RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 A6NJR5 290 aa11.03□□□□□ -0.64
CCDC39-206ENST00000489868 MYT1Q01538 1121 aa11.03□□□□□ -0.64
CCDC39-206ENST00000489868 WASHC4Q2M389 1173 aa11.03□□□□□ -0.64
CCDC39-206ENST00000489868 Q6ZNB5 142 aa11.03□□□□□ -0.64
CCDC39-206ENST00000489868 KLF16Q9BXK1 252 aaPredicted RBP11.03□□□□□ -0.64
CCDC39-206ENST00000489868 ESPNB1AK53 854 aa11.02□□□□□ -0.65
CCDC39-206ENST00000489868 GIGYF1O75420 1035 aaPredicted RBP11.02□□□□□ -0.65
CCDC39-206ENST00000489868 NR5A1Q13285 461 aa11.02□□□□□ -0.65
CCDC39-206ENST00000489868 INTS6LQ5JSJ4 861 aaKnown RBP11.02□□□□□ -0.65
CCDC39-206ENST00000489868 ADAMTS19Q8TE59 1207 aa11.01□□□□□ -0.65
CCDC39-206ENST00000489868 CDV3Q9UKY7 258 aaKnown RBP11.01□□□□□ -0.65
CCDC39-206ENST00000489868 ST8SIA5O15466 376 aa11□□□□□ -0.65
CCDC39-206ENST00000489868 NBPF20Q3BBV1 942 aa11□□□□□ -0.65
CCDC39-206ENST00000489868 RAB15P59190 212 aa10.99□□□□□ -0.65
CCDC39-206ENST00000489868 TIMP2P16035 220 aa10.98□□□□□ -0.65
CCDC39-206ENST00000489868 EIF4G2P78344 907 aaKnown RBP eCLIP10.98□□□□□ -0.65
CCDC39-206ENST00000489868 CCDC116Q8IYX3 515 aa10.98□□□□□ -0.65
CCDC39-206ENST00000489868 ALG2Q9H553 416 aa10.98□□□□□ -0.65
CCDC39-206ENST00000489868 CEP126Q9P2H0 1117 aa10.98□□□□□ -0.65
CCDC39-206ENST00000489868 ZNF330Q9Y3S2 320 aaPredicted RBP10.98□□□□□ -0.65
CCDC39-206ENST00000489868 CRIPAKQ8N1N5 446 aa10.97□□□□□ -0.65
CCDC39-206ENST00000489868 ITPKCQ96DU7 683 aa10.97□□□□□ -0.65
CCDC39-206ENST00000489868 ZFAND3Q9H8U3 227 aa10.97□□□□□ -0.65
CCDC39-206ENST00000489868 AAASQ9NRG9 546 aa10.97□□□□□ -0.65
CCDC39-206ENST00000489868 ERVH48-1M5A8F1 160 aa10.96□□□□□ -0.65
CCDC39-206ENST00000489868 WDR4P57081 412 aaKnown RBP10.96□□□□□ -0.65
CCDC39-206ENST00000489868 PPP1R26Q5T8A7 1209 aaPredicted RBP10.96□□□□□ -0.65
CCDC39-206ENST00000489868 TMPRSS4Q9NRS4 437 aa10.96□□□□□ -0.65
CCDC39-206ENST00000489868 DACH1Q9UI36 760 aa10.96□□□□□ -0.65
CCDC39-206ENST00000489868 TRAK2O60296 914 aa10.95□□□□□ -0.66
CCDC39-206ENST00000489868 SMCPP49901 116 aaPredicted RBP10.95□□□□□ -0.66
CCDC39-206ENST00000489868 MCCD1P59942 119 aaPredicted RBP10.95□□□□□ -0.66
CCDC39-206ENST00000489868 PHTF2Q8N3S3 785 aa10.95□□□□□ -0.66
CCDC39-206ENST00000489868 ZMYND15Q9H091 742 aa10.95□□□□□ -0.66
CCDC39-206ENST00000489868 ZIC2O95409 532 aaPredicted RBP10.94□□□□□ -0.66
CCDC39-206ENST00000489868 TSGA10IPQ3SY00 556 aa10.94□□□□□ -0.66
CCDC39-206ENST00000489868 TRAF7Q6Q0C0 670 aa10.94□□□□□ -0.66
CCDC39-206ENST00000489868 WWC1Q8IX03 1113 aa10.94□□□□□ -0.66
CCDC39-206ENST00000489868 SEMA3FQ13275 785 aa10.93□□□□□ -0.66
CCDC39-206ENST00000489868 CTC1Q2NKJ3 1217 aa10.93□□□□□ -0.66
CCDC39-206ENST00000489868 SEPT12Q8IYM1 358 aa10.93□□□□□ -0.66
CCDC39-206ENST00000489868 CCDC85AQ96PX6 553 aaPredicted RBP10.93□□□□□ -0.66
CCDC39-206ENST00000489868 PIK3CDO00329 1044 aa10.92□□□□□ -0.66
CCDC39-206ENST00000489868 AXIN1O15169 862 aa10.92□□□□□ -0.66
CCDC39-206ENST00000489868 CAPN5O15484 640 aaPredicted RBP10.92□□□□□ -0.66
CCDC39-206ENST00000489868 SOX11P35716 441 aa10.92□□□□□ -0.66
CCDC39-206ENST00000489868 ZNF784Q8NCA9 323 aaPredicted RBP10.92□□□□□ -0.66
CCDC39-206ENST00000489868 HDGFL1Q5TGJ6 251 aa10.91□□□□□ -0.66
CCDC39-206ENST00000489868 EMILIN1Q9Y6C2 1016 aa10.91□□□□□ -0.66
CCDC39-206ENST00000489868 LILRA1O75019 489 aa10.9□□□□□ -0.66
CCDC39-206ENST00000489868 BMP1P13497 986 aa10.9□□□□□ -0.66
CCDC39-206ENST00000489868 C14orf37Q86TY3 774 aa10.9□□□□□ -0.66
CCDC39-206ENST00000489868 ZNF592Q92610 1267 aa10.9□□□□□ -0.66
CCDC39-206ENST00000489868 GLMNQ92990 594 aa10.9□□□□□ -0.66
CCDC39-206ENST00000489868 UCN2Q96RP3 112 aa10.9□□□□□ -0.66
CCDC39-206ENST00000489868 CDCA7Q9BWT1 371 aaPredicted RBP10.9□□□□□ -0.66
CCDC39-206ENST00000489868 SCTRP47872 440 aa10.89□□□□□ -0.67
CCDC39-206ENST00000489868 DHX9Q08211 1270 aaKnown RBP10.89□□□□□ -0.67
CCDC39-206ENST00000489868 CBLBQ13191 982 aa10.89□□□□□ -0.67
CCDC39-206ENST00000489868 CHIC2Q9UKJ5 165 aa10.89□□□□□ -0.67
CCDC39-206ENST00000489868 ZNF777Q9ULD5 760 aaPredicted RBP10.89□□□□□ -0.67
CCDC39-206ENST00000489868 ADD1P35611 737 aaKnown RBP10.88□□□□□ -0.67
CCDC39-206ENST00000489868 TRIM46Q7Z4K8 759 aa10.88□□□□□ -0.67
CCDC39-206ENST00000489868 CYLDQ9NQC7 956 aa10.88□□□□□ -0.67
CCDC39-206ENST00000489868 PCDHB11Q9Y5F2 797 aa10.88□□□□□ -0.67
CCDC39-206ENST00000489868 SLFNL1Q499Z3 407 aa10.87□□□□□ -0.67
CCDC39-206ENST00000489868 RNF20Q5VTR2 975 aa10.87□□□□□ -0.67
CCDC39-206ENST00000489868 RNF135Q8IUD6 432 aa10.87□□□□□ -0.67
CCDC39-206ENST00000489868 PGPEP1Q9NXJ5 209 aa10.87□□□□□ -0.67
CCDC39-206ENST00000489868 TIMELESSQ9UNS1 1208 aa10.87□□□□□ -0.67
CCDC39-206ENST00000489868 Q6ZVU0 165 aa10.86□□□□□ -0.67
CCDC39-206ENST00000489868 MEIOBQ8N635 442 aa10.86□□□□□ -0.67
CCDC39-206ENST00000489868 KDF1Q8NAX2 398 aaPredicted RBP10.85□□□□□ -0.67
CCDC39-206ENST00000489868 ATP13A2Q9NQ11 1180 aa10.85□□□□□ -0.67
CCDC39-206ENST00000489868 POTECB2RU33 542 aa10.84□□□□□ -0.67
CCDC39-206ENST00000489868 ERVK-9P63128 1117 aa10.84□□□□□ -0.67
CCDC39-206ENST00000489868 PLPP7Q8NBV4 271 aa10.83□□□□□ -0.68
CCDC39-206ENST00000489868 AGBL1Q96MI9 1066 aa10.83□□□□□ -0.68
CCDC39-206ENST00000489868 TBC1D9Q6ZT07 1266 aa10.82□□□□□ -0.68
CCDC39-206ENST00000489868 CALR3Q96L12 384 aaKnown RBP10.82□□□□□ -0.68
CCDC39-206ENST00000489868 DOLKQ9UPQ8 538 aa10.82□□□□□ -0.68
CCDC39-206ENST00000489868 MRPL14Q6P1L8 145 aaKnown RBP10.81□□□□□ -0.68
CCDC39-206ENST00000489868 CCDC125Q86Z20 511 aa10.81□□□□□ -0.68
CCDC39-206ENST00000489868 OSBPL3Q9H4L5 887 aa10.81□□□□□ -0.68
CCDC39-206ENST00000489868 GMPR2Q9P2T1 348 aaKnown RBP10.81□□□□□ -0.68
CCDC39-206ENST00000489868 ARID3CA6NKF2 412 aa10.8□□□□□ -0.68
CCDC39-206ENST00000489868 SKIP12755 728 aa10.8□□□□□ -0.68
CCDC39-206ENST00000489868 CC2D2BQ6DHV5 1058 aa10.8□□□□□ -0.68
CCDC39-206ENST00000489868 LINC00528Q8N1L1 170 aa10.8□□□□□ -0.68
CCDC39-206ENST00000489868 PURBQ96QR8 312 aaKnown RBP10.8□□□□□ -0.68
CCDC39-206ENST00000489868 ADH1AP07327 375 aa10.79□□□□□ -0.68
CCDC39-206ENST00000489868 OXLD1Q5BKU9 147 aa10.79□□□□□ -0.68
CCDC39-206ENST00000489868 NFATC2IPQ8NCF5 419 aa10.79□□□□□ -0.68
CCDC39-206ENST00000489868 C6orf118Q5T5N4 469 aa10.78□□□□□ -0.68
CCDC39-206ENST00000489868 DEPDC4Q8N2C3 294 aa10.78□□□□□ -0.68
CCDC39-206ENST00000489868 ZFP42Q96MM3 310 aa10.78□□□□□ -0.68
CCDC39-206ENST00000489868 C1orf115Q9H7X2 142 aa10.78□□□□□ -0.68
CCDC39-206ENST00000489868 USP17L5A8MUK1 530 aa10.77□□□□□ -0.69
CCDC39-206ENST00000489868 RELBQ01201 579 aa10.77□□□□□ -0.69
CCDC39-206ENST00000489868 MAP7D1Q3KQU3 841 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms