RNA–Protein interactions for RNA: ENST00000490610.1

CACUL1-205, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-205ENST00000490610 SUPT16HQ9Y5B9 1047 aaKnown RBP12.28□□□□□ -0.44
CACUL1-205ENST00000490610 CPSF1Q10570 1443 aaKnown RBP12.28□□□□□ -0.44
CACUL1-205ENST00000490610 NGEFQ8N5V2 710 aa12.27□□□□□ -0.45
CACUL1-205ENST00000490610 OTUD5Q96G74 571 aa12.27□□□□□ -0.45
CACUL1-205ENST00000490610 AMOTL2Q9Y2J4 779 aa12.27□□□□□ -0.45
CACUL1-205ENST00000490610 POTEFA5A3E0 1075 aa12.26□□□□□ -0.45
CACUL1-205ENST00000490610 SEC24BO95487 1268 aa12.26□□□□□ -0.45
CACUL1-205ENST00000490610 EFCAB3Q8N7B9 438 aa12.26□□□□□ -0.45
CACUL1-205ENST00000490610 NUDT16Q96DE0 195 aaKnown RBP12.26□□□□□ -0.45
CACUL1-205ENST00000490610 ADAMTS8Q9UP79 889 aa12.26□□□□□ -0.45
CACUL1-205ENST00000490610 MKRN3Q13064 507 aaKnown RBP12.25□□□□□ -0.45
CACUL1-205ENST00000490610 NRKQ7Z2Y5 1582 aa12.25□□□□□ -0.45
CACUL1-205ENST00000490610 ERICH6BQ5W0A0 696 aa12.24□□□□□ -0.45
CACUL1-205ENST00000490610 FMN2Q9NZ56 1722 aa12.24□□□□□ -0.45
CACUL1-205ENST00000490610 NPHP4O75161 1426 aaPredicted RBP12.23□□□□□ -0.45
CACUL1-205ENST00000490610 ANKARQ7Z5J8 1434 aa12.23□□□□□ -0.45
CACUL1-205ENST00000490610 FYB1O15117 783 aa12.23□□□□□ -0.45
CACUL1-205ENST00000490610 POTEJP0CG39 1038 aa12.23□□□□□ -0.45
CACUL1-205ENST00000490610 TNNT2P45379 298 aaPredicted RBP12.23□□□□□ -0.45
CACUL1-205ENST00000490610 IRX5P78411 483 aaPredicted RBP12.23□□□□□ -0.45
CACUL1-205ENST00000490610 COLQQ9Y215 455 aaPredicted RBP12.23□□□□□ -0.45
CACUL1-205ENST00000490610 MTHFSP49914 203 aa12.22□□□□□ -0.45
CACUL1-205ENST00000490610 GGNBP2Q9H3C7 697 aa12.22□□□□□ -0.45
CACUL1-205ENST00000490610 MAP2P11137 1827 aaKnown RBP12.21□□□□□ -0.45
CACUL1-205ENST00000490610 PRR36Q9H6K5 1346 aa12.21□□□□□ -0.45
CACUL1-205ENST00000490610 NALCNQ8IZF0 1738 aa12.21□□□□□ -0.45
CACUL1-205ENST00000490610 NWD1Q149M9 1564 aa12.21□□□□□ -0.46
CACUL1-205ENST00000490610 COL3A1P02461 1466 aaPredicted RBP12.21□□□□□ -0.46
CACUL1-205ENST00000490610 PLEKHG3A1L390 1219 aa12.2□□□□□ -0.46
CACUL1-205ENST00000490610 RGPD8O14715 1765 aaPredicted RBP12.2□□□□□ -0.46
CACUL1-205ENST00000490610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.19□□□□□ -0.46
CACUL1-205ENST00000490610 NKTRP30414 1462 aaKnown RBP12.19□□□□□ -0.46
CACUL1-205ENST00000490610 USP6P35125 1406 aa12.19□□□□□ -0.46
CACUL1-205ENST00000490610 AATKQ6ZMQ8 1374 aa12.18□□□□□ -0.46
CACUL1-205ENST00000490610 KCNA6P17658 529 aa12.18□□□□□ -0.46
CACUL1-205ENST00000490610 MAMSTRQ6ZN01 415 aa12.18□□□□□ -0.46
CACUL1-205ENST00000490610 ILDR1Q86SU0 546 aaPredicted RBP12.18□□□□□ -0.46
CACUL1-205ENST00000490610 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.18□□□□□ -0.46
CACUL1-205ENST00000490610 IQSEC2Q5JU85 1478 aa12.18□□□□□ -0.46
CACUL1-205ENST00000490610 CDK12Q9NYV4 1490 aaPredicted RBP12.18□□□□□ -0.46
CACUL1-205ENST00000490610 SOX12O15370 315 aa12.17□□□□□ -0.46
CACUL1-205ENST00000490610 PLCG2P16885 1265 aa12.17□□□□□ -0.46
CACUL1-205ENST00000490610 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
CACUL1-205ENST00000490610 RUNDC1Q96C34 613 aa12.17□□□□□ -0.46
CACUL1-205ENST00000490610 COG3Q96JB2 828 aa12.17□□□□□ -0.46
CACUL1-205ENST00000490610 OCEL1Q9H607 264 aa12.17□□□□□ -0.46
CACUL1-205ENST00000490610 SALL2Q9Y467 1007 aaPredicted RBP12.17□□□□□ -0.46
CACUL1-205ENST00000490610 ADGRL3Q9HAR2 1447 aa12.17□□□□□ -0.46
CACUL1-205ENST00000490610 PNPLA6Q8IY17 1366 aa12.17□□□□□ -0.46
CACUL1-205ENST00000490610 ACEP12821 1306 aa12.16□□□□□ -0.46
CACUL1-205ENST00000490610 RNF123Q5XPI4 1314 aa12.16□□□□□ -0.46
CACUL1-205ENST00000490610 TTC21AQ8NDW8 1320 aa12.16□□□□□ -0.46
CACUL1-205ENST00000490610 ZNF521Q96K83 1311 aa12.16□□□□□ -0.46
CACUL1-205ENST00000490610 CCDC146Q8IYE0 955 aa12.16□□□□□ -0.46
CACUL1-205ENST00000490610 PNNQ9H307 717 aaKnown RBP12.16□□□□□ -0.46
CACUL1-205ENST00000490610 LRRC7Q96NW7 1537 aa12.16□□□□□ -0.46
CACUL1-205ENST00000490610 USP54Q70EL1 1684 aa12.16□□□□□ -0.46
CACUL1-205ENST00000490610 OVOS2A0A0J9YW53 1432 aa12.15□□□□□ -0.46
CACUL1-205ENST00000490610 OVOS2Q6IE36 1432 aa12.15□□□□□ -0.46
CACUL1-205ENST00000490610 APAF1O14727 1248 aa12.15□□□□□ -0.46
CACUL1-205ENST00000490610 MFRPQ9BY79 579 aa12.15□□□□□ -0.46
CACUL1-205ENST00000490610 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
CACUL1-205ENST00000490610 TTC21BQ7Z4L5 1316 aa12.14□□□□□ -0.47
CACUL1-205ENST00000490610 SENP3-EIF4A1A0A087X0R7 540 aa12.14□□□□□ -0.47
CACUL1-205ENST00000490610 DIAPH1O60610 1272 aaKnown RBP12.14□□□□□ -0.47
CACUL1-205ENST00000490610 U2AF1L5P0DN76 240 aaPredicted RBP12.14□□□□□ -0.47
CACUL1-205ENST00000490610 U2AF1Q01081 240 aaKnown RBP eCLIP12.14□□□□□ -0.47
CACUL1-205ENST00000490610 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
CACUL1-205ENST00000490610 NME9Q86XW9 330 aa12.14□□□□□ -0.47
CACUL1-205ENST00000490610 SCUBE2Q9NQ36 999 aa12.14□□□□□ -0.47
CACUL1-205ENST00000490610 RCAN3Q9UKA8 241 aa12.14□□□□□ -0.47
CACUL1-205ENST00000490610 NCKAP5LQ9HCH0 1330 aa12.13□□□□□ -0.47
CACUL1-205ENST00000490610 SSH2Q76I76 1423 aa12.13□□□□□ -0.47
CACUL1-205ENST00000490610 E9PSI1 815 aa12.12□□□□□ -0.47
CACUL1-205ENST00000490610 CCDC27Q2M243 656 aa12.12□□□□□ -0.47
CACUL1-205ENST00000490610 NGDNQ8NEJ9 315 aaKnown RBP12.12□□□□□ -0.47
CACUL1-205ENST00000490610 FBXO22Q8NEZ5 403 aa12.12□□□□□ -0.47
CACUL1-205ENST00000490610 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
CACUL1-205ENST00000490610 MAPK8IP3Q9UPT6 1336 aa12.11□□□□□ -0.47
CACUL1-205ENST00000490610 PIK3C2AO00443 1686 aa12.11□□□□□ -0.47
CACUL1-205ENST00000490610 NUTM2FA1L443 756 aa12.11□□□□□ -0.47
CACUL1-205ENST00000490610 U2SURPO15042 1029 aaKnown RBP12.11□□□□□ -0.47
CACUL1-205ENST00000490610 MS4A4AQ96JQ5 239 aa12.11□□□□□ -0.47
CACUL1-205ENST00000490610 POLKQ9UBT6 870 aa12.11□□□□□ -0.47
CACUL1-205ENST00000490610 USP31Q70CQ4 1352 aa12.1□□□□□ -0.47
CACUL1-205ENST00000490610 NEFMP07197 916 aa12.1□□□□□ -0.47
CACUL1-205ENST00000490610 SLFN5Q08AF3 891 aa12.1□□□□□ -0.47
CACUL1-205ENST00000490610 TCP11L2Q8N4U5 519 aa12.1□□□□□ -0.47
CACUL1-205ENST00000490610 PPP4R2Q9NY27 417 aa12.1□□□□□ -0.47
CACUL1-205ENST00000490610 KIF1AQ12756 1690 aa12.1□□□□□ -0.47
CACUL1-205ENST00000490610 RRP1P56182 461 aaKnown RBP12.09□□□□□ -0.47
CACUL1-205ENST00000490610 NLRP6P59044 892 aa12.09□□□□□ -0.47
CACUL1-205ENST00000490610 DUSP27Q5VZP5 1158 aa12.09□□□□□ -0.47
CACUL1-205ENST00000490610 DPY19L2Q6NUT2 758 aa12.09□□□□□ -0.47
CACUL1-205ENST00000490610 PPM1GO15355 546 aaPredicted RBP12.08□□□□□ -0.48
CACUL1-205ENST00000490610 FCHSD2O94868 740 aa12.08□□□□□ -0.48
CACUL1-205ENST00000490610 IRX6P78412 446 aaPredicted RBP12.08□□□□□ -0.48
CACUL1-205ENST00000490610 C14orf37Q86TY3 774 aa12.08□□□□□ -0.48
CACUL1-205ENST00000490610 WDR63Q8IWG1 891 aa12.08□□□□□ -0.48
CACUL1-205ENST00000490610 WWC1Q8IX03 1113 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms