RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ZNF784Q8NCA9 323 aaPredicted RBP11.2□□□□□ -0.62
PDLIM1-203ENST00000490391 NRAPQ86VF7 1730 aa11.2□□□□□ -0.62
PDLIM1-203ENST00000490391 HFM1A2PYH4 1435 aa11.19□□□□□ -0.62
PDLIM1-203ENST00000490391 NINLQ9Y2I6 1382 aa11.19□□□□□ -0.62
PDLIM1-203ENST00000490391 ABCA3Q99758 1704 aa11.19□□□□□ -0.62
PDLIM1-203ENST00000490391 CAMKK2Q96RR4 588 aa11.19□□□□□ -0.62
PDLIM1-203ENST00000490391 RREB1Q92766 1687 aa11.18□□□□□ -0.62
PDLIM1-203ENST00000490391 FAM182BQ5T319 152 aa11.18□□□□□ -0.62
PDLIM1-203ENST00000490391 THSD7AQ9UPZ6 1657 aa11.17□□□□□ -0.62
PDLIM1-203ENST00000490391 LRPPRCP42704 1394 aaKnown RBP11.17□□□□□ -0.62
PDLIM1-203ENST00000490391 ADGRB2O60241 1585 aa11.17□□□□□ -0.62
PDLIM1-203ENST00000490391 FAM98CQ17RN3 349 aaKnown RBP11.17□□□□□ -0.62
PDLIM1-203ENST00000490391 NUP188Q5SRE5 1749 aa11.17□□□□□ -0.62
PDLIM1-203ENST00000490391 GOLGB1Q14789 3259 aaKnown RBP11.17□□□□□ -0.62
PDLIM1-203ENST00000490391 C1QTNF8P60827 252 aa11.16□□□□□ -0.62
PDLIM1-203ENST00000490391 ZNF326Q5BKZ1 582 aaKnown RBP11.16□□□□□ -0.62
PDLIM1-203ENST00000490391 ANKRD13DQ6ZTN6 518 aa11.16□□□□□ -0.62
PDLIM1-203ENST00000490391 CCDC9Q9Y3X0 531 aaKnown RBP11.16□□□□□ -0.62
PDLIM1-203ENST00000490391 PARD3Q8TEW0 1356 aa11.16□□□□□ -0.62
PDLIM1-203ENST00000490391 CCDC144AA2RUR9 1427 aa11.15□□□□□ -0.62
PDLIM1-203ENST00000490391 TNS3Q68CZ2 1445 aa11.15□□□□□ -0.62
PDLIM1-203ENST00000490391 A0A0G2JS52 829 aa11.14□□□□□ -0.63
PDLIM1-203ENST00000490391 MYT1Q01538 1121 aa11.14□□□□□ -0.63
PDLIM1-203ENST00000490391 TMEM92Q6UXU6 159 aa11.14□□□□□ -0.63
PDLIM1-203ENST00000490391 CABLES1Q8TDN4 633 aa11.14□□□□□ -0.63
PDLIM1-203ENST00000490391 NAIPQ13075 1403 aa11.14□□□□□ -0.63
PDLIM1-203ENST00000490391 KIF1AQ12756 1690 aa11.14□□□□□ -0.63
PDLIM1-203ENST00000490391 CLTCL1P53675 1640 aa11.13□□□□□ -0.63
PDLIM1-203ENST00000490391 FAM83GA6ND36 823 aa11.13□□□□□ -0.63
PDLIM1-203ENST00000490391 SPON1Q9HCB6 807 aa11.12□□□□□ -0.63
PDLIM1-203ENST00000490391 NUP155O75694 1391 aa11.12□□□□□ -0.63
PDLIM1-203ENST00000490391 FMN2Q9NZ56 1722 aa11.12□□□□□ -0.63
PDLIM1-203ENST00000490391 NUTM2FA1L443 756 aa11.11□□□□□ -0.63
PDLIM1-203ENST00000490391 KCNQ2O43526 872 aa11.11□□□□□ -0.63
PDLIM1-203ENST00000490391 KRT28Q7Z3Y7 464 aa11.11□□□□□ -0.63
PDLIM1-203ENST00000490391 PPP1R1BQ9UD71 204 aaPredicted RBP11.11□□□□□ -0.63
PDLIM1-203ENST00000490391 CHD4Q14839 1912 aa11.1□□□□□ -0.63
PDLIM1-203ENST00000490391 TRIM37O94972 964 aa11.1□□□□□ -0.63
PDLIM1-203ENST00000490391 SPATA31A5Q5VU36 1347 aa11.09□□□□□ -0.63
PDLIM1-203ENST00000490391 SPATA31A7Q8IWB4 1347 aa11.09□□□□□ -0.63
PDLIM1-203ENST00000490391 TECPR2O15040 1411 aa11.09□□□□□ -0.63
PDLIM1-203ENST00000490391 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDLIM1-203ENST00000490391 MICALL2Q8IY33 904 aa11.09□□□□□ -0.63
PDLIM1-203ENST00000490391 PLA2G2EQ9NZK7 142 aa11.09□□□□□ -0.63
PDLIM1-203ENST00000490391 COL14A1Q05707 1796 aaKnown RBP11.08□□□□□ -0.64
PDLIM1-203ENST00000490391 NRKQ7Z2Y5 1582 aa11.08□□□□□ -0.64
PDLIM1-203ENST00000490391 SBNO1A3KN83 1393 aa11.08□□□□□ -0.64
PDLIM1-203ENST00000490391 KIF1BO60333 1816 aa11.08□□□□□ -0.64
PDLIM1-203ENST00000490391 APBA3O96018 575 aa11.08□□□□□ -0.64
PDLIM1-203ENST00000490391 VASPP50552 380 aaPredicted RBP11.08□□□□□ -0.64
PDLIM1-203ENST00000490391 HAP1P54257 671 aaPredicted RBP11.08□□□□□ -0.64
PDLIM1-203ENST00000490391 BTG4Q9NY30 223 aa11.08□□□□□ -0.64
PDLIM1-203ENST00000490391 CASZ1Q86V15 1759 aa11.08□□□□□ -0.64
PDLIM1-203ENST00000490391 FAM196AQ6ZSG2 479 aa11.07□□□□□ -0.64
PDLIM1-203ENST00000490391 RGPD8O14715 1765 aaPredicted RBP11.07□□□□□ -0.64
PDLIM1-203ENST00000490391 ARHGEF10O15013 1369 aa11.06□□□□□ -0.64
PDLIM1-203ENST00000490391 ROCK1Q13464 1354 aa11.06□□□□□ -0.64
PDLIM1-203ENST00000490391 PLEKHH1Q9ULM0 1364 aa11.06□□□□□ -0.64
PDLIM1-203ENST00000490391 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
PDLIM1-203ENST00000490391 ARSIQ5FYB1 569 aa11.06□□□□□ -0.64
PDLIM1-203ENST00000490391 EFCAB3Q8N7B9 438 aa11.06□□□□□ -0.64
PDLIM1-203ENST00000490391 RRBP1Q9P2E9 1410 aaKnown RBP11.06□□□□□ -0.64
PDLIM1-203ENST00000490391 MYOM1P52179 1685 aa11.05□□□□□ -0.64
PDLIM1-203ENST00000490391 ZNF316A6NFI3 1004 aaPredicted RBP11.05□□□□□ -0.64
PDLIM1-203ENST00000490391 FAM50AQ14320 339 aaKnown RBP11.05□□□□□ -0.64
PDLIM1-203ENST00000490391 NBPF8Q3BBV2 869 aa11.05□□□□□ -0.64
PDLIM1-203ENST00000490391 NBPF14Q5TI25 921 aa11.05□□□□□ -0.64
PDLIM1-203ENST00000490391 WAPLQ7Z5K2 1190 aa11.05□□□□□ -0.64
PDLIM1-203ENST00000490391 PPLO60437 1756 aa11.05□□□□□ -0.64
PDLIM1-203ENST00000490391 NRXN1Q9ULB1 1477 aa11.05□□□□□ -0.64
PDLIM1-203ENST00000490391 KNDC1Q76NI1 1749 aa11.04□□□□□ -0.64
PDLIM1-203ENST00000490391 CRYBG1Q9Y4K1 1723 aa11.04□□□□□ -0.64
PDLIM1-203ENST00000490391 PHF8Q9UPP1 1060 aa11.03□□□□□ -0.64
PDLIM1-203ENST00000490391 TRPM3Q9HCF6 1732 aaPredicted RBP11.03□□□□□ -0.64
PDLIM1-203ENST00000490391 IFT172Q9UG01 1749 aa11.03□□□□□ -0.64
PDLIM1-203ENST00000490391 SPATA31A1Q5TZJ5 1347 aa11.03□□□□□ -0.64
PDLIM1-203ENST00000490391 ALS2Q96Q42 1657 aa11.02□□□□□ -0.64
PDLIM1-203ENST00000490391 PSME1Q06323 249 aa11.02□□□□□ -0.65
PDLIM1-203ENST00000490391 ABCC11Q96J66 1382 aa11.02□□□□□ -0.65
PDLIM1-203ENST00000490391 RGPD3A6NKT7 1758 aaPredicted RBP11.01□□□□□ -0.65
PDLIM1-203ENST00000490391 RGPD4Q7Z3J3 1758 aa11.01□□□□□ -0.65
PDLIM1-203ENST00000490391 LMOD2Q6P5Q4 547 aa11.01□□□□□ -0.65
PDLIM1-203ENST00000490391 PDGFDQ9GZP0 370 aaPredicted RBP11.01□□□□□ -0.65
PDLIM1-203ENST00000490391 ANO8Q9HCE9 1232 aaPredicted RBP11.01□□□□□ -0.65
PDLIM1-203ENST00000490391 HCSTQ9UBK5 93 aa11.01□□□□□ -0.65
PDLIM1-203ENST00000490391 RPGRIP1LQ68CZ1 1315 aa11.01□□□□□ -0.65
PDLIM1-203ENST00000490391 SYT17Q9BSW7 474 aa10.99□□□□□ -0.65
PDLIM1-203ENST00000490391 GIGYF1O75420 1035 aaPredicted RBP10.98□□□□□ -0.65
PDLIM1-203ENST00000490391 KHSRPQ92945 711 aaKnown RBP eCLIP10.98□□□□□ -0.65
PDLIM1-203ENST00000490391 FHDC1Q9C0D6 1143 aaPredicted RBP10.98□□□□□ -0.65
PDLIM1-203ENST00000490391 STK26Q9P289 416 aa10.98□□□□□ -0.65
PDLIM1-203ENST00000490391 CIZ1Q9ULV3 898 aaPredicted RBP10.98□□□□□ -0.65
PDLIM1-203ENST00000490391 ZBTB7AO95365 584 aa10.97□□□□□ -0.65
PDLIM1-203ENST00000490391 PBX2P40425 430 aa10.97□□□□□ -0.65
PDLIM1-203ENST00000490391 SHANK3Q9BYB0 1731 aa10.97□□□□□ -0.65
PDLIM1-203ENST00000490391 PEAK1Q9H792 1746 aa10.96□□□□□ -0.65
PDLIM1-203ENST00000490391 ADGRF5Q8IZF2 1346 aa10.96□□□□□ -0.65
PDLIM1-203ENST00000490391 DLC1Q96QB1 1528 aa10.95□□□□□ -0.66
PDLIM1-203ENST00000490391 YTHDC2Q9H6S0 1430 aaKnown RBP10.95□□□□□ -0.66
PDLIM1-203ENST00000490391 BARGINQ6ZT62 677 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms