RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 AMER1Q5JTC6 1135 aaPredicted RBP21.16■□□□□ 0.98
SMIM11A-206ENST00000489469 BCL9LQ86UU0 1499 aa21.15■□□□□ 0.98
SMIM11A-206ENST00000489469 CHRNA2Q15822 529 aa21.15■□□□□ 0.98
SMIM11A-206ENST00000489469 UNC5CLQ8IV45 518 aa21.15■□□□□ 0.98
SMIM11A-206ENST00000489469 BTG4Q9NY30 223 aa21.15■□□□□ 0.98
SMIM11A-206ENST00000489469 RGPD5Q99666 1765 aa21.15■□□□□ 0.98
SMIM11A-206ENST00000489469 TRPC5Q9UL62 973 aaPredicted RBP21.14■□□□□ 0.97
SMIM11A-206ENST00000489469 ZBTB7CA1YPR0 619 aa21.13■□□□□ 0.97
SMIM11A-206ENST00000489469 RGS17Q9UGC6 210 aaPredicted RBP21.13■□□□□ 0.97
SMIM11A-206ENST00000489469 KIF24Q5T7B8 1368 aa21.12■□□□□ 0.97
SMIM11A-206ENST00000489469 CAMTA1Q9Y6Y1 1673 aa21.12■□□□□ 0.97
SMIM11A-206ENST00000489469 MORC1Q86VD1 984 aa21.12■□□□□ 0.97
SMIM11A-206ENST00000489469 RTL1A6NKG5 1358 aa21.11■□□□□ 0.97
SMIM11A-206ENST00000489469 ATRNO75882 1429 aa21.11■□□□□ 0.97
SMIM11A-206ENST00000489469 BLMP54132 1417 aaPredicted RBP21.1■□□□□ 0.97
SMIM11A-206ENST00000489469 MAP3K19Q56UN5 1328 aa21.09■□□□□ 0.97
SMIM11A-206ENST00000489469 COL5A2P05997 1499 aaPredicted RBP21.09■□□□□ 0.97
SMIM11A-206ENST00000489469 DDX10Q13206 875 aaKnown RBP21.09■□□□□ 0.97
SMIM11A-206ENST00000489469 QTRT2Q9H974 415 aaKnown RBP21.09■□□□□ 0.97
SMIM11A-206ENST00000489469 AMPHP49418 695 aa21.08■□□□□ 0.97
SMIM11A-206ENST00000489469 EVA1CP58658 441 aa21.08■□□□□ 0.97
SMIM11A-206ENST00000489469 VPS72Q15906 364 aa21.08■□□□□ 0.97
SMIM11A-206ENST00000489469 IP6K1Q92551 441 aa21.08■□□□□ 0.97
SMIM11A-206ENST00000489469 FAM208AQ9UK61 1670 aaKnown RBP21.07■□□□□ 0.96
SMIM11A-206ENST00000489469 RRS1Q15050 365 aaKnown RBP21.06■□□□□ 0.96
SMIM11A-206ENST00000489469 CC2D1BQ5T0F9 858 aaKnown RBP21.06■□□□□ 0.96
SMIM11A-206ENST00000489469 FLT4P35916 1363 aa21.06■□□□□ 0.96
SMIM11A-206ENST00000489469 SLC4A2P04920 1241 aa21.05■□□□□ 0.96
SMIM11A-206ENST00000489469 RBM6P78332 1123 aaKnown RBP21.05■□□□□ 0.96
SMIM11A-206ENST00000489469 POTEAQ6S8J7 498 aa21.05■□□□□ 0.96
SMIM11A-206ENST00000489469 STRN4Q9NRL3 753 aa21.05■□□□□ 0.96
SMIM11A-206ENST00000489469 AXIN2Q9Y2T1 843 aa21.05■□□□□ 0.96
SMIM11A-206ENST00000489469 PEAK1Q9H792 1746 aa21.04■□□□□ 0.96
SMIM11A-206ENST00000489469 FBLN1P23142 703 aa21.04■□□□□ 0.96
SMIM11A-206ENST00000489469 RXRBP28702 533 aa21.04■□□□□ 0.96
SMIM11A-206ENST00000489469 HOXC9P31274 260 aa21.04■□□□□ 0.96
SMIM11A-206ENST00000489469 TNNT2P45379 298 aaPredicted RBP21.04■□□□□ 0.96
SMIM11A-206ENST00000489469 GJD4Q96KN9 370 aaPredicted RBP21.04■□□□□ 0.96
SMIM11A-206ENST00000489469 WDR17Q8IZU2 1322 aa21.04■□□□□ 0.96
SMIM11A-206ENST00000489469 CCDC9Q9Y3X0 531 aaKnown RBP21.03■□□□□ 0.96
SMIM11A-206ENST00000489469 CRB1P82279 1406 aa21.03■□□□□ 0.96
SMIM11A-206ENST00000489469 SMG6Q86US8 1419 aaKnown RBP21.03■□□□□ 0.96
SMIM11A-206ENST00000489469 INSRP06213 1382 aa21.02■□□□□ 0.96
SMIM11A-206ENST00000489469 POLKQ9UBT6 870 aa21.02■□□□□ 0.96
SMIM11A-206ENST00000489469 ERBB3P21860 1342 aa21.02■□□□□ 0.95
SMIM11A-206ENST00000489469 SPATA31A5Q5VU36 1347 aa21.02■□□□□ 0.95
SMIM11A-206ENST00000489469 SPATA31A7Q8IWB4 1347 aa21.02■□□□□ 0.95
SMIM11A-206ENST00000489469 GLI3P10071 1580 aa21.02■□□□□ 0.95
SMIM11A-206ENST00000489469 CDK12Q9NYV4 1490 aaPredicted RBP21.01■□□□□ 0.95
SMIM11A-206ENST00000489469 CSB-PGBD3P0DP91 1061 aa21.01■□□□□ 0.95
SMIM11A-206ENST00000489469 EMILIN1Q9Y6C2 1016 aa21.01■□□□□ 0.95
SMIM11A-206ENST00000489469 LARP1Q6PKG0 1096 aaKnown RBP21■□□□□ 0.95
SMIM11A-206ENST00000489469 ANKRD24Q8TF21 1146 aa21■□□□□ 0.95
SMIM11A-206ENST00000489469 RNF39Q9H2S5 420 aa21■□□□□ 0.95
SMIM11A-206ENST00000489469 PPM1GO15355 546 aaPredicted RBP20.99■□□□□ 0.95
SMIM11A-206ENST00000489469 TOM1L2Q6ZVM7 507 aa20.99■□□□□ 0.95
SMIM11A-206ENST00000489469 SPATA31A1Q5TZJ5 1347 aa20.99■□□□□ 0.95
SMIM11A-206ENST00000489469 THRAP3Q9Y2W1 955 aaKnown RBP20.98■□□□□ 0.95
SMIM11A-206ENST00000489469 CNGB1Q14028 1251 aaPredicted RBP20.97■□□□□ 0.95
SMIM11A-206ENST00000489469 WNK3Q9BYP7 1800 aa20.97■□□□□ 0.95
SMIM11A-206ENST00000489469 HSP90AB2PQ58FF8 381 aa20.96■□□□□ 0.95
SMIM11A-206ENST00000489469 TCP11L2Q8N4U5 519 aa20.96■□□□□ 0.95
SMIM11A-206ENST00000489469 CARD10Q9BWT7 1032 aa20.96■□□□□ 0.95
SMIM11A-206ENST00000489469 PARD3Q8TEW0 1356 aa20.96■□□□□ 0.95
SMIM11A-206ENST00000489469 RGPD2P0DJD1 1756 aa20.95■□□□□ 0.94
SMIM11A-206ENST00000489469 RALBP1Q15311 655 aa20.95■□□□□ 0.94
SMIM11A-206ENST00000489469 BARGINQ6ZT62 677 aa20.95■□□□□ 0.94
SMIM11A-206ENST00000489469 ONECUT3O60422 494 aaPredicted RBP20.94■□□□□ 0.94
SMIM11A-206ENST00000489469 LTV1Q96GA3 475 aaPredicted RBP20.94■□□□□ 0.94
SMIM11A-206ENST00000489469 NLRP2Q9NX02 1062 aa20.93■□□□□ 0.94
SMIM11A-206ENST00000489469 USP35Q9P2H5 1018 aa20.93■□□□□ 0.94
SMIM11A-206ENST00000489469 THSD7AQ9UPZ6 1657 aa20.93■□□□□ 0.94
SMIM11A-206ENST00000489469 MTHFSP49914 203 aa20.92■□□□□ 0.94
SMIM11A-206ENST00000489469 CDCA7Q9BWT1 371 aaPredicted RBP20.92■□□□□ 0.94
SMIM11A-206ENST00000489469 RGS12O14924 1447 aa20.91■□□□□ 0.94
SMIM11A-206ENST00000489469 PARP4Q9UKK3 1724 aaKnown RBP20.91■□□□□ 0.94
SMIM11A-206ENST00000489469 PPP2R1AP30153 589 aa20.9■□□□□ 0.94
SMIM11A-206ENST00000489469 FAM98CQ17RN3 349 aaKnown RBP20.9■□□□□ 0.94
SMIM11A-206ENST00000489469 BRWD3Q6RI45 1802 aa20.9■□□□□ 0.94
SMIM11A-206ENST00000489469 CFAP53Q96M91 514 aa20.88■□□□□ 0.93
SMIM11A-206ENST00000489469 A0A0G2JS52 829 aa20.87■□□□□ 0.93
SMIM11A-206ENST00000489469 MYT1Q01538 1121 aa20.87■□□□□ 0.93
SMIM11A-206ENST00000489469 EIF4A2Q14240 407 aaKnown RBP20.87■□□□□ 0.93
SMIM11A-206ENST00000489469 SEPT12Q8IYM1 358 aa20.87■□□□□ 0.93
SMIM11A-206ENST00000489469 NBPF6Q5VWK0 638 aa20.86■□□□□ 0.93
SMIM11A-206ENST00000489469 NBPF4Q96M43 638 aa20.86■□□□□ 0.93
SMIM11A-206ENST00000489469 FOXD4L1Q9NU39 408 aa20.86■□□□□ 0.93
SMIM11A-206ENST00000489469 DISP2A7MBM2 1401 aa20.86■□□□□ 0.93
SMIM11A-206ENST00000489469 NCAPD2Q15021 1401 aa20.86■□□□□ 0.93
SMIM11A-206ENST00000489469 PRKRIP1Q9H875 184 aaPredicted RBP20.85■□□□□ 0.93
SMIM11A-206ENST00000489469 RGPD1P0DJD0 1748 aa20.84■□□□□ 0.93
SMIM11A-206ENST00000489469 MYBBP1AQ9BQG0 1328 aaKnown RBP20.84■□□□□ 0.93
SMIM11A-206ENST00000489469 IL2RBP14784 551 aa20.84■□□□□ 0.93
SMIM11A-206ENST00000489469 LRRC37A3O60309 1634 aa20.84■□□□□ 0.93
SMIM11A-206ENST00000489469 COL3A1P02461 1466 aaPredicted RBP20.83■□□□□ 0.93
SMIM11A-206ENST00000489469 DIAPH1O60610 1272 aaKnown RBP20.83■□□□□ 0.93
SMIM11A-206ENST00000489469 ILDR2Q71H61 639 aa20.83■□□□□ 0.93
SMIM11A-206ENST00000489469 EYA1Q99502 592 aa20.83■□□□□ 0.93
SMIM11A-206ENST00000489469 IGSF1Q8N6C5 1336 aa20.82■□□□□ 0.92
SMIM11A-206ENST00000489469 IL13P35225 146 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms