RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 C1QTNF2Q9BXJ5 285 aa8.19□□□□□ -1.1
SSR1-209ENST00000488834 CDV3Q9UKY7 258 aaKnown RBP8.19□□□□□ -1.1
SSR1-209ENST00000488834 TRMT44Q8IYL2 757 aaKnown RBP8.18□□□□□ -1.1
SSR1-209ENST00000488834 OCSTAMPQ9BR26 566 aa8.18□□□□□ -1.1
SSR1-209ENST00000488834 FSHRP23945 695 aa8.17□□□□□ -1.1
SSR1-209ENST00000488834 ADH1CP00326 375 aa8.16□□□□□ -1.1
SSR1-209ENST00000488834 RAB15P59190 212 aa8.16□□□□□ -1.1
SSR1-209ENST00000488834 SEMA3FQ13275 785 aa8.16□□□□□ -1.1
SSR1-209ENST00000488834 ERICH6Q7L0X2 663 aa8.16□□□□□ -1.1
SSR1-209ENST00000488834 MAP4K5Q9Y4K4 846 aa8.16□□□□□ -1.1
SSR1-209ENST00000488834 A6NJR5 290 aa8.15□□□□□ -1.1
SSR1-209ENST00000488834 MCCD1P59942 119 aaPredicted RBP8.15□□□□□ -1.1
SSR1-209ENST00000488834 MPNDQ8N594 471 aa8.15□□□□□ -1.1
SSR1-209ENST00000488834 CDK15Q96Q40 435 aa8.15□□□□□ -1.1
SSR1-209ENST00000488834 KCTD15Q96SI1 283 aaPredicted RBP8.15□□□□□ -1.1
SSR1-209ENST00000488834 NR5A1Q13285 461 aa8.14□□□□□ -1.11
SSR1-209ENST00000488834 NNTQ13423 1086 aa8.14□□□□□ -1.11
SSR1-209ENST00000488834 CRIPAKQ8N1N5 446 aa8.14□□□□□ -1.11
SSR1-209ENST00000488834 SOX11P35716 441 aa8.13□□□□□ -1.11
SSR1-209ENST00000488834 ZMYND15Q9H091 742 aa8.13□□□□□ -1.11
SSR1-209ENST00000488834 GMPR2Q9P2T1 348 aaKnown RBP8.13□□□□□ -1.11
SSR1-209ENST00000488834 NR3C2P08235 984 aa8.11□□□□□ -1.11
SSR1-209ENST00000488834 GRM5P41594 1212 aa8.11□□□□□ -1.11
SSR1-209ENST00000488834 DHX9Q08211 1270 aaKnown RBP8.11□□□□□ -1.11
SSR1-209ENST00000488834 RNF20Q5VTR2 975 aa8.11□□□□□ -1.11
SSR1-209ENST00000488834 ZNF787Q6DD87 383 aa8.11□□□□□ -1.11
SSR1-209ENST00000488834 CCDC116Q8IYX3 515 aa8.11□□□□□ -1.11
SSR1-209ENST00000488834 POM121CA8CG34 1229 aa8.1□□□□□ -1.11
SSR1-209ENST00000488834 AXIN1O15169 862 aa8.1□□□□□ -1.11
SSR1-209ENST00000488834 GIGYF1O75420 1035 aaPredicted RBP8.1□□□□□ -1.11
SSR1-209ENST00000488834 BMP1P13497 986 aa8.1□□□□□ -1.11
SSR1-209ENST00000488834 SMCPP49901 116 aaPredicted RBP8.1□□□□□ -1.11
SSR1-209ENST00000488834 SLFNL1Q499Z3 407 aa8.1□□□□□ -1.11
SSR1-209ENST00000488834 TRIM52Q96A61 297 aa8.1□□□□□ -1.11
SSR1-209ENST00000488834 TRAK2O60296 914 aa8.09□□□□□ -1.11
SSR1-209ENST00000488834 WDR4P57081 412 aaKnown RBP8.09□□□□□ -1.11
SSR1-209ENST00000488834 INTS6LQ5JSJ4 861 aaKnown RBP8.09□□□□□ -1.11
SSR1-209ENST00000488834 FNBP4Q8N3X1 1017 aaPredicted RBP8.09□□□□□ -1.11
SSR1-209ENST00000488834 PGPEP1Q9NXJ5 209 aa8.09□□□□□ -1.11
SSR1-209ENST00000488834 EMILIN1Q9Y6C2 1016 aa8.09□□□□□ -1.11
SSR1-209ENST00000488834 SNRPBP14678 240 aaKnown RBP8.08□□□□□ -1.12
SSR1-209ENST00000488834 HDGFL1Q5TGJ6 251 aa8.08□□□□□ -1.12
SSR1-209ENST00000488834 TRIM46Q7Z4K8 759 aa8.08□□□□□ -1.12
SSR1-209ENST00000488834 SEPT12Q8IYM1 358 aa8.08□□□□□ -1.12
SSR1-209ENST00000488834 ZNF775Q96BV0 537 aaPredicted RBP8.08□□□□□ -1.12
SSR1-209ENST00000488834 KLF16Q9BXK1 252 aaPredicted RBP8.08□□□□□ -1.12
SSR1-209ENST00000488834 ESF1Q9H501 851 aaKnown RBP8.08□□□□□ -1.12
SSR1-209ENST00000488834 CEP126Q9P2H0 1117 aa8.08□□□□□ -1.12
SSR1-209ENST00000488834 ZNF777Q9ULD5 760 aaPredicted RBP8.08□□□□□ -1.12
SSR1-209ENST00000488834 PPP1R26Q5T8A7 1209 aaPredicted RBP8.07□□□□□ -1.12
SSR1-209ENST00000488834 LCE2CQ5TA81 110 aa8.07□□□□□ -1.12
SSR1-209ENST00000488834 RNF135Q8IUD6 432 aa8.07□□□□□ -1.12
SSR1-209ENST00000488834 CALR3Q96L12 384 aaKnown RBP8.07□□□□□ -1.12
SSR1-209ENST00000488834 ATP13A2Q9NQ11 1180 aa8.07□□□□□ -1.12
SSR1-209ENST00000488834 ESPNB1AK53 854 aa8.06□□□□□ -1.12
SSR1-209ENST00000488834 CAPN5O15484 640 aaPredicted RBP8.06□□□□□ -1.12
SSR1-209ENST00000488834 ZIC2O95409 532 aaPredicted RBP8.06□□□□□ -1.12
SSR1-209ENST00000488834 CTC1Q2NKJ3 1217 aa8.06□□□□□ -1.12
SSR1-209ENST00000488834 CCDC125Q86Z20 511 aa8.06□□□□□ -1.12
SSR1-209ENST00000488834 GLMNQ92990 594 aa8.06□□□□□ -1.12
SSR1-209ENST00000488834 ERVH48-1M5A8F1 160 aa8.05□□□□□ -1.12
SSR1-209ENST00000488834 ITPKCQ96DU7 683 aa8.05□□□□□ -1.12
SSR1-209ENST00000488834 ALG2Q9H553 416 aa8.05□□□□□ -1.12
SSR1-209ENST00000488834 ZFAND3Q9H8U3 227 aa8.05□□□□□ -1.12
SSR1-209ENST00000488834 PCDHB11Q9Y5F2 797 aa8.05□□□□□ -1.12
SSR1-209ENST00000488834 TIMP2P16035 220 aa8.04□□□□□ -1.12
SSR1-209ENST00000488834 TMPRSS4Q9NRS4 437 aa8.04□□□□□ -1.12
SSR1-209ENST00000488834 DOLKQ9UPQ8 538 aa8.04□□□□□ -1.12
SSR1-209ENST00000488834 CYLDQ9NQC7 956 aa8.03□□□□□ -1.12
SSR1-209ENST00000488834 UPP2O95045 317 aa8.02□□□□□ -1.13
SSR1-209ENST00000488834 MYCP01106 439 aaPredicted RBP8.02□□□□□ -1.13
SSR1-209ENST00000488834 SKIP12755 728 aa8.02□□□□□ -1.13
SSR1-209ENST00000488834 ZNF784Q8NCA9 323 aaPredicted RBP8.02□□□□□ -1.13
SSR1-209ENST00000488834 TIMELESSQ9UNS1 1208 aa8.02□□□□□ -1.13
SSR1-209ENST00000488834 OXLD1Q5BKU9 147 aa8.01□□□□□ -1.13
SSR1-209ENST00000488834 LCE2AQ5TA79 106 aaPredicted RBP8.01□□□□□ -1.13
SSR1-209ENST00000488834 ADAMTS19Q8TE59 1207 aa8.01□□□□□ -1.13
SSR1-209ENST00000488834 MAP7D1Q3KQU3 841 aa8□□□□□ -1.13
SSR1-209ENST00000488834 PLPP7Q8NBV4 271 aa8□□□□□ -1.13
SSR1-209ENST00000488834 CCDC85AQ96PX6 553 aaPredicted RBP8□□□□□ -1.13
SSR1-209ENST00000488834 ARID3CA6NKF2 412 aa7.99□□□□□ -1.13
SSR1-209ENST00000488834 PIK3CDO00329 1044 aa7.99□□□□□ -1.13
SSR1-209ENST00000488834 CBLBQ13191 982 aa7.99□□□□□ -1.13
SSR1-209ENST00000488834 CC2D2BQ6DHV5 1058 aa7.99□□□□□ -1.13
SSR1-209ENST00000488834 SOBPA7XYQ1 873 aa7.98□□□□□ -1.13
SSR1-209ENST00000488834 C11orf95C9JLR9 678 aaPredicted RBP7.98□□□□□ -1.13
SSR1-209ENST00000488834 USP4Q13107 963 aa7.98□□□□□ -1.13
SSR1-209ENST00000488834 SCARF1Q14162 830 aa7.98□□□□□ -1.13
SSR1-209ENST00000488834 PHTF2Q8N3S3 785 aa7.98□□□□□ -1.13
SSR1-209ENST00000488834 NFATC2IPQ8NCF5 419 aa7.98□□□□□ -1.13
SSR1-209ENST00000488834 SIRT1Q96EB6 747 aa7.98□□□□□ -1.13
SSR1-209ENST00000488834 CCDC97Q96F63 343 aaPredicted RBP7.98□□□□□ -1.13
SSR1-209ENST00000488834 TRIM47Q96LD4 638 aa7.98□□□□□ -1.13
SSR1-209ENST00000488834 BMP2P12643 396 aa7.97□□□□□ -1.13
SSR1-209ENST00000488834 EML3Q32P44 896 aa7.97□□□□□ -1.13
SSR1-209ENST00000488834 C6orf118Q5T5N4 469 aa7.97□□□□□ -1.13
SSR1-209ENST00000488834 CDCA7Q9BWT1 371 aaPredicted RBP7.97□□□□□ -1.13
SSR1-209ENST00000488834 USP17L5A8MUK1 530 aa7.96□□□□□ -1.14
SSR1-209ENST00000488834 ERVK-9P63128 1117 aa7.96□□□□□ -1.14
SSR1-209ENST00000488834 RELBQ01201 579 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms