□□ 0.05
SHOX2-205ENST00000490689 CCDC183Q5T5S1 534 aa15.36■□□□□ 0.05
SHOX2-205ENST00000490689 JAKMIP1Q96N16 626 aaKnown RBP15.36■□□□□ 0.05
SHOX2-205ENST00000490689 ABCC11Q96J66 1382 aa15.35■□□□□ 0.05
SHOX2-205ENST00000490689 WAPLQ7Z5K2 1190 aa15.35■□□□□ 0.05
SHOX2-205ENST00000490689 CASTP20810 708 aaKnown RBP15.35■□□□□ 0.05
SHOX2-205ENST00000490689 USP48Q86UV5 1035 aa15.35■□□□□ 0.05
SHOX2-205ENST00000490689 SDF4Q9BRK5 362 aa15.35■□□□□ 0.05
SHOX2-205ENST00000490689 CGNQ9P2M7 1197 aaKnown RBP15.35■□□□□ 0.05
SHOX2-205ENST00000490689 ZNF330Q9Y3S2 320 aaPredicted RBP15.35■□□□□ 0.05
SHOX2-205ENST00000490689 NOS1P29475 1434 aa15.35■□□□□ 0.05
SHOX2-205ENST00000490689 ATP10BO94823 1461 aa15.35■□□□□ 0.05
SHOX2-205ENST00000490689 RAPGEF6Q8TEU7 1601 aa15.34■□□□□ 0.05
SHOX2-205ENST00000490689 NME9Q86XW9 330 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms